Haplogroup R (mtDNA) Last updated October 02, 2025  Human mitochondrial DNA haplogroup
Haplogroup R     Possible time of origin  66.8± 14.2  kya [ 1]    Possible place of origin  Southeast Asia   [ 2]     Ancestor  N   Descendants  R0 , R1, R1b , R2'JT , R3, R5, R6'7, R8, R9, R11'B , R12'21, R14, R22, R23, R30, R31, P , U   Defining mutations 12705, 16223 [ 3]     
Haplogroup R  is a widely distributed human mitochondrial DNA  (mtDNA) haplogroup. Haplogroup R  is associated with the peopling of Eurasia  after about 70,000 years ago, and is distributed in modern populations throughout the world outside of sub-Saharan Africa . [ 4]    
Haplogroup R is a descendant of the macro-haplogroup N . Among the R clade's descendant haplogroups are B , U  (and thus K ), F , R0  (and thus HV , H , and V ), and JT  (the ancestral haplogroup of J  and T ).
Origin Soares et al. (2009) estimate the age of haplogroup R at roughly 50,000 to 70,000 years ago. [ 1]    
This is consistent with an emergence in the course of the Southern Dispersal  out of East Africa  to West, South and Southeast Asia. [ 5]      It has been suggested that the early lineage of haplogroups M, N and R along the coastal route during the period of roughly 70,000 to 60,000 years ago. [ 6]     The northern route out of Africa is another possibility, where the expansion of haplogroup R may originate from Southeast Asia . [ 7]    
Haplogroup R has wide diversity and antiquity in the indigenous population of South Asia . Tribes and castes of Western and Southern India show higher diversity than the other regions, possibly suggesting their autochthonous status. [ 8]     Larruga et al. (2017) found mtDNA R spread to Eurasia  and Australia  from a core area along the Southeast Asian  coast. [ 4]    
Distribution Haplogroup R and its descendants are distributed all over Australasia , Americas , Southeast Asia , South Asia , Central Asia , West Asia , East Asia , Europe , North Africa  and Horn of Africa .
The basal R* clade is found among the Soqotri  (1.2%), as well as in Northeast Africa  (1.5%), the Middle East  (0.8%), the Near East (0.8%), and the Arabian Peninsula  (0.3%). [ 13]    
Subclades Haplogroup R  R0    or pre-HV R1  pre-JT  or R2'JT  R3 : Found in Armenia. [ 22]     Also observed in an ancient individual from Hungary , dating to 7000 years ago [ 23]    R5 : Widely spread in the Indian subcontinent . Specially in Madhya Pradesh  (India ) at 17%. [ 24]    R6'7  (16362) The most important presence is among Austroasiatic language -speakers from India  (10%). [ 25]    R8 : The highest frequency occurs towards East India , especially within Orissa  (12%), and it is found among the Austroasiatic  tribes  (Munda  and Khasi  speakers). It is also present in low frequency among speakers of Dravidian, Indo-European, and Tibeto-Burman (e.g.  Nyishi , Changpa , Sherpa ). [ 28]    R9  (16304) R11'B (16189)  R12'21  R14 : Found in Papua New Guinea   [ 41]     and in Austronesian  speakers of East Timor  and Lembata . [ 42]    R22  or R12: Very frequent in the Shompen  (10/29 = 34.5%). [ 43]     Elsewhere found mainly in south-central Indonesia  (11.4% Mataram , 8.0% Waingapu , 7.3% Bali , 1.9% Borneo ) and in Cham  of Bình Thuận , Vietnam (7/168 = 4.2%), [ 44]     with singleton or sporadic occurrences in Thailand , Sumatra , Java , Sulawesi , and Alor . [ 33]    R23 : Small clade found in Bali  and Sumba  (Indonesia). [ 33]    R30 R31 R32  P:    It is characteristic of Sahul . Found in Philippines  and East Indonesia .  U   Tree This phylogenetic tree of haplogroup R subclades is based on the paper by Mannis van Oven and Manfred Kayser Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation  [ 3]     and subsequent published research.
R  R0    (formerly pre-HV) R0a'b R0a R0a1 R0a1a R0a1a1  R0a1a2 R0a1a3 R0a1a4  R0a1-T152C!   R0a-60.1T R0a2'3 R0a2 R0a2a  R0a2b R0a2c R0a2d R0a2e R0a2f  R0a2g R0a2h R0a2i R0a2-T195C!  R0a2k  R0a2l R0a2m R0a2n  R0a3   R0a4   R0b   HV   HV0 (formerly pre-V)  HV1  HV-A73G!  HV4 HV4a HV4a1 HV4a1-C16291T HV4a1a HV4a1a1 HV4a1a2 HV4a1a3 HV4a1a4    HV4a2   HV4b HV4c  HV5  HV-T16311C! HV6  HV7 HV8 HV9  HV10 HV11  HV14  HV15 HV16 HV17  HV22 HV23 HV24  HV12  HV13  HV18 HV19 HV21  H   R1  R2'JT  R2 R2-T13500C R2-T13500C-T195C!  R2b  R2c R2d    JT    R5 R6'7  R8  - India R8a - Sri Lanka R8a1 R8a1a R8a1a1 R8a1a1a  R8a1a1b R8a1a1c R8a1a1d  R8a1a2  R8a1a3 - South Africa, Norway  R8a1-T16093C   R8a2  R8b  (16304) R9 R9b - Cambodia, Thailand (Lao Isan  in Ubon Ratchathani Province  and Roi Et Province ), [ 55]     Guinea R9b1 - China, Uyghur, Thailand (Mon  in Central Thailand , Thai  in Western Thailand ), Laos (Lao  in Vientiane   [ 55]    ), Vietnam (La Hủ ), Denmark R9b1a R9b1a1 - Philippines (Mamanwa ) R9b1a1a - China, Thailand (Karen  and Thai Lue  in Northern Thailand , Lao Isan  in Roi Et Province , [ 55]     Thai  in Central Thailand  and Eastern Thailand ), Cambodia (Banteay Meanchey ), Malaysia (Semelai , aboriginal Malay ), Singapore, Indonesia (Tengger , Palembang , Padang , Manado ), Vietnam (Giarai )  R9b1a2 - Taiwan (Tsou ), Thailand (Lao Isan  in Loei Province , Thai  in Western Thailand )  R9b1a3 - Thailand, China (Han , Dai ), Vietnam (Dao , Nùng , etc. ), Kazakhstan  R9b1b - China, Vietnam, Cambodia (Siem Reap ), Thailand (Khon Mueang  from Chiang Mai Province , Tai Yuan  from Central Thailand , Mon  from Northern Thailand )  R9b2 - Thailand, Cambodia, Vietnam  R9c - China (Barghut from Hulun Buir ), Taiwan R9c1 R9c1a - Philippines, Indonesia, Taiwan (Makatao ), Thailand (Khon Mueang  from Chiang Rai Province )  R9c1b R9c1b1 - China (Han ), Vietnam (Kinh , Dao ), Thailand (Tai Dam  in Kanchanaburi Province , Khon Mueang  in Mae Hong Son Province , Tai Yuan  in Northern Thailand , Thai Lue  in Northern Thailand ), Myanmar R9c1b2 - Thailand (Khon Mueang  in Chiang Rai Province ), Taiwan (Makatao , etc. ), Philippines (Ifugao , Bugkalot ), East Timor     F     R-T16189C!  R12'21  R14 R22 R23 R30  R31  R32  P    U   References  1    2     Soares, Pedro; Ermini, Luca; Thomson, Noel; Mormina, Maru; Rito, Teresa; Röhl, Arne; Salas, Antonio; Oppenheimer, Stephen; MacAulay, Vincent (2009). "Correcting for Purifying Selection: An Improved Human Mitochondrial Molecular Clock" . The American Journal of Human Genetics . 84  (6): 740– 59. doi :10.1016/j.ajhg.2009.05.001 . PMC     2694979   . PMID     19500773 .  ↑     Larruga, Jose M (23 May 2017). "Carriers of mitochondrial DNA macrohaplogroup R colonized Eurasia and Australasia from a southeast Asia core area" . BMC Evolutionary Biology . 17  (1): 115. Bibcode :2017BMCEE..17..115L . doi : 10.1186/s12862-017-0964-5   . PMC     5442693   . PMID     28535779 .  1    2     Van Oven, Mannis; Kayser, Manfred (2009). "Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation" . Human Mutation . 30  (2): E386–94. doi : 10.1002/humu.20921   . PMID     18853457 . 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