SSBP3

SSBP3
Identifiers
Aliases	SSBP3 , CSDP, SSDP, SSDP1, single stranded DNA binding protein 3
External IDs	OMIM: 607390 MGI: 1919725 HomoloGene: 23411 GeneCards: SSBP3
Gene location (Human) Chr. Chromosome 1 (human) [1] Band 1p32.3 Start 54,225,433 bp [1] End 54,413,479 bp [1]
Gene location (Mouse) Chr. Chromosome 4 (mouse) [2] Band 4|4 C7 Start 106,767,898 bp [2] End 106,906,891 bp [2]
RNA expression pattern Bgee Top expressed in left coronary artery ovary superior frontal gyrus prefrontal cortex More reference expression data BioGPS More reference expression data
Gene ontology Molecular function single-stranded DNA binding DNA binding GO:0001948 protein binding GO:0000980 RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001077, GO:0001212, GO:0001213, GO:0001211, GO:0001205 DNA-binding transcription activator activity, RNA polymerase II-specific Cellular component nucleus protein-containing complex Biological process midbrain-hindbrain boundary initiation positive regulation of transcription, DNA-templated prechordal plate formation head morphogenesis positive regulation of anterior head development regulation of transcription, DNA-templated hematopoietic progenitor cell differentiation transcription, DNA-templated positive regulation of cell population proliferation transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II head development protein-containing complex assembly Sources:Amigo / QuickGO
Orthologs
Species	Human	Mouse
Entrez	23648	72475
Ensembl	ENSG00000157216	ENSMUSG00000061887
UniProt	Q9BWW4	Q9D032
RefSeq (mRNA)	NM_001009955 NM_018070 NM_145716	NM_023672 NM_198438 NM_001355532
RefSeq (protein)	NP_001009955 NP_060540 NP_663768	NP_076161 NP_940840 NP_001342461
Location (UCSC)	Chr 1: 54.23 – 54.41 Mb	Chr 4: 106.77 – 106.91 Mb
PubMed search	[3]	[4]
Wikidata
View/Edit Human View/Edit Mouse

Single-stranded DNA-binding protein 3 is a protein that in humans is encoded by the SSBP3 gene. ^{[5] [6]}

References

1. GRCh38: Ensembl release 89: ENSG00000157216 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000061887 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Castro P, Liang H, Liang JC, Nagarajan L (July 2002). "A novel, evolutionarily conserved gene family with putative sequence-specific single-stranded DNA-binding activity". Genomics. 80 (1): 78–85. doi:10.1006/geno.2002.6805. PMID   12079286.
6. "Entrez Gene: SSBP3 single stranded DNA binding protein 3".

Further reading

• Wu L (January 2006). "Structure and functional characterization of single-strand DNA binding protein SSDP1: carboxyl-terminal of SSDP1 has transcription activity". Biochemical and Biophysical Research Communications. 339 (3): 977–84. doi:10.1016/j.bbrc.2005.11.098. PMID   16325762.
• Chen L, Segal D, Hukriede NA, Podtelejnikov AV, Bayarsaihan D, Kennison JA, Ogryzko VV, Dawid IB, Westphal H (October 2002). "Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development". Proceedings of the National Academy of Sciences of the United States of America. 99 (22): 14320–5. Bibcode:2002PNAS...9914320C. doi: 10.1073/pnas.212532399 . PMC   137882 . PMID   12381786.
• Raval-Fernandes S, Kickhoefer VA, Rome LH (September 1999). "Cloning of a cDNA encoding a sequence-specific single-stranded-DNA-binding protein from Rattus norvegicus". Gene. 237 (1): 201–7. doi:10.1016/S0378-1119(99)00289-9. PMID   10524251.
• Adams MD, Kerlavage AR, Fleischmann RD, Fuldner RA, Bult CJ, Lee NH, Kirkness EF, Weinstock KG, Gocayne JD, White O (September 1995). "Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence". Nature. 377 (6547 Suppl): 3–174. PMID   7566098.