Kyrpidia | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Bacillota |
Class: | Bacilli |
Order: | Bacillales |
Family: | Alicyclobacillaceae |
Genus: | Kyrpidia Klenk et al 2010 |
Type species | |
Kyrpidia tusciae Klenk et al 2010 | |
Species | |
Kyrpidia is a genus of Gram-positive, rod-shaped, thermophilic, spore-forming bacteria.
Bacillus tusciae was first described in 1984, and had been isolated from a geothermal area in Tuscany, Italy. It was placed within the genus Bacillus at that time. Further work on the organism led to the creation of a new genus, Kyrpidia, in 2010. The genus was "named in honor of Nikolaos C. Kyrpides, a Greek-American genomics scientist, who co-initiated the Genomic Encyclopedia of Archaea and Bacteria." K. tusciae is the type species for the genus. [1] [2]
Both species of Kyrpidia have been isolated from areas of high volcanic activity in Tuscany and the Azores. The optimum temperature for growth for both members of the genus is approximately 55 °C. [3] [4]
The Thermomicrobia is a group of thermophilic green non-sulfur bacteria. Based on species Thermomicrobium roseum and Sphaerobacter thermophilus, this bacteria class has the following description:
Thermus is a genus of thermophilic bacteria. It is one of several bacteria belonging to the Deinococcota phylum. Thermus species can be distinguished from other genera in the family Thermaceae as well as all other bacteria by the presence of eight conserved signature indels (CSIs) found in proteins such as adenylate kinase and replicative DNA helicase as well as 14 conserved signature proteins (CSPs) that are exclusively shared by members of this genus.
Sulfur-reducing bacteria are microorganisms able to reduce elemental sulfur (S0) to hydrogen sulfide (H2S). These microbes use inorganic sulfur compounds as electron acceptors to sustain several activities such as respiration, conserving energy and growth, in absence of oxygen. The final product of these processes, sulfide, has a considerable influence on the chemistry of the environment and, in addition, is used as electron donor for a large variety of microbial metabolisms. Several types of bacteria and many non-methanogenic archaea can reduce sulfur. Microbial sulfur reduction was already shown in early studies, which highlighted the first proof of S0 reduction in a vibrioid bacterium from mud, with sulfur as electron acceptor and H
2 as electron donor. The first pure cultured species of sulfur-reducing bacteria, Desulfuromonas acetoxidans, was discovered in 1976 and described by Pfennig Norbert and Biebel Hanno as an anaerobic sulfur-reducing and acetate-oxidizing bacterium, not able to reduce sulfate. Only few taxa are true sulfur-reducing bacteria, using sulfur reduction as the only or main catabolic reaction. Normally, they couple this reaction with the oxidation of acetate, succinate or other organic compounds. In general, sulfate-reducing bacteria are able to use both sulfate and elemental sulfur as electron acceptors. Thanks to its abundancy and thermodynamic stability, sulfate is the most studied electron acceptor for anaerobic respiration that involves sulfur compounds. Elemental sulfur, however, is very abundant and important, especially in deep-sea hydrothermal vents, hot springs and other extreme environments, making its isolation more difficult. Some bacteria – such as Proteus, Campylobacter, Pseudomonas and Salmonella – have the ability to reduce sulfur, but can also use oxygen and other terminal electron acceptors.
The Alicyclobacillaceae are a family of Gram-positive bacteria. All members of this family are aerobic and form endospores.
Hydrogen-oxidizing bacteria are a group of facultative autotrophs that can use hydrogen as an electron donor. They can be divided into aerobes and anaerobes. The former use hydrogen as an electron donor and oxygen as an acceptor while the latter use sulphate or nitrogen dioxide as electron acceptors. Species of both types have been isolated from a variety of environments, including fresh waters, sediments, soils, activated sludge, hot springs, hydrothermal vents and percolating water.
In taxonomy, Acidianus is a genus of the Sulfolobaceae.
Hydrogenobacter thermophilus is an extremely thermophilic, straight rod (bacillus) bacterium. TK-6 is the type strain for this species. It is a Gram negative, non-motile, obligate chemolithoautotroph. It belongs to one of the earliest branching order of Bacteria. H. thermophilus TK-6 lives in soil that contains hot water. It was one of the first hydrogen oxidizing bacteria described leading to the discovery, and subsequent examination of many unique proteins involved in its metabolism. Its discovery contradicted the idea that no obligate hydrogen oxidizing bacteria existed, leading to a new understanding of this physiological group. Additionally, H. thermophilus contains a fatty acid composition that had not been observed before.
Thermothrix azorensis is a Gram-negative, facultatively chemolithoautotrophic, non-spore-forming, aerobic, thermophilic, sulfur-oxidizing bacterium of the genus Thermothrix, isolated from a hot spring on Sao Miguel Island in the Azores. T. azorensis uses thiosulfate, tetrathionate, hydrogen sulfide, and elemental sulfur for its sources of energy (chemolithoautotrophic).
Sulfobacillus acidophilus is a species of moderately thermophilic mineral-sulphide-oxidizing bacteria. It is Gram-positive, acidophilic and ferrous-iron-oxidising as well.
Bacillus fumarioli is a species of aerobic endospore-forming bacteria. It is moderately thermophilic and acidophilic, with type strain LMG 17489T.
Hydrogenibacillus is a thermophilic and facultatively chemolithoautotrophic genus of bacteria from the family of Bacillaceae with one known species. Bacillus schlegelii was transferred to Hydrogenibacillus schlegelii
Hydrogenibacillus schlegelii is a Gram-positive species of bacteria. Strains of this species were originally isolated from a lake near St-Blaise, Neuchâtel, Switzerland. The species is thermophilic; strains isolated from soil in Antarctica were found to grow at temperatures between 59 and 72 °C.
Nikos Kyrpides is a Greek-American bioscientist who has worked on the origins of life, information processing, bioinformatics, microbiology, metagenomics and microbiome data science. He is a senior staff scientist at the Berkeley National Laboratory, head of the Prokaryote Super Program and leads the Microbiome Data Science program at the US Department of Energy Joint Genome Institute.
Sulfobacillus thermosulfidooxidans is a species of bacteria of the genus Sulfobacillus. It is an acidophilic, mixotrophic, moderately thermophilic, Gram-positive, sporulating facultative anaerobe. As its name suggests, it is capable of oxidizing sulfur.
Kyrpidia tusciae is a species of Gram positive, facultatively anaerobic, thermophilic bacterium. The cells are rod-shaped and form spores.
Kyrpidia spormannii is a species of Gram positive, aerobic, thermophilic bacterium. The cells are rod-shaped and form spores. It was first isolated from sediment samples from hydrothermal systems collected in the Azores. The species is named in honor of German-American microbiologist Alfred M. Spormann, in recognition of his work on the field microbial electrosynthesis.
Effusibacillus is a genus of Gram-positive, rod-shaped, aerobic, spore-forming bacteria.
Neobacillus is a genus of rod-shaped bacteria that show Gram-positive or Gram-variable staining. This genus belongs under the family Bacillaceae within the order Bacillales. The type species of Neobacillus is Neobacillus niacini.
Cytobacillus is a genus of rod-shaped bacteria that stain either Gram-positive or Gram-variable in the family Bacillaceae within the order Bacillales. The type species for this genus is Cytobacillus firmus.
Pyrinomonas is a genus of bacteria, containing the only species Pyrinomonas methylaliphatogenes, which is an aerobic, thermophilic, and acidophilic strain of bacteria that can scavenge hydrogen gas from the atmosphere to survive in nutrient-deficient areas.