Mir-396 microRNA precursor family

mir-396
Identifiers
Symbol	mir-396
Rfam	RF00648
miRBase family	MIPF0000047
Other data
RNA type	microRNA
Domain	Eukaryota;
PDB structures	PDBe

In molecular biology mir-396 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

See also

• MicroRNA

Further reading

• Zhou J, Liu M, Jiang J, Qiao G, Lin S, Li H, Xie L, Zhuo R (September 2012). "Expression profile of miRNAs in Populus cathayana L. and Salix matsudana Koidz under salt stress". Molecular Biology Reports. 39 (9): 8645–54. doi:10.1007/s11033-012-1719-4. PMID   22718503. S2CID   7113005.
• Hewezi T, Maier TR, Nettleton D, Baum TJ (May 2012). "The Arabidopsis microRNA396-GRF1/GRF3 regulatory module acts as a developmental regulator in the reprogramming of root cells during cyst nematode infection". Plant Physiology. 159 (1): 321–35. doi:10.1104/pp.112.193649. PMC   3375968 . PMID   22419826.
• Debernardi JM, Rodriguez RE, Mecchia MA, Palatnik JF (January 2012). Axtell MJ (ed.). "Functional specialization of the plant miR396 regulatory network through distinct microRNA-target interactions". PLOS Genetics. 8 (1) e1002419. doi: 10.1371/journal.pgen.1002419 . PMC   3252272 . PMID   22242012.
• Monavar Feshani A, Mohammadi S, Frazier TP, Abbasi A, Abedini R, Karimi Farsad L, Ehya F, Salekdeh GH, Mardi M (February 2012). "Identification and validation of Asteraceae miRNAs by the expressed sequence tag analysis". Gene. 493 (2): 253–9. doi:10.1016/j.gene.2011.11.024. PMID   22146318.
• Wong MM, Cannon CH, Wickneswari R (July 2011). "Identification of lignin genes and regulatory sequences involved in secondary cell wall formation in Acacia auriculiformis and Acacia mangium via de novo transcriptome sequencing". BMC Genomics. 12: 342. doi: 10.1186/1471-2164-12-342 . PMC   3161972 . PMID   21729267.
• Kantar M, Lucas SJ, Budak H (March 2011). "miRNA expression patterns of Triticum dicoccoides in response to shock drought stress". Planta. 233 (3): 471–84. doi:10.1007/s00425-010-1309-4. PMID   21069383. S2CID   27289636.
• Wang L, Gu X, Xu D, Wang W, Wang H, Zeng M, Chang Z, Huang H, Cui X (January 2011). "miR396-targeted AtGRF transcription factors are required for coordination of cell division and differentiation during leaf development in Arabidopsis". Journal of Experimental Botany. 62 (2): 761–73. doi:10.1093/jxb/erq307. PMC   3003814 . PMID   21036927.
• Chen M, Meng Y, Gu H, Chen D (December 2010). "Functional characterization of plant small RNAs based on next-generation sequencing data". Computational Biology and Chemistry. 34 (5–6): 308–12. doi:10.1016/j.compbiolchem.2010.10.001. PMID   21030312.
• Xie F, Frazier TP, Zhang B (February 2011). "Identification, characterization and expression analysis of MicroRNAs and their targets in the potato (Solanum tuberosum)". Gene. 473 (1): 8–22. doi:10.1016/j.gene.2010.09.007. PMID   20933063.
• Zhou L, Liu Y, Liu Z, Kong D, Duan M, Luo L (October 2010). "Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa". Journal of Experimental Botany. 61 (15): 4157–68. doi: 10.1093/jxb/erq237 . PMID   20729483.
• Gao P, Bai X, Yang L, Lv D, Li Y, Cai H, Ji W, Guo D, Zhu Y (April 2010). "Over-expression of osa-MIR396c decreases salt and alkali stress tolerance". Planta. 231 (5): 991–1001. doi:10.1007/s00425-010-1104-2. PMID   20135324. S2CID   30606781.
• Rodriguez RE, Mecchia MA, Debernardi JM, Schommer C, Weigel D, Palatnik JF (January 2010). "Control of cell proliferation in Arabidopsis thaliana by microRNA miR396". Development. 137 (1): 103–12. doi:10.1242/dev.043067. PMC   2796936 . PMID   20023165.
• Liu D, Song Y, Chen Z, Yu D (June 2009). "Ectopic expression of miR396 suppresses GRF target gene expression and alters leaf growth in Arabidopsis". Physiologia Plantarum. 136 (2): 223–36. doi:10.1111/j.1399-3054.2009.01229.x. PMID   19453503.
• Qiu D, Pan X, Wilson IW, Li F, Liu M, Teng W, Zhang B (May 2009). "High throughput sequencing technology reveals that the taxoid elicitor methyl jasmonate regulates microRNA expression in Chinese yew (Taxus chinensis)". Gene. 436 (1–2): 37–44. doi:10.1016/j.gene.2009.01.006. PMID   19393185.
• Hewezi T, Howe P, Maier TR, Baum TJ (December 2008). "Arabidopsis small RNAs and their targets during cyst nematode parasitism". Molecular Plant-Microbe Interactions. 21 (12): 1622–34. doi: 10.1094/MPMI-21-12-1622 . PMID   18986258.
• Sunkar R, Jagadeeswaran G (April 2008). "In silico identification of conserved microRNAs in large number of diverse plant species". BMC Plant Biology. 8: 37. doi: 10.1186/1471-2229-8-37 . PMC   2358906 . PMID   18416839.
• Liu HH, Tian X, Li YJ, Wu CA, Zheng CC (May 2008). "Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana". RNA. 14 (5): 836–43. doi:10.1261/rna.895308. PMC   2327369 . PMID   18356539.

External links

• Page for MIR396 microRNA precursor family at Rfam