Keratinases are proteolytic enzymes that digest keratin. [1]
They were initially classified as 'proteinases of unknown mechanism' by the Nomenculture Committee on the International Union of Biochemistry in 1978 with EC number 3.4.99 in 1983 (Owen et al., 1983). In the 1990s, they were defined as a serine proteases due to high sequence homology with alkaline protease, and their inhibition by serine protease inhibitors (Wang et al., 1995; Taha et al., 1998 and Bressollier et al., 1999).
Keratin is protease resistant due to its compaction, rigidity, crosslinking and hydrophobicity. [2] [3] [4] Hydrophobic and electrostatic interactions attach keratinase to keratin surfaces, enabling proteolysis. [5] The primary catalytic mechanism consists of serine protease activity combined with high specificity for compact substrates and exposed active sites. Additional disulfide bond cleavage by other means is often required for complete degradation. [6]
Keratinases are produced only in the presence of keratin-containing substrate. Keratinase production has been reported in various microorganisms including fungi and bacteria, and occurs at near-alkaline pH and thermophilic temperatures. These enzymes have a broad substrate specificity, degrading fibrous proteins such as fibrin, elastin and collagen, and non-fibrous proteins such as casein, bovine serum albumin and gelatin. (Noval et al., 1959; Mukhapadhayay et al., 1989; Dozie et al., 1994; Lin et al., 1995; Letourneau et al., 1998; and Bressollier et al., 1999).
At first Molyneux et al. (1959) attempted to isolate some bacteria that are able to degrade keratin. [7] He isolated organisms from the contents of experimentally induced dermoid cysts from mid lateral region of sheep. Examination of wool sample showed degraded wool with numerous corticle and cyticular cells. He found disruption of wool fiber in both in vivo and in vitro. He showed that the organisms belong to genus Bacillus and the organism was capable of attacking native wool protein. The same year Noval et al. (1959) published another article on enzymatic decomposition of native keratin by Streptomyces fradiae. They showed extracellular enzyme secreted by these bacteria capable of degrading the human hair in its native state.
Keratinolytic protein from keratinophilic fungi were reported by Yu et al. (1968), Asahi et al. (1985), and Willams et al. (1989). Mukhopadhay et al. (1989) reported keratinase production by Streptomyces sp. He isolated an inducible extracellular homogeneous enzyme, which shows a 7.5-fold increases in its activity after DEAE cellulose column chromatography. The enzyme-activity was inhibited by reduced glutathione, PMSF and 2-¬Mercaptaethanol.
Williams et al. (1990) continued his work on enriched feather degrading culture and characterized the organism to its species level for the first time. [8] The microorganisms were identified as Bacillus licheniformis, [9] purified and characterized keratinase from feather degrading Bacillus licheniformis strain isolated by Williams et al. (1990) with the help of membrane ultra filtration and C-75 gel chromatography. He purified enzyme with 70-fold increased activity. SDS-PAGE analysis revealed that purified keratinase had a molecular weight of 33 kDa. Dozie et al. (1994) reported a thermostable, alkaline-active, keratinolytic proteinasefrom Chrysosporium keratinophylum which was able to solubilize keratin in lactose-mineral salt medium with DMSO. Optimum pH for the enzyme activity was 9 and optimum temperature was 90 °C. Wang et al. (1999) scaled up the fermentation condition of keratinase to a pilot scale fermentar. They optimized the fermentation condition to a level of 10-fold increase in enzyme production. [10]
Dictyoglomus is a genus of bacterium, given its own Phylum, called the Dictyoglomi. This organism is extremely thermophilic, meaning it thrives at extremely high temperatures. It is chemoorganotrophic, meaning it derives energy by metabolizing organic molecules. This organism is of interest because it elaborates an enzyme, xylanase, which digests xylan, a heteropolymer of the pentose sugar xylose. By pretreating wood pulp with this enzyme, paper manufacturers can achieve comparable levels of whiteness with much less chlorine bleach.
Serine proteases are enzymes that cleave peptide bonds in proteins. Serine serves as the nucleophilic amino acid at the (enzyme's) active site. They are found ubiquitously in both eukaryotes and prokaryotes. Serine proteases fall into two broad categories based on their structure: chymotrypsin-like (trypsin-like) or subtilisin-like.
A catalytic triad is a set of three coordinated amino acids that can be found in the active site of some enzymes. Catalytic triads are most commonly found in hydrolase and transferase enzymes. An acid-base-nucleophile triad is a common motif for generating a nucleophilic residue for covalent catalysis. The residues form a charge-relay network to polarise and activate the nucleophile, which attacks the substrate, forming a covalent intermediate which is then hydrolysed to release the product and regenerate free enzyme. The nucleophile is most commonly a serine or cysteine amino acid, but occasionally threonine or even selenocysteine. The 3D structure of the enzyme brings together the triad residues in a precise orientation, even though they may be far apart in the sequence.
Bacillus licheniformis is a bacterium commonly found in the soil. It is found on bird feathers, especially chest and back plumage, and most often in ground-dwelling birds and aquatic species.
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The enzyme ectoine synthase (EC ) catalyzes the chemical reaction
The enzyme xanthan lyase catalyzes the following process:
In enzymology, a diaminobutyrate acetyltransferase (EC 2.3.1.178) is an enzyme that catalyzes the chemical reaction
In enzymology, a diaminobutyrate-2-oxoglutarate transaminase is an enzyme that catalyzes the chemical reaction
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Transmembrane protease, serine 6 is an enzyme that in humans is encoded by the TMPRSS6 gene.
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In molecular biology, glycoside hydrolase family 52 is a family of glycoside hydrolases.
Streptogrisin A is an enzyme. This enzyme catalyses the following chemical reaction
Streptogrisin B is an enzyme. This enzyme catalyses the following chemical reaction
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The sedolisin family of peptidases are a family of serine proteases structurally related to the subtilisin (S8) family. Well-known members of this family include sedolisin ("pseudomonalisin") found in Pseudomonas bacteria, xanthomonalisin ("sedolisin-B"), physarolisin as well as animal tripeptidyl peptidase I. It is also known as sedolysin or serine-carboxyl peptidase. This group of enzymes contains a variation on the catalytic triad: unlike S8 which uses Ser-His-Asp, this group runs on Ser-Glu-Asp, with an additional acidic residue Asp in the oxyanion hole.