ATP2B2

ATP2B2
Identifiers
Aliases	ATP2B2 , PMCA2, PMCA2a, PMCA2i, ATPase plasma membrane Ca2+ transporting 2, DFNA82
External IDs	OMIM: 108733 MGI: 105368 HomoloGene: 56150 GeneCards: ATP2B2
Gene location (Human) Chr. Chromosome 3 (human) [1] Band 3p25.3 Start 10,324,023 bp [1] End 10,708,007 bp [1]
Gene location (Mouse) Chr. Chromosome 6 (mouse) [2] Band 6 E3|6 52.85 cM Start 113,720,792 bp [2] End 114,019,574 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in endothelial cell Brodmann area 46 pons middle temporal gyrus external globus pallidus Brodmann area 23 parietal lobe occipital lobe postcentral gyrus superior frontal gyrus Top expressed in olfactory tubercle cerebellar vermis prefrontal cortex lateral geniculate nucleus superior frontal gyrus medial geniculate nucleus medial dorsal nucleus globus pallidus pontine nuclei primary motor cortex More reference expression data BioGPS More reference expression data
Gene ontology Molecular function nucleotide binding calcium ion binding metal ion binding calmodulin binding protein C-terminus binding protein binding ATP binding hydrolase activity P-type calcium transporter activity PDZ domain binding P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration P-type calcium transporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration Cellular component cytoplasm integral component of membrane intracellular membrane-bounded organelle membrane plasma membrane synapse integral component of plasma membrane cell junction extracellular exosome presynapse postsynaptic density membrane glutamatergic synapse GABA-ergic synapse Biological process regulation of cardiac conduction ion transport ion transmembrane transport neuron differentiation calcium ion transport calcium ion transmembrane transport sensory perception of sound regulation of cytosolic calcium ion concentration transport cellular calcium ion homeostasis regulation of presynaptic cytosolic calcium ion concentration regulation of postsynaptic cytosolic calcium ion concentration Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 491 11941 Ensembl ENSG00000157087 ENSMUSG00000030302 UniProt Q01814 Q9R0K7 RefSeq (mRNA) NM_001001331 NM_001683 NM_001330611 NM_001353564 NM_001363862 NM_001036684 NM_009723 NM_001347365 RefSeq (protein) NP_001001331 NP_001317540 NP_001674 NP_001340493 NP_001350791 NP_001031761 NP_001334294 NP_033853 Location (UCSC) Chr 3: 10.32 – 10.71 Mb Chr 6: 113.72 – 114.02 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Plasma membrane calcium-transporting ATPase 2 is an enzyme that in humans is encoded by the ATP2B2 gene. ^{[5] [6]}

The protein encoded by this gene belongs to the family of P-type primary ion transport ATPases characterized by the formation of an aspartyl phosphate intermediate during the reaction cycle. These enzymes remove bivalent calcium ions from eukaryotic cells against very large concentration gradients and play a critical role in intracellular calcium homeostasis. The mammalian plasma membrane calcium ATPase isoforms are encoded by at least four separate genes and the diversity of these enzymes is further increased by alternative splicing of transcripts. The expression of different isoforms and splice variants is regulated in a developmental, tissue- and cell type-specific manner, suggesting that these pumps are functionally adapted to the physiological needs of particular cells and tissues. This gene encodes the plasma membrane calcium ATPase isoform 2. Alternatively spliced transcript variants encoding different isoforms have been identified. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000157087 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000030302 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Heim R, Hug M, Iwata T, Strehler EE, Carafoli E (May 1992). "Microdiversity of human-plasma-membrane calcium-pump isoform 2 generated by alternative RNA splicing in the N-terminal coding region". Eur J Biochem. 205 (1): 333–40. doi: 10.1111/j.1432-1033.1992.tb16784.x . PMID   1313367.
6. "Entrez Gene: ATP2B2 ATPase, Ca++ transporting, plasma membrane 2".

External links

• Human ATP2B2 genome location and ATP2B2 gene details page in the UCSC Genome Browser .

Further reading

• Møller JV, Juul B, le Maire M (1996). "Structural organization, ion transport, and energy transduction of P-type ATPases". Biochim. Biophys. Acta. 1286 (1): 1–51. doi:10.1016/0304-4157(95)00017-8. PMID   8634322.
• Strehler EE, Zacharias DA (2001). "Role of alternative splicing in generating isoform diversity among plasma membrane calcium pumps". Physiol. Rev. 81 (1): 21–50. doi:10.1152/physrev.2001.81.1.21. PMID   11152753. S2CID   9062253.
• Strehler EE, Treiman M (2004). "Calcium pumps of plasma membrane and cell interior". Curr. Mol. Med. 4 (3): 323–35. doi:10.2174/1566524043360735. PMID   15101689.
• Brandt P, Ibrahim E, Bruns GA, Neve RL (1992). "Determination of the nucleotide sequence and chromosomal localization of the ATP2B2 gene encoding human Ca(2+)-pumping ATPase isoform PMCA2". Genomics. 14 (2): 484–7. doi:10.1016/S0888-7543(05)80246-0. PMID   1427863.
• Wang KK, Wright LC, Machan CL, et al. (1991). "Protein kinase C phosphorylates the carboxyl terminus of the plasma membrane Ca(2+)-ATPase from human erythrocytes". J. Biol. Chem. 266 (14): 9078–85. doi: 10.1016/S0021-9258(18)31554-0 . PMID   1827443.
• Stauffer TP, Hilfiker H, Carafoli E, Strehler EE (1995). "Quantitative analysis of alternative splicing options of human plasma membrane calcium pump genes". J. Biol. Chem. 269 (50): 32022. doi: 10.1016/S0021-9258(18)31797-6 . PMID   7989379.
• Kuzmin I, Stackhouse T, Latif F, et al. (1994). "One-megabase yeast artificial chromosome and 400-kilobase cosmid-phage contigs containing the von Hippel-Lindau tumor suppressor and Ca(2+)-transporting adenosine triphosphatase isoform 2 genes". Cancer Res. 54 (9): 2486–91. PMID   8162598.
• Wang MG, Yi H, Hilfiker H, et al. (1994). "Localization of two genes encoding plasma membrane Ca2+ ATPases isoforms 2 (ATP2B2) and 3 (ATP2B3) to human chromosomes 3p26→p25 and Xq28, respectively". Cytogenet. Cell Genet. 67 (1): 41–5. doi:10.1159/000133794. PMID   8187550.
• Stauffer TP, Hilfiker H, Carafoli E, Strehler EE (1994). "Quantitative analysis of alternative splicing options of human plasma membrane calcium pump genes". J. Biol. Chem. 268 (34): 25993–6003. doi: 10.1016/S0021-9258(19)74484-6 . PMID   8245032.
• Latif F, Duh FM, Gnarra J, et al. (1993). "von Hippel-Lindau syndrome: cloning and identification of the plasma membrane Ca(++)-transporting ATPase isoform 2 gene that resides in the von Hippel-Lindau gene region". Cancer Res. 53 (4): 861–7. PMID   8428366.
• Kozel PJ, Friedman RA, Erway LC, et al. (1998). "Balance and hearing deficits in mice with a null mutation in the gene encoding plasma membrane Ca2+-ATPase isoform 2". J. Biol. Chem. 273 (30): 18693–6. doi: 10.1074/jbc.273.30.18693 . PMID   9668038.
• Street VA, McKee-Johnson JW, Fonseca RC, et al. (1998). "Mutations in a plasma membrane Ca2+-ATPase gene cause deafness in deafwaddler mice". Nat. Genet. 19 (4): 390–4. doi:10.1038/1284. PMID   9697703. S2CID   43382998.
• Usachev YM, Toutenhoofd SL, Goellner GM, et al. (2001). "Differentiation induces up-regulation of plasma membrane Ca(2+)-ATPase and concomitant increase in Ca(2+) efflux in human neuroblastoma cell line IMR-32". J. Neurochem. 76 (6): 1756–65. doi: 10.1046/j.1471-4159.2001.00169.x . PMID   11259493. S2CID   5721693.
• DeMarco SJ, Strehler EE (2001). "Plasma membrane Ca2+-atpase isoforms 2b and 4b interact promiscuously and selectively with members of the membrane-associated guanylate kinase family of PDZ (PSD95/Dlg/ZO-1) domain-containing proteins". J. Biol. Chem. 276 (24): 21594–600. doi: 10.1074/jbc.M101448200 . PMID   11274188.
• DeMarco SJ, Chicka MC, Strehler EE (2002). "Plasma membrane Ca2+ ATPase isoform 2b interacts preferentially with Na+/H+ exchanger regulatory factor 2 in apical plasma membranes". J. Biol. Chem. 277 (12): 10506–11. doi: 10.1074/jbc.M111616200 . PMID   11786550.
• Wistow G, Bernstein SL, Wyatt MK, et al. (2002). "Expressed sequence tag analysis of human RPE/choroid for the NEIBank Project: over 6000 non-redundant transcripts, novel genes and splice variants". Mol. Vis. 8: 205–20. PMID   12107410.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.