Desulfosporosinus

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Desulfosporosinus
Scientific classification
Domain:
Bacteria
Kingdom:
Bacillati
Phylum:
Bacillota
Class:
Clostridia
Order:
Desulfitobacteriales
Family:
Desulfitobacteriaceae
Genus:
Desulfosporosinus

Stackebrandt et al. 1997 [1] [2]
Type species
Desulfosporosinus orientis
(Adams & Postgate 1959) Stackebrandt et al. 1997
Species [3]

See text

Desulfosporosinus is a genus of strictly anaerobic, sulfate-reducing bacteria, often found in soil.

Contents

The type species D. orientis was isolated in 1959 [4] with the proposed name Desulfovibrio orientis, and was later assigned to the genus Desulfotomaculum. [5] Based on 16S rRNA gene sequence data Desulfotomaculum orientis was reclassified as Desulfosporosinus orientis in 1997. [1]

Species

SpeciesType strainIsolated fromNotesReferences
D. acididuransM1 (DSM 27692)Acidic sedimentmoderately acidophilic [6]
D. acidiphilusSJ4 (DSM 22704)Acid mine drainage sedimentmoderately acidophilic [7]
D. auripigmentiOREX-4 (DSM 13351)Freshwater sediment( [8] ) [9]
D. burensisBSREI1 (DSM 24089)Borehole [10]
D. fructosivorans63.6F (DSM140297)Marine subsurface sediment [11]
D. hippei343 (DSM 8344)Permafrost soil [2]
D. lacusSTP12 (DSM 15449)Freshwater sediment [12]
D. meridieiS10 (DSM 13257)Gasolene-contaminated groundwater [13]
D. nitroreducens59.4B (DSM 140295)Marine subsurface sediment [14]
D. orientisSingapore I (DSM 765)Soil( [4] [5] ) [1]
D. youngiaeJW/YJL-B18 (DSM 17734)Constructed wetland / acid mine drainage sediment [15]

Genomes

Five complete Desulfosporosinus genomes are available, and another two genomes are in the progress of being sequenced.

StrainStatusYearAccession numberReferences
D. acididurans M1Published draft2015 LDZY00000000 [16]
D. acidiphilus SJ4Complete and published2012 CP003639 [17]
D. meridiei S10Complete and published2012 CP003629 [17]
D. orientis Singapore IComplete and published2011 CP003108 [17]
D. sp. OTComplete and published2011 AGAF00000000 [18]
D. youngiae JW/YJL-B18Complete and published2011 CM001441 [17]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [19] and National Center for Biotechnology Information (NCBI). [3]

16S rRNA based LTP_10_2024 [20] [21] [22] 120 marker proteins based GTDB 09-RS220 [23] [24] [25]
Desulfosporosinus

D. orientis (Adams & Postgate 1959) Stackebrandt et al. 1997

D. acididuransSanchez-Andrea et al. 2015

D. acidiphilusAlazard et al. 2012

D. auripigmenticorrig. (Newman et al. 2000) Stackebrandt et al. 2003

D. youngiaeLee, Romanek & Wiegel 2009

D. hippeiVatsurina et al. 2008

D. meridieiRobertson et al. 2001

D. metalliduransPanova et al. 2021

D. nitroreducensVandieken et al. 2017

D. fructosivoransVandieken et al. 2017

D. burensisMayeux et al. 2013

D. lacusRamamoorthy et al. 2006

Desulfosporosinus

D. acididurans

D. acidiphilus

D. metallidurans

D. fructosivorans

"Ca. D. infrequens" Hausmann et al. 2019

D. orientis

D. youngiae

D. lacus

D. nitroreducens

D. hippei

D. meridiei

Unassigned species:

See also

References

  1. 1 2 3 Stackebrandt, E; C Sproer; F A Rainey; J Burghardt; O Päuker; H Hippe (1997). "Phylogenetic analysis of the genus Desulfotomaculum: evidence for the misclassification of Desulfotomaculum guttoideum and description of Desulfotomaculum orientis as Desulfosporosinus orientis gen. nov., comb. nov". International Journal of Systematic Bacteriology. 47 (4): 1134–1139. doi: 10.1099/00207713-47-4-1134 . PMID   9336920.
  2. 1 2 Vatsurina, A; D Badrutdinova; P Schumann; S Spring; M Vainshtein (2008). "Desulfosporosinus hippei sp. nov., a mesophilic sulfate-reducing bacterium isolated from permafrost". International Journal of Systematic and Evolutionary Microbiology. 58 (5): 1228–1232. doi: 10.1099/ijs.0.65368-0 . PMID   18450718.
  3. 1 2 C.L. Schoch; et al. "Desulfosporosinus". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.
  4. 1 2 Adams, Mary E; J R Postgate (1959). "A new sulphate-reducing vibrio". Journal of General Microbiology. 20 (2): 252–257. doi: 10.1099/00221287-20-2-252 . PMID   13654719.
  5. 1 2 Campbell, L L; J R Postgate (1965). "Classification of the spore-forming sulfate-reducing bacteria". Bacteriological Reviews. 29 (3): 359–363. doi: 10.1128/br.29.3.359-363.1965 . PMC   441283 . PMID   5826606. S2CID   237235010.
  6. ↑ Sánchez-Andrea, Irene; Alfons J. M. Stams; Sabrina Hedrich; Ivan Ňancucheo; D. Barrie Johnson (2014). "Desulfosporosinus acididurans sp. nov.: an acidophilic sulfate-reducing bacterium isolated from acidic sediments". Extremophiles: Life Under Extreme Conditions. 19 (1): 39–47. doi:10.1007/s00792-014-0701-6. PMID   25370366. S2CID   5158675.
  7. ↑ Alazard, Didier; Manon Joseph; Fabienne Battaglia-Brunet; Jean-Luc Cayol; Bernard Ollivier (2010). "Desulfosporosinus acidiphilus sp. nov.: a moderately acidophilic sulfate-reducing bacterium isolated from acid mining drainage sediments". Extremophiles: Life Under Extreme Conditions. 14 (3): 305–312. doi:10.1007/s00792-010-0309-4. PMID   20358236. S2CID   25655510.
  8. ↑ Newman, Dianne K.; Erin K. Kennedy; John D. Coates; Dianne Ahmann; Debra J. Ellis; Derek R. Lovley; François M. M. Morel (1997). "Dissimilatory arsenate and sulfate reduction in Desulfotomaculum auripigmentum sp. nov". Archives of Microbiology. 168 (5): 380–388. doi:10.1007/s002030050512. PMID   9325426. S2CID   2354562.
  9. ↑ Stackebrandt, Erko; Peter Schumann; Esther Schüler; Hans Hippe (2003). "Reclassification of Desulfotomaculum auripigmentum as Desulfosporosinus auripigmenti corrig., comb. nov". International Journal of Systematic and Evolutionary Microbiology. 53 (5): 1439–1443. doi: 10.1099/ijs.0.02526-0 . PMID   13130030.
  10. ↑ Mayeux, Bruno; Marie-Laure Fardeau; Manon Bartoli-Joseph; Laurie Casalot; Agnès Vinsot; Marc Labat (2012). "Desulfosporosinus burensis sp. nov.: a spore-forming, mesophilic, sulfate-reducing bacterium isolated from a deep clay environment". International Journal of Systematic and Evolutionary Microbiology. 63 (Pt 2): 593–598. doi:10.1099/ijs.0.035238-0. PMID   22544786.
  11. ↑ Vandieken, Verona; Niemann, Helge; Engelen, Bert; Cypionka, HeribertYR 2017 (2017). "Marinisporobacter balticus gen. nov., sp. nov., Desulfosporosinus nitroreducens sp. nov. and Desulfosporosinus fructosivorans sp. nov., new spore-forming bacteria isolated from subsurface sediments of the Baltic Sea". International Journal of Systematic and Evolutionary Microbiology. 67 (6): 1887–1893. doi: 10.1099/ijsem.0.001883 . ISSN   1466-5034. PMID   28646634.{{cite journal}}: CS1 maint: numeric names: authors list (link)
  12. ↑ Ramamoorthy, S; H Sass; H Langner; P Schumann; R M Kroppenstedt; S Spring; J Overmann; R F Rosenzweig (2006). "Desulfosporosinus lacus sp. nov., a sulfate-reducing bacterium isolated from pristine freshwater lake sediments". International Journal of Systematic and Evolutionary Microbiology. 56 (12): 2729–2736. doi: 10.1099/ijs.0.63610-0 . PMID   17158969.
  13. ↑ Robertson, W J; J P Bowman; P D Franzmann; B J Mee (2001). "Desulfosporosinus meridiei sp. nov., a spore-forming sulfate-reducing bacterium isolated from gasolene-contaminated groundwater". International Journal of Systematic and Evolutionary Microbiology. 51 (1): 133–140. doi: 10.1099/00207713-51-1-133 . PMID   11211250.
  14. ↑ Vandieken, Verona; Niemann, Helge; Engelen, Bert; Cypionka, HeribertYR 2017 (2017). "Marinisporobacter balticus gen. nov., sp. nov., Desulfosporosinus nitroreducens sp. nov. and Desulfosporosinus fructosivorans sp. nov., new spore-forming bacteria isolated from subsurface sediments of the Baltic Sea". International Journal of Systematic and Evolutionary Microbiology. 67 (6): 1887–1893. doi: 10.1099/ijsem.0.001883 . ISSN   1466-5034. PMID   28646634.{{cite journal}}: CS1 maint: numeric names: authors list (link)
  15. ↑ Lee, Yong-Jin; Christopher S Romanek; Juergen Wiegel (2009). "Desulfosporosinus youngiae sp. nov., a spore-forming, sulfate-reducing bacterium isolated from a constructed wetland treating acid mine drainage". International Journal of Systematic and Evolutionary Microbiology. 59 (11): 2743–2746. doi: 10.1099/ijs.0.007336-0 . PMID   19625426.
  16. ↑ Petzsch, Patrick; Poehlein, Anja; Johnson, D. Barrie; Daniel, Rolf; Schlömann, Michael; Mühling, Martin (2015). "Genome Sequence of the Moderately Acidophilic Sulfate-Reducing FirmicuteDesulfosporosinus acididurans(Strain M1T)". Genome Announcements. 3 (4): e00881-15. doi:10.1128/genomeA.00881-15. ISSN   2169-8287. PMC   4541271 . PMID   26251501.
  17. 1 2 3 4 Pester, Michael; Evelyne Brambilla; Didier Alazard; Thomas Rattei; Thomas Weinmaier; James Han; Susan Lucas; Alla Lapidus; Jan-Fang Cheng; Lynne Goodwin; Sam Pitluck; Lin Peters; Galina Ovchinnikova; Hazuki Teshima; John C Detter; Cliff S Han; Roxanne Tapia; Miriam L Land; Loren Hauser; Nikos C Kyrpides; Natalia N Ivanova; Ioanna Pagani; Marcel Huntmann; Chia-Lin Wei; Karen W Davenport; Hajnalka Daligault; Patrick S G Chain; Amy Chen; Konstantinos Mavromatis; Victor Markowitz; Ernest Szeto; Natalia Mikhailova; Amrita Pati; Michael Wagner; Tanja Woyke; Bernard Ollivier; Hans-Peter Klenk; Stefan Spring; Alexander Loy (2012). "Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T". Journal of Bacteriology. 194 (22): 6300–6301. doi:10.1128/JB.01392-12. PMC   3486391 . PMID   23105050.
  18. ↑ Abicht, Helge K.; Stefano Mancini; Olga V. Karnachuk; Marc Solioz (2011). "Genome Sequence of Desulfosporosinus sp. OT, an Acidophilic Sulfate-Reducing Bacterium from Copper Mining Waste in Norilsk, Northern Siberia". Journal of Bacteriology. 193 (21): 6104–6105. doi:10.1128/JB.06018-11. PMC   3194917 . PMID   21994931.
  19. ↑ A.C. Parte; et al. "Desulfosporosinus". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2025-02-28.
  20. ↑ "The LTP" . Retrieved 10 December 2024.
  21. ↑ "LTP_all tree in newick format" . Retrieved 10 December 2024.
  22. ↑ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
  23. ↑ "GTDB release 09-RS220". Genome Taxonomy Database . Retrieved 10 May 2024.
  24. ↑ "bac120_r220.sp_labels". Genome Taxonomy Database . Retrieved 10 May 2024.
  25. ↑ "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2024.
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