SSBP3

SSBP3
Identifiers
Aliases	SSBP3 , CSDP, SSDP, SSDP1, single stranded DNA binding protein 3
External IDs	OMIM: 607390; MGI: 1919725; HomoloGene: 23411; GeneCards: SSBP3; OMA:SSBP3 - orthologs
Gene location (Human) Chr. Chromosome 1 (human) [1] Band 1p32.3 Start 54,225,433 bp [1] End 54,413,479 bp [1]
Gene location (Mouse) Chr. Chromosome 4 (mouse) [2] Band 4|4 C7 Start 106,767,898 bp [2] End 106,906,891 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in left ovary popliteal artery tibial arteries right ovary prefrontal cortex anterior cingulate cortex right frontal lobe canal of the cervix ectocervix right coronary artery Top expressed in Rostral migratory stream genital tubercle tail of embryo primary visual cortex ventricular zone superior frontal gyrus epiblast cerebellar cortex ganglionic eminence ascending aorta More reference expression data BioGPS More reference expression data
Gene ontology Molecular function single-stranded DNA binding DNA binding protein binding RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA-binding transcription activator activity, RNA polymerase II-specific Cellular component nucleus protein-containing complex Biological process midbrain-hindbrain boundary initiation positive regulation of transcription, DNA-templated prechordal plate formation head morphogenesis positive regulation of anterior head development regulation of transcription, DNA-templated hematopoietic progenitor cell differentiation transcription, DNA-templated positive regulation of cell population proliferation transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II head development protein-containing complex assembly Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 23648 72475 Ensembl ENSG00000157216 ENSMUSG00000061887 UniProt Q9BWW4 Q9D032 RefSeq (mRNA) NM_001009955 NM_018070 NM_145716 NM_023672 NM_198438 NM_001355532 RefSeq (protein) NP_001009955 NP_060540 NP_663768 NP_076161 NP_940840 NP_001342461 Location (UCSC) Chr 1: 54.23 – 54.41 Mb Chr 4: 106.77 – 106.91 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Single-stranded DNA-binding protein 3 is a protein that in humans is encoded by the SSBP3 gene. ^{[5] [6]}

References

1. GRCh38: Ensembl release 89: ENSG00000157216 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000061887 – Ensembl, May 2017
3. '"`UNIQ--templatestyles-00000006-QINU`"' "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. '"`UNIQ--templatestyles-00000008-QINU`"' "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Castro P, Liang H, Liang JC, Nagarajan L (July 2002). "A novel, evolutionarily conserved gene family with putative sequence-specific single-stranded DNA-binding activity". Genomics. 80 (1): 78–85. doi:10.1006/geno.2002.6805. PMID   12079286.
6. "Entrez Gene: SSBP3 single stranded DNA binding protein 3".

Further reading

• Wu L (January 2006). "Structure and functional characterization of single-strand DNA binding protein SSDP1: carboxyl-terminal of SSDP1 has transcription activity". Biochemical and Biophysical Research Communications. 339 (3): 977–84. doi:10.1016/j.bbrc.2005.11.098. PMID   16325762.
• Chen L, Segal D, Hukriede NA, Podtelejnikov AV, Bayarsaihan D, Kennison JA, Ogryzko VV, Dawid IB, Westphal H (October 2002). "Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development". Proceedings of the National Academy of Sciences of the United States of America. 99 (22): 14320–5. Bibcode:2002PNAS...9914320C. doi: 10.1073/pnas.212532399 . PMC   137882 . PMID   12381786.
• Raval-Fernandes S, Kickhoefer VA, Rome LH (September 1999). "Cloning of a cDNA encoding a sequence-specific single-stranded-DNA-binding protein from Rattus norvegicus". Gene. 237 (1): 201–7. doi:10.1016/S0378-1119(99)00289-9. PMID   10524251.
• Adams MD, Kerlavage AR, Fleischmann RD, Fuldner RA, Bult CJ, Lee NH, Kirkness EF, Weinstock KG, Gocayne JD, White O (September 1995). "Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence". Nature. 377 (6547 Suppl): 3–174. PMID   7566098.