A hypha is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium.
Zygomycota, or zygote fungi, is a former division or phylum of the kingdom Fungi. The members are now part of two phyla: the Mucoromycota and Zoopagomycota. Approximately 1060 species are known. They are mostly terrestrial in habitat, living in soil or on decaying plant or animal material. Some are parasites of plants, insects, and small animals, while others form symbiotic relationships with plants. Zygomycete hyphae may be coenocytic, forming septa only where gametes are formed or to wall off dead hyphae. Zygomycota is no longer recognised as it was not believed to be truly monophyletic.
In cooking, syrup is a condiment that is a thick, viscous liquid consisting primarily of a solution of sugar in water, containing a large amount of dissolved sugars but showing little tendency to deposit crystals. In its concentrated form, its consistency is similar to that of molasses. The viscosity arises from the multiple hydrogen bonds between the dissolved sugar, which has many hydroxyl (OH) groups.
Ethanol fermentation, also called alcoholic fermentation, is a biological process which converts sugars such as glucose, fructose, and sucrose into cellular energy, producing ethanol and carbon dioxide as by-products. Because yeasts perform this conversion in the absence of oxygen, alcoholic fermentation is considered an anaerobic process. It also takes place in some species of fish where it provides energy when oxygen is scarce.
Kilju is the Finnish word for home made alcoholic beverage typically made of sugar, yeast, and water.
Lignocellulose refers to plant dry matter (biomass), so called lignocellulosic biomass. It is the most abundantly available raw material on the Earth for the production of biofuels. It is composed of two kinds of carbohydrate polymers, cellulose and hemicellulose, and an aromatic-rich polymer called lignin. Any biomass rich in cellulose, hemicelluloses, and lignin are commonly referred to as lignocellulosic biomass. Each component has a distinct chemical behavior. Being a composite of three very different components makes the processing of lignocellulose challenging. The evolved resistance to degradation or even separation is referred to as recalcitrance. Overcoming this recalcitrance to produce useful, high value products requires a combination of heat, chemicals, enzymes, and microorganisms. These carbohydrate-containing polymers contain different sugar monomers and they are covalently bound to lignin.
Mortierella species are soil fungi belonging to the order Mortierellales within the subphylum Mortierellomycotina. The widespread genus contains about 85 species.
Zymomonas mobilis is a Gram negative, facultative anaerobic, non-sporulating, polarly-flagellated, rod-shaped bacterium. It is the only species found in the genus Zymomonas. It has notable bioethanol-producing capabilities, which surpass yeast in some aspects. It was originally isolated from alcoholic beverages like the African palm wine, the Mexican pulque, and also as a contaminant of cider and beer in European countries.
The Pasteur effect describes how available oxygen inhibits ethanol fermentation, driving yeast to switch toward aerobic respiration for increased generation of the energy carrier adenosine triphosphate (ATP). More generally, in the medical literature, the Pasteur effect refers to how the cellular presence of oxygen causes in cells a decrease in the rate of glycolysis and also a suppression of lactate accumulation. The effect occurs in animal tissues, as well as in microorganisms belonging to the fungal kingdom.
Trichoderma reesei is a mesophilic and filamentous fungus. It is an anamorph of the fungus Hypocrea jecorina. T. reesei can secrete large amounts of cellulolytic enzymes. Microbial cellulases have industrial application in the conversion of cellulose, a major component of plant biomass, into glucose.
Mucor mucedo, commonly known as the common pinmould, is a fungal plant pathogen and member of the phylum Mucoromycota and the genus Mucor. Commonly found on soil, dung, water, plants and moist foods, Mucor mucedo is a saprotrophic fungus found world-wide with 85 known strains. It is often mistaken for Rhizopus rots on fruits due to similar mould growth shape and colour. Contrastingly, however, Mucor mucedo is found to grow on a wide range of stored grains and plants, including cucumber and tomato. Discovered in Italy in 1729 by P.A. Micheli and later noted by Carl Linnaeus in 1753 in the Species Plantarum, Mucor mucedo was originally classified as Mucor vulgaris by Micheli but later classified synonymous under name Mucor mucedo. The species was redescribed as Ascophora mucedo by H.J. Tode in 1790 but this type resided in a stoloniferous habitat and was later made the type of new genus Rhizopus.
Mucor racemosus is a rapidly growing, weedy mould belonging to the division Mucoromycota. It is one of the earliest fungi to be grown in pure culture and was first isolated in 1886. It has a worldwide distribution and colonizes many habitats such as vegetational products, soil and houses. The fungus is mostly known for its ability to exhibit both filamentous and yeast-like morphologies, often referred to as dimorphism. Stark differences are seen in both forms and conditions of the environment heavily affect the phases of the M. racemosus. Like many fungi, it also reproduces both sexually and asexually. The dimorphic capacity of this species has been proposed as an important factor in its pathogenicity and has enhanced the industrial importance. This species is considered an opportunistic pathogen, generally limited to immunocompromised individuals. It also been associated with allergy and inflammations of facial sinuses. Its association with allergy has made it a common fungus used in allergen medical testing. Industrial use of the fungus is in the production of enzymes and the manufacture of certain dairy foods.
D-Xylose is a five-carbon aldose that can be catabolized or metabolized into useful products by a variety of organisms.
A fungus is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as one of the traditional eukaryotic kingdoms, along with Animalia, Plantae and either Protista or Protozoa and Chromista.
Scheffersomyces stipitis is a species of yeast, belonging to the "CUG Clade" of ascomycetous yeasts. This is a group of fungi that substitute serine for leucine when the CUG codon is encountered. S. stipitis is distantly related to brewer's yeast, Saccharomyces cerevisiae, which uses the conventional codon system. Found, among other places, in the guts of passalid beetles, S. stipitis is capable of both aerobic and oxygen limited fermentation, and has the highest known natural ability of any yeast to directly ferment xylose, converting it to ethanol, a potentially economically valuable trait. Xylose is a hemicellulosic sugar found in all angiosperm plants. As such xylose constitutes the second most abundant carbohydrate moiety in nature. Xylose can be produced from wood or agricultural residues through auto- or acid hydrolysis. Ethanol production from such lignocellulosic residues does not compete with food production through the consumption of grain.
Brettanomyces claussenii is a wild yeast of the genus Brettanomyces which has a negative Pasteur effect. It and Brettanomyces anomalus share identical mtDNA. In the wild, it is found on the skins of fruit. It has been shown to be useful for wine and beer fermentation as well as ethanol production.
Mucor plumbeus is a fungus in the family Mucoraceae that is very common, abundant and distributed worldwide. Mucor plumbeus is not known to be a plant or animal pathogen; however it is able to elicit an immune response in humans by activating the complement system. This species is commonly found in various types of soils over a range of pH, although alkaline soils seem more conducive to its growth. It is also known from the roots of wheat, oat and barley. In addition, M. plumbeus is a common fungal contaminant of indoor built environments. This species shares many similarities with M. racemosus, another fungus that belongs to the family Mucoraceae which is known to cause mucormycosis. Mucor plumbeus is a common spoilage agent of cheese, apples, apple cider and yogurt.
Mucor circinelloides is a dimorphic fungus belonging to the Order Mucorales. It has a worldwide distribution, found mostly in soil, dung and root vegetables. This species is described as not known to be able to produce mycotoxins, however it has been frequently reported to infect animals such as cattle and swine, as well as fowl, platypus and occasionally humans. Ketoacidotic patients are particularly at risk for infection by M. circinelloides.
Eckhard Boles is a German microbiologist and biotechnologist. Since 2002 he is professor of microbiology at the Goethe University Frankfurt with a focus on the physiology and genetics of lower eukaryotes. He works mainly on the optimization of yeasts for industrial biotechnology.
Mucoromycota is a division within the kingdom fungi. It includes a diverse group of various molds, including the common bread molds Mucor and Rhizopus. It is a sister phylum to Dikarya.
