The dinoflagellates are a monophyletic group of single-celled eukaryotes constituting the phylum Dinoflagellata and are usually considered protists. Dinoflagellates are mostly marine plankton, but they also are common in freshwater habitats. Their populations vary with sea surface temperature, salinity, and depth. Many dinoflagellates are photosynthetic, but a large fraction of these are in fact mixotrophic, combining photosynthesis with ingestion of prey.
The alveolates are a group of protists, considered a major clade and superphylum within Eukarya. They are currently grouped with the stramenopiles and Rhizaria among the protists with tubulocristate mitochondria into the SAR supergroup.
The Noctilucales are an order of marine dinoflagellates. They differ from most others in that the mature cell is diploid and its nucleus does not show a dinokaryotic organization. They show gametic meiosis.
Phaeodarea or Phaeodaria is a group of amoeboid cercozoan organisms. They are traditionally considered radiolarians, but in molecular trees do not appear to be close relatives of the other groups, and are instead placed among the Cercozoa. They are distinguished by the structure of their central capsule and by the presence of a phaeodium, an aggregate of waste particles within the cell.
Perkinsus marinus is a species of alveolate belonging to the phylum Perkinsozoa. It is similar to a dinoflagellate. It is known as a prevalent pathogen of oysters, causing massive mortality in oyster populations. The disease it causes is known as dermo or perkinsosis, and is characterized by the degradation of oyster tissues. The genome of this species has been sequenced.
Chromera velia, also known as a "chromerid", is a unicellular photosynthetic organism in the superphylum Alveolata. It is of interest in the study of apicomplexan parasites, specifically their evolution and accordingly, their unique vulnerabilities to drugs.
Myzozoa is a grouping of specific phyla within Alveolata, that either feed through myzocytosis, or were ancestrally capable of feeding through myzocytosis.
The Gymnodiniales are an order of dinoflagellates, of the class Dinophyceae. Members of the order are known as gymnodinioid or gymnodinoid. They are athecate, or lacking an armored exterior, and as a result are relatively difficult to study because specimens are easily damaged. Many species are part of the marine plankton and are of interest primarily due to being found in algal blooms. As a group the gymnodinioids have been described as "likely one of the least known groups of the open ocean phytoplankton."
Dinophyceae is a class of dinoflagellates.
Syndinium is a cosmopolitan genus of parasitic dinoflagellates that infest and kill marine planktonic species of copepods and radiolarians. Syndinium belongs to order Syndiniales, a candidate for the uncultured group I and II marine alveolates. The lifecycle of Syndinium is not well understood beyond the parasitic and zoospore stages.
Duboscquella is a genus of dinoflagellates.
Chromerida is a phylum of unicellular alveolates, which includes photosynthetic species Chromera velia and Vitrella brassicaformis. General features of the phylum include spherical cells each with a thick cell wall, chloroplast present with chlorophyll a only, and an internal developing flagellum at some lifestages.
Vitrella brassicaformis (CCMP3155) is a unicellular alga belonging to the eukaryotic supergroup Alveolata. V. brassicaformis and its closest known relative, Chromera velia, are the only two currently described members of the phylum Chromerida, which in turn constitutes part of the taxonomically unranked group Colpodellida. Chromerida is phylogenetically closely related to the phylum Apicomplexa, which includes Plasmodium, the agent of malaria. Notably, both V. brassicaformis and C. velia are photosynthetic, each containing a complex secondary plastid. This characteristic defined the discovery of these so-called 'chromerids,' as their photosynthetic capacity positioned them to shed light upon the evolution of Apicomplexa's non-photosynthetic parasitism. Both genera lack chlorophyll b or c; these absences link the two taxonomically, as algae bearing only chlorophyll a are rare amid the biodiversity of life. Despite their similarities, V. brassicaformis differs significantly from C. velia in morphology, lifecycle, and accessory photosynthetic pigmentation. V. brassicaformis has a green color, with a complex lifecycle involving multiple pathways and a range of sizes and morphologies, while Chromera has a brown color and cycles through a simpler process from generation to generation. The color differences are due to differences in accessory pigments.
Parvilucifera is a genus of marine alveolates that parasitise dinoflagellates. Parvilucifera is a parasitic genus described in 1999 by Norén et al. It is classified perkinsozoa in the supraphylum of Alveolates. This taxon serves as a sister taxon to the dinoflagellates and apicomplexans. Thus far, five species have been described in this taxon, which include: P.infectans, P.sinerae, P.corolla, P.rostrata, and P.prorocentri. The genus Parvilucifera is morphologically characterized by flagellated zoospore. The life cycle of the species in this genus consist of free-living zoospores, an intracellular stage called trophont, and asexual division to form resting sporangium inside host cell. This taxon has gained more interest in research due to its potential significance in terms of negative regulation for dinoflagellates blooms, that have proved harmful for algal species, humans, and the shellfish industry.
Perkinsidae is a family of alveolates in the phylum Perkinsozoa, a sister group to the dinoflagellates.
Polykrikos kofoidii is a species of phagotrophic marine pseudocolonial dinoflagellates that can capture and engulf other protist prey, including the toxic dinoflagellate, Alexandrium tamarense. P. kofoidii is of scientific interest due to its status as a predator of other dinoflagellates, a behavior that is significant in the control of algal blooms. It has a complex life cycle of both vegetative (asexual) and sexual reproduction complicated by its pseudocolonial structure.
The Polykrikaceae are a family of athecate dinoflagellates of the order Gymnodiniales. Members of the family are known as polykrikoids. The family contains two genera: Polykrikos and Pheopolykrikos.
Ceratoperidinium is a genus of dinoflagellates in the order Gymnodiniales. The genus contains two species. It was first created in 1969 by Margalef, with Ceratoperidinium yeye as the type species. However, because it was not correctly described it was considered invalid, as was C. yeye. In 1980, Lobelich III described the genus as Ceratoperidinium Margalef ex Loeblich III, renaming C. yeye as C. margalefii. In 2014, Gyrodinium falcatum was reassigned to Ceratoperidinium based on genetic analysis.
Coccidinium is a genus of parasitic syndinian dinoflagellates that infect the nucleus and cytoplasm of other marine dinoflagellates. Coccidinium, along with two other dinoflagellate genera, Amoebophyra and Duboscquella, contain species that are the primary endoparasites of marine dinoflagellates. While numerous studies have been conducted on the genus Amoebophyra, specifically Amoebophyra ceratii, little is known about Coccidinium. These microscopic organisms have gone relatively unstudied after the initial observations of Édouard Chatton and Berthe Biecheler in 1934 and 1936.
Haplozoon (/hæploʊ’zoʊən/) are unicellular endo-parasites, primarily infecting maldanid polychaetes. They belong to Dinoflagellata but differ from typical dinoflagellates. Most dinoflagellates are free-living and possess two flagella. Instead, Haplozoon belong to a 5% minority of parasitic dinoflagellates that are not free-living. Additionally, the Haplozoon trophont stage is particularly unique due to an apparent lack of flagella. The presence of flagella or remnant structures is the subject of ongoing research.
