S8/S53 domain | |||||||||
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Identifiers | |||||||||
Symbol | Peptidase_S8 | ||||||||
Pfam | PF00082 | ||||||||
InterPro | IPR000209 | ||||||||
PROSITE | PDOC00125 | ||||||||
CATH | 1GA6 | ||||||||
SCOP2 | 1GA6 / SCOPe / SUPFAM | ||||||||
CDD | cd07477 | ||||||||
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The sedolisin (MEROPS S53) family of peptidases are a family of serine proteases structurally related to the subtilisin (S8) family. Well-known members of this family include sedolisin ("pseudomonalisin") found in Pseudomonas bacteria, xanthomonalisin ("sedolisin-B"), physarolisin as well as animal tripeptidyl peptidase I. It is also known as sedolysin or serine-carboxyl peptidase. This group of enzymes contains a variation on the catalytic triad: unlike S8 which uses Ser-His-Asp, this group runs on Ser-Glu-Asp, with an additional acidic residue Asp in the oxyanion hole. [1]
Their optimal pH is around 3. Most members of the family are produced as a precursor protein with N-terminal (InterPro : IPR015366 ) and sometimes C-terminal peptides that need to be cleaved off. [2]
Sedolisin | |||||||||
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Identifiers | |||||||||
EC no. | 3.4.21.100 | ||||||||
CAS no. | 848318-58-1 | ||||||||
Databases | |||||||||
IntEnz | IntEnz view | ||||||||
BRENDA | BRENDA entry | ||||||||
ExPASy | NiceZyme view | ||||||||
KEGG | KEGG entry | ||||||||
MetaCyc | metabolic pathway | ||||||||
PRIAM | profile | ||||||||
PDB structures | RCSB PDB PDBe PDBsum | ||||||||
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Sedolisin ( P42790 , pseudomonapepsin, sedolysin) is a serine protease. It is secreted by Pseudomonas sp. 101. It performs hydrolysis of the B chain of insulin at -Glu13-Ala-, -Leu15-Tyr- and -Phe25-Tyr-, and angiotensin I at -Tyr4-Ile-. A good synthetic substrate is Lys-Pro-Ile-Glu-Phe-Phe(NO2)-Arg-Leu. [3] [4] [5] [6]
Xanthomonalisin | |||||||||
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Identifiers | |||||||||
EC no. | 3.4.21.101 | ||||||||
CAS no. | 113356-29-9 | ||||||||
Databases | |||||||||
IntEnz | IntEnz view | ||||||||
BRENDA | BRENDA entry | ||||||||
ExPASy | NiceZyme view | ||||||||
KEGG | KEGG entry | ||||||||
MetaCyc | metabolic pathway | ||||||||
PRIAM | profile | ||||||||
PDB structures | RCSB PDB PDBe PDBsum | ||||||||
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Xanthomonalisin ( Q60106 ) is found in Xanthomonas bacteria. It cleaves caesin and clots milk. [7] [8]
Physarolisin | |||||||||
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Identifiers | |||||||||
EC no. | 3.4.21.103 | ||||||||
CAS no. | 94949-28-7 | ||||||||
Databases | |||||||||
IntEnz | IntEnz view | ||||||||
BRENDA | BRENDA entry | ||||||||
ExPASy | NiceZyme view | ||||||||
KEGG | KEGG entry | ||||||||
MetaCyc | metabolic pathway | ||||||||
PRIAM | profile | ||||||||
PDB structures | RCSB PDB PDBe PDBsum | ||||||||
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Physarolisin ( Q8MZS4 , physaropepsin) is a milk-clotting enzyme. It shows preferential cleavage of Gly8-Ser in B chain of insulin most rapidly, followed by Leu11!Val, Cys(SO3H)19-Gly and Phe24-Phe. [9] [10] [11] [12] [13]
It is special in that it is cold-adapted. It was discovered in the slime mold Physarum flavicomum . Similar proteins (InterPro : IPR017001 ) are also found in archaea. [14]
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Glutamic proteases are a group of proteolytic enzymes containing a glutamic acid residue within the active site. This type of protease was first described in 2004 and became the sixth catalytic type of protease. Members of this group of protease had been previously assumed to be an aspartate protease, but structural determination showed it to belong to a novel protease family. The first structure of this group of protease was scytalidoglutamic peptidase, the active site of which contains a catalytic dyad, glutamic acid (E) and glutamine (Q), which give rise to the name eqolisin. This group of proteases are found primarily in pathogenic fungi affecting plant and human.