Gemmiger

Gemmiger
Scientific classification
Domain:	Bacteria
Kingdom:	Bacillati
Phylum:	Bacillota
Class:	Clostridia
Order:	Oscillospirales
Family:	Oscillospiraceae
Genus:	Gemmiger Gossling and Moore 1975 [1]
Type species
Gemmiger formicilis Gossling and Moore 1975 (Approved Lists 1980) [2]
Species [3] [4] [5]
See text
Synonyms
"Ca. Cibionibacter" corrig. Pasolli et al. 2019 SubdoligranulumHolmstrøm et al. 2004

Gemmiger is a genus of bacteria from the family Oscillospiraceae. ^{[1] [6]}

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) ^[2] and National Center for Biotechnology Information (NCBI) ^[4]

16S rRNA based LTP_10_2024 [7] [8] [9]

120 marker proteins based GTDB 09-RS220 [10] [11] [12]

Gemmiger G. gallinarum G. formicilis Subdoligranulum variabile

Gemmiger "Ca. G. faecavium" Gilroy et al. 2021 G. gallinarumZenner et al. 2021 "Ca. G. faecigallinarum" Gilroy et al. 2 "Ca. G. stercorigallinarum" Gilroy et al. 2 "Ca. Cibionibacter qucibialis" corrig. Pasolli et al. 2019 "Ca. G. avicola" Gilroy et al. 2021 "Ca. G. stercoravium" Gilroy et al. 2021 "Ca. G. stercoripullorum" Gilroy et al. 2021 G. formicilis Gossling & Moore 1975 "Ca. G. avistercoris" Gilroy et al. 2021 "Ca. G. excrementipullorum" Gilroy et al. 2021 "Ca. G. excrementavium" Gilroy et al. 2021 "Ca. G. excrementigallinarum" Gilroy et al. 2021 Subdoligranulum variabileHolmstrøm et al. 2004

See also

• List of bacterial orders
• List of bacteria genera

References

1. Gossling J, Moore WE (1975). "Gemmiger formicilis, n.gen., n.sp., an Anaerobic Budding Bacterium from Intestines". International Journal of Systematic and Evolutionary Microbiology. 25: 202–207. doi: 10.1099/00207713-25-2-202 .
2. A.C. Parte; et al. "Gemmiger". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
3. UniProt Taxonomy
4. Sayers; et al. "Gemmiger". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
5. Gossling J (2015). "Gemmiger". In Whitman WB, DeVos P, Dedysh S, Hedlund B, Kämpfer P, Rainey F, Trujillo ME, Bowman JP, Brown DR, Glöckner FO, Oren A, Paster BJ, Wade W, Ward N, Busse HJ, Reysenbach AL (eds.). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Inc., in association with Bergey's Manual Trust. doi:10.1002/9781118960608.gbm00819. ISBN   978-1-118-96060-8.
6. Yarza, Pablo; Spröer, Cathrin; Swiderski, Jolantha; Mrotzek, Nicole; Spring, Stefan; Tindall, Brian J.; et al. (2013). "Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names". Systematic and Applied Microbiology. 36 (1): 69–73. doi:10.1016/j.syapm.2012.12.006. hdl: 10261/123750 . ISSN   0723-2020. PMID   23410935.
7. "The LTP" . Retrieved 10 December 2024.
8. "LTP_all tree in newick format" . Retrieved 10 December 2024.
9. "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
10. "GTDB release 09-RS220". Genome Taxonomy Database . Retrieved 10 May 2024.
11. "bac120_r220.sp_labels". Genome Taxonomy Database . Retrieved 10 May 2024.
12. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2024.