Edaphobacter

Edaphobacter
Scientific classification
Domain:	Bacteria
Kingdom:	Pseudomonadati
Phylum:	Acidobacteriota
Class:	"Acidobacteriia"
Order:	Acidobacteriales
Family:	Acidobacteriaceae
Genus:	Edaphobacter Koch et al. 2008
Type species
Edaphobacter modestus Koch et al. 2008
Species
E. acidisoli E. aggregans E. bradus E. dinghuensis E. flagellatus E. lichenicola E. modestus E. paludis

Edaphobacter is a genus of Gram-negative, rod shaped bacteria. ^[1] It contains seven species: ^[2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) ^[2] and National Center for Biotechnology Information (NCBI). ^[3]

16S rRNA based LTP_10_2024 [4] [5] [6]

120 marker proteins based GTDB 10-RS226 [7] [8] [9]

Bryocella elongata Granulicella G. mallensis G. acidiphila G. cerasi G. paludicola Edaphobacter E. acidisoli E. bradus E. aggregans E. flagellatus E. modestus Edaphobacter dinghuensis Edaphobacter lichenicola Granulicella~ Granulicella sibirica Granulicella aggregans Granulicella rosea Granulicella tundricola Granulicella pectinivorans Granulicella arctica Granulicella sapmiensis

Granulicella G. cerasiYamada et al. 2014 Bryocella elongata Dedysh et al. 2012 G. paludicolaPankratov & Dedysh 2010 G. mallensisMannisto et al. 2012 G. sapmiensisMannisto et al. 2012 Edaphobacter Granulicella pectinivoransPankratov & Dedysh 2010 Granulicella sibiricaOshkin et al. 2019 Granulicella roseaPankratov & Dedysh 2010 Granulicella tundricolaMannisto et al. 2012 Granulicella aggregansPankratov & Dedysh 2010 Granulicella arcticaMannisto et al. 2012 E. lichenicolaBelova et al. 2018 Tunturiibacter psychrotoleranscorrig. Messyasz et al. 2024 Tunturiibacter empetritectuscorrig. Messyasz et al. 2024 Tunturiibacter gelidoferenscorrig. Messyasz et al. 2024 E. acidisoliXia et al. 2017b E. dinghuensisWang et al. 2016 E. paludisHuber et al. 2024 E. bradusXia et al. 2018b E. modestus Koch et al. 2008 E. aggregans Koch et al. 2008 E. flagellatusXia et al. 2018b

See also

• List of bacterial orders
• List of bacteria genera

References

1. Koch, I. H.; Gich, F.; Dunfield, P. F.; Overmann, J. (1 May 2008). "Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils". International Journal of Systematic and Evolutionary Microbiology. 58 (5): 1114–1122. doi: 10.1099/ijs.0.65303-0 . PMID   18450699.
2. Edaphobacter in LPSN ; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 53: D1 –D12. doi:10.1093/nar/gkaf1110.
3. Schoch CL; et al. "Edaphobacter". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-06-05.
4. "The LTP" . Retrieved 10 December 2024.
5. "LTP_all tree in newick format" . Retrieved 10 December 2024.
6. "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
7. "GTDB release 10-RS226". Genome Taxonomy Database . Retrieved 1 May 2025.
8. "bac120_r226.sp_label". Genome Taxonomy Database . Retrieved 1 May 2025.
9. "Taxon History". Genome Taxonomy Database . Retrieved 1 May 2025.