MTMR9

MTMR9
Identifiers
Aliases	MTMR9 , C8orf9, LIP-STYX, MTMR8, myotubularin related protein 9
External IDs	OMIM: 606260; MGI: 2442842; HomoloGene: 9148; GeneCards: MTMR9; OMA:MTMR9 - orthologs
Gene location (Human) Chr. Chromosome 8 (human) [1] Band 8p23.1 Start 11,284,816 bp [1] End 11,328,146 bp [1]
Gene location (Mouse) Chr. Chromosome 14 (mouse) [2] Band 14|14 D1 Start 63,757,100 bp [2] End 63,781,431 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in endothelial cell Brodmann area 46 pars compacta Region I of hippocampus proper cerebellar vermis pons secondary oocyte pars reticulata Brodmann area 23 middle temporal gyrus Top expressed in seminiferous tubule vestibular membrane of cochlear duct ganglionic eminence superior cervical ganglion superior frontal gyrus barrel cortex dentate gyrus of hippocampal formation granule cell ciliary body retinal pigment epithelium ventricular zone More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding enzyme regulator activity phosphatidylinositol-3-phosphatase activity phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity protein phosphatase binding Cellular component cytosol cytoplasm protein-containing complex endoplasmic reticulum plasma membrane membrane ruffle membrane cell projection perinuclear region of cytoplasm Biological process phosphatidylinositol biosynthetic process dephosphorylation negative regulation of autophagy positive regulation of phosphatase activity protein stabilization regulation of phosphatidylinositol dephosphorylation endocytosis Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 66036 210376 Ensembl ENSG00000104643 ENSG00000285032 ENSMUSG00000035078 UniProt Q96QG7 Q9Z2D0 RefSeq (mRNA) NM_015458 NM_177594 RefSeq (protein) NP_056273 NP_808262 Location (UCSC) Chr 8: 11.28 – 11.33 Mb Chr 14: 63.76 – 63.78 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Myotubularin-related protein 9 is a protein that in humans is encoded by the MTMR9 gene. ^{[5] [6] [7] [8]}

Function

This gene encodes a myotubularin-related protein that is atypical to most other members of the myotubularin-related protein family because it has no dual-specificity phosphatase domain. The encoded protein contains a double-helical motif similar to the SET interaction domain, which is thought to have a role in the control of cell proliferation. In mouse, a protein similar to the encoded protein binds with MTMR7, and together they dephosphorylate phosphatidylinositol 3-phosphate and inositol 1,3-bisphosphate. ^[8]

Interactions

MTMR9 has been shown to interact with MTMR6. ^[7]

References

1. ENSG00000285032 GRCh38: Ensembl release 89: ENSG00000104643, ENSG00000285032 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000035078 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Appel S, Reichwald K, Zimmermann W, Reis A, Rosenthal A, Hennies HC (Jul 2001). "Identification and localization of a new human myotubularin-related protein gene, mtmr8, on 8p22-p23". Genomics. 75 (1–3): 6–8. doi:10.1006/geno.2001.6591. PMID   11472061.
6. Appel S, Filter M, Reis A, Hennies HC, Bergheim A, Ogilvie E, Arndt S, Simmons A, Lovett M, Hide W, Ramsay M, Reichwald K, Zimmermann W, Rosenthal A (Mar 2002). "Physical and transcriptional map of the critical region for keratolytic winter erythema (KWE) on chromosome 8p22-p23 between D8S550 and D8S1759". Eur. J. Hum. Genet. 10 (1): 17–25. doi: 10.1038/sj.ejhg.5200750 . PMID   11896452.
7. Mochizuki Y, Majerus PW (Aug 2003). "Characterization of myotubularin-related protein 7 and its binding partner, myotubularin-related protein 9". Proc. Natl. Acad. Sci. U.S.A. 100 (17): 9768–73. Bibcode:2003PNAS..100.9768M. doi: 10.1073/pnas.1333958100 . PMC   187840 . PMID   12890864.
8. "Entrez Gene: MTMR9 myotubularin related protein 9".

Further reading

• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (1996). "A "double adaptor" method for improved shotgun library construction". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID   8619474.
• Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W, Ricafrente JY, Wentland MA, Lennon G, Gibbs RA (1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC   139146 . PMID   9110174.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Wang JC, Radford DM, Holt MS, Helms C, Goate A, Brandt W, Parik M, Phillips NJ, DeSchryver K, Schuh ME, Fair KL, Ritter JH, Marshall P, Donis-Keller H (1999). "Sequence-ready contig for the 1.4-cM ductal carcinoma in situ loss of heterozygosity region on chromosome 8p22-p23". Genomics. 60 (1): 1–11. doi:10.1006/geno.1999.5905. PMID   10458905.
• Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID   16189514. S2CID   4427026.