Edaphobacter

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Edaphobacter
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Phylum: Acidobacteriota
Class: "Acidobacteriia"
Order: Acidobacteriales
Family: Acidobacteriaceae
Genus: Edaphobacter
Koch et al. 2008
Type species
Edaphobacter modestus
Koch et al. 2008
Species

Edaphobacter is a genus of Gram-negative, rod shaped bacteria. [1] It contains seven species: [2]

Contents

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI) [3]

16S rRNA based LTP_10_2024 [4] [5] [6] 120 marker proteins based GTDB 09-RS220 [7] [8] [9]
Edaphobacter

E. acidisoliXia et al. 2017

E. bradusXia et al. 2018

E. modestus Koch et al. 2008

E. aggregans Koch et al. 2008

E. flagellatusXia et al. 2018

Edaphobacter dinghuensisWang et al. 2016

Tunturiibacter lichenicolacorrig. (Belova et al. 2018) Messyasz et al. 2024

Granulicella species-group 2

Granulicella species-group 2

Granulicella aggregansPankratov & Dedysh 2010

Granulicella arcticaMannisto et al. 2012

Edaphobacter

E. lichenicolaBelova et al. 2018

E. dinghuensisWang et al. 2016

E. acidisoliXia et al. 2017

E. bradusXia et al. 2018

E. modestus Koch et al. 2008

E. aggregans Koch et al. 2008

E. flagellatusXia et al. 2018

See also

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References

  1. Koch, I. H.; Gich, F.; Dunfield, P. F.; Overmann, J. (1 May 2008). "Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils". International Journal of Systematic and Evolutionary Microbiology. 58 (5): 1114–1122. doi: 10.1099/ijs.0.65303-0 . PMID   18450699.
  2. 1 2 Parte; et al. "Edaphobacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
  3. Sayers; et al. "Edaphobacter". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
  4. "The LTP" . Retrieved 10 December 2024.
  5. "LTP_all tree in newick format" . Retrieved 10 December 2024.
  6. "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
  7. "GTDB release 09-RS220". Genome Taxonomy Database . Retrieved 10 May 2024.
  8. "bac120_r220.sp_labels". Genome Taxonomy Database . Retrieved 10 May 2024.
  9. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2024.