This is an alphabetical list of fungal taxa as recorded from South Africa. Currently accepted names have been appended.
Genus: Echidnodella Theiss. & Syd. 1918
Genus: Echidnodes Theiss. & Syd. 1918
Genus: Ectotrichophyton Castell. & Chalm. 1919 accepted as Trichophyton Malmsten, (1848)
Genus: Elmerococcum Theiss. & Syd. 1915, accepted as Botryosphaeria Ces. & De Not., (1863)
Genus: Elsinoë Racib. 1900
Genus: Empusa Cohn 1855
Genus: Endocarpiscum Nyl. 1864 (Lichens)
Genus: Endocarpon Hedw. 1789
Genus: Endodermophyton Castell. 1910 accepted as Trichophyton Malmsten, (1848)
Genus: Endodothella Theiss. & Syd. 1915 accepted as Phyllachora Nitschke ex Fuckel, (1870)
Order: Endomycetales [1] Gäum. & C.W. Dodge 1928
Family: Endomycetaceae [1] J. Schröt. 1893
Genus: Endophyllum Lév. 1826
Genus: Endopyrenium Flot. 1855 accepted as Catapyrenium Flot., (1850)
Genus: Englerula Henn. 1904
Genus: Englerulaster Höhn. 1910 accepted as Asterina Lév., (1845)
Genus: Enterographa Fée 1825 (Lichens)
Genus: Enterostigma Müll. Arg. 1885 accepted as Thelotrema Ach., (1803)
Genus: Entoloma P. Kumm. 1871
Genus Entomophaga A. Batko 1964,
Genus: Entomophthora Fresen. 1856
Order: Entomophthorales [1] G. Winter 1880
Family: Entomophthoraceae [1] A.B. Frank 1874
Genus: Entomosporium cLév. 1857 accepted as Diplocarpon F.A. Wolf, (1912)
Genus: Entopeltis Höhn. 1910 accepted as Vizella Sacc., (1883)
Genus: Entyloma de Bary 1874
Family: Ephebaceae [1] Th. Fr. 1861
Genus: Ephebe Fr. 1825
Genus: Ephelis Fr. 1849
Genus: Epichloë (Fr.) Tul. & C. Tul. 1865
Genus: Epicoccum Link 1816
Genus: Epidermophyton Sabour. 1907
Genus: Epistigme Syd. 1924
Genus: Epochnium Link 1809 accepted as Monilinia Honey, (1928)
Family: Eremascaceae [1] Engl. & E. Gilg 1924
Eremascaceae imperfectae [1] C.W. Dodge 1935
Genus: Erikssonia Penz. & Sacc. 1898
Genus: Eriomycopsis Speg. 1910
Genus: Erostella (Sacc.) Sacc. 1906 accepted as Phaeoacremonium W. Gams, Crous & M.J. Wingf., (1996)
Family: Erysiphaceae [1] Tul. & C. Tul. 1861
Genus: Erysiphe R. Hedw. ex DC. 1805
Genus: Eubelonis Clem., (1909) accepted as Calycina Nees ex Gray, (1821)
Genus: Eucantharomyces Thaxt. 1895
Genus: Eudarluca Speg. 1908
Genus: Eudimeriolum Speg. 1912
Genus: Eumitra *
Genus: Eupelte Syd. 1924
Family: Eurotiaceae [2] Clem. & Shear 1931
Genus: Eurotium Link 1809
Genus: Euryachora Fuckel 1870
Genus: Eutypella (Nitschke) Sacc. 1875
Genus: Evernia Ach. 1809 (Lichens)
Genus: Exidia Fr. 1822
Genus: Exoascus Fuckel 1860
Family: Exobasidiaceae [2] J. Schröt. 1888
Genus: Exobasidium Woronin 1867
Genus: Exosporium Link 1809
Prillieuxina is a genus of fungi in the Asterinaceae family. The relationship of this taxon to other taxa within the class is unknown, and it has not yet been placed with certainty into any order.
Myriangium is a genus of fungi within the family Myriangiaceae.