| Telmatobacter | |
|---|---|
Scientific classification  | |
| Domain: | Bacteria |
| Phylum: | Acidobacteriota |
| Class: | "Acidobacteriia" |
| Order: | Acidobacteriales |
| Family: | Acidobacteriaceae |
| Genus: | Telmatobacter Pankratov & Dedysh, 2012 |
| Type species | |
| Telmatobacter bradus Pankratov & Dedysh 2012 | |
| Species | |
Telmatobacter is a genus of bacteria in the family Acidobacteriaceae. [1]
Telmatobacter was first described in 2012. The name derives from the Greek noun telma–atos, meaning swamp or bog, and the noun bacter meaning short rod.
Telmatobacter is a genus of Gram-negative bacteria. They appear as motile, single rods. Telmatobacter reproduce by normal cell division and do not form spores. They are facultative anaerobes as well as chemo-organotrophs. They prefer to grow with sugars and pectin as growth substrates, although they are capable of fermenting sugars and several polysaccharides, including crystalline cellulose. They prefer acidic conditions and moderate temperatures, and they grow better on liquid medium than solid agar medium. Unlike some other bacteria, Telmatobacter do not produce hydrogen sulfide gas from thiosulfate, nor indole from tryptophan. Salt inhibits growth at concentrations above 0.1% (w/v). The DNA G+C content is 57.6%. Telmatobacter are found in acidic wetlands, specifically Sphagnum peat bogs. The only and type species is Telmatobacter bradus. [2]
An anaerobic organism or anaerobe is any organism that does not require molecular oxygen for growth. It may react negatively or even die if free oxygen is present. In contrast, an aerobic organism (aerobe) is an organism that requires an oxygenated environment. Anaerobes may be unicellular or multicellular. Most fungi are obligate aerobes, requiring oxygen to survive. However, some species, such as the Chytridiomycota that reside in the rumen of cattle, are obligate anaerobes; for these species, anaerobic respiration is used because oxygen will disrupt their metabolism or kill them. Deep waters of the ocean are a common anoxic environment.
A mesophile is an organism that grows best in moderate temperature, neither too hot nor too cold, with an optimum growth range from 20 to 45 °C. The optimum growth temperature for these organisms is 37°C. The term is mainly applied to microorganisms. Organisms that prefer extreme environments are known as extremophiles. Mesophiles have diverse classifications, belonging to two domains: Bacteria, Archaea, and to kingdom Fungi of domain Eucarya. Mesophiles belonging to the domain Bacteria can either be gram-positive or gram-negative. Oxygen requirements for mesophiles can be aerobic or anaerobic. There are three basic shapes of mesophiles: coccus, bacillus, and spiral.
A coccus is any bacterium or archaeon that has a spherical, ovoid, or generally round shape. Bacteria are categorized based on their shapes into three classes: cocci (spherical-shaped), bacillus (rod-shaped) and spiral. Coccus refers to the shape of the bacteria, and can contain multiple genera, such as staphylococci or streptococci. Cocci can grow in pairs, chains, or clusters, depending on their orientation and attachment during cell division. In contrast to many bacilli-shaped bacteria, most cocci bacteria do not have flagella and are non-motile.
Sulfur-reducing bacteria are microorganisms able to reduce elemental sulfur (S0) to hydrogen sulfide (H2S). These microbes use inorganic sulfur compounds as electron acceptors to sustain several activities such as respiration, conserving energy and growth, in absence of oxygen. The final product of these processes, sulfide, has a considerable influence on the chemistry of the environment and, in addition, is used as electron donor for a large variety of microbial metabolisms. Several types of bacteria and many non-methanogenic archaea can reduce sulfur. Microbial sulfur reduction was already shown in early studies, which highlighted the first proof of S0 reduction in a vibrioid bacterium from mud, with sulfur as electron acceptor and H
2 as electron donor. The first pure cultured species of sulfur-reducing bacteria, Desulfuromonas acetoxidans, was discovered in 1976 and described by Pfennig Norbert and Biebel Hanno as an anaerobic sulfur-reducing and acetate-oxidizing bacterium, not able to reduce sulfate. Only few taxa are true sulfur-reducing bacteria, using sulfur reduction as the only or main catabolic reaction. Normally, they couple this reaction with the oxidation of acetate, succinate or other organic compounds. In general, sulfate-reducing bacteria are able to use both sulfate and elemental sulfur as electron acceptors. Thanks to its abundancy and thermodynamic stability, sulfate is the most studied electron acceptor for anaerobic respiration that involves sulfur compounds. Elemental sulfur, however, is very abundant and important, especially in deep-sea hydrothermal vents, hot springs and other extreme environments, making its isolation more difficult. Some bacteria – such as Proteus, Campylobacter, Pseudomonas and Salmonella – have the ability to reduce sulfur, but can also use oxygen and other terminal electron acceptors.
The Bacillaceae are a family of gram-positive, heterotrophic, rod-shaped bacteria that may produce endospores. Motile members of this family are characterized by peritrichous flagella. Some Bacillaceae are aerobic, while others are facultative or strict anaerobes. Most are not pathogenic, but Bacillus species are known to cause disease in humans.
Leuconostoc mesenteroides is a species of lactic acid bacteria associated with fermentation, under conditions of salinity and low temperatures. In some cases of vegetable and food storage, it was associated with pathogenicity. L. mesenteroides is approximately 0.5-0.7 µm in diameter and has a length of 0.7-1.2 µm, producing small grayish colonies that are typically less than 1.0 mm in diameter. It is facultatively anaerobic, Gram-positive, non-motile, non-sporogenous, and spherical. It often forms lenticular coccoid cells in pairs and chains, however, it can occasionally form short rods with rounded ends in long chains, as its shape can differ depending on what media the species is grown on. L. mesenteroides grows best at 30°C, but can survive in temperatures ranging from 10°C to 30°C. Its optimum pH is 5.5, but can still show growth in pH of 4.5-7.0.
Thermoanaerobacter is a genus in the phylum Bacillota (Bacteria). Members of this genus are thermophilic and anaerobic, several of them were previously described as Clostridium species and members of the now obsolete genera Acetogenium and Thermobacteroides
Acidaminobacter is a genus in the phylum Bacillota (Bacteria).
Actibacter is a genus in the phylum Bacteroidota (Bacteria). The genus contains a single species, namely A. sediminis.
Afifella is a genus in the phylum Pseudomonadota (Bacteria). Afifella are found in marine and estuarine settings, including microbial mats. They are anaerobes, with one cultured representative capable of photosynthesis.
Deefgea is a genus of bacteria in the phylum Pseudomonadota. Deefgea are described as Gram-negative, rod-shaped, facultative anaerobes which generally occur singly. Deefgea are motile, either by a single flagellum or two polar flagella. They are both catalase and oxidase positive.
Dendrosporobacter is a genus in the phylum Bacillota (Bacteria). Members of the class Negativicutes, stain gram negative, despite being firmicutes
Algibacter is a genus in the phylum Bacteroidota (Bacteria).
Paenibacillus tylopili is a soil-dwelling, Gram-positive, rod-shaped bacterium. Described as new to science in 2008, it was found in the mycorhizosphere of the bolete fungus Tylopilus felleus.
Acidobacterium capsulatum is a bacterium. It is an acidophilic chemoorganotrophic bacterium containing menaquinone. It is gram-negative, facultative anaerobic, mesophilic, non-spore-forming, capsulated, saccharolytic and rod-shaped. It is also motile by peritrichous flagella. Its type strain is JCM 7670.
Rhodoferax is a genus of Betaproteobacteria belonging to the purple nonsulfur bacteria. Originally, Rhodoferax species were included in the genus Rhodocyclus as the Rhodocyclus gelatinous-like group. The genus Rhodoferax was first proposed in 1991 to accommodate the taxonomic and phylogenetic discrepancies arising from its inclusion in the genus Rhodocyclus. Rhodoferax currently comprises four described species: R. fermentans, R. antarcticus, R. ferrireducens, and R. saidenbachensis. R. ferrireducens, lacks the typical phototrophic character common to two other Rhodoferax species. This difference has led researchers to propose the creation of a new genus, Albidoferax, to accommodate this divergent species. The genus name was later corrected to Albidiferax. Based on geno- and phenotypical characteristics, A. ferrireducens was reclassified in the genus Rhodoferax in 2014. R. saidenbachensis, a second non-phototrophic species of the genus Rhodoferax was described by Kaden et al. in 2014.
Virgibacillus is a genus of Gram-positive, rod-shaped (bacillus) bacteria and a member of the phylum Bacillota. Virgibacillus species can be obligate aerobes, or facultative anaerobes and catalase enzyme positive. Under stressful environmental conditions, the bacteria can produce oval or ellipsoidal endospores in terminal, or sometimes subterminal, swollen sporangia. The genus was recently reclassified from the genus Bacillus in 1998 following an analysis of the species V. pantothenticus. Subsequently, a number of new species have been discovered or reclassified as Virgibacillus species.
Caldibacillus is a facultative anaerobe genus of bacteria that stains Gram-positive from the family of Bacillaceae. The type species of this genus is Caldibacillus debilis.
Salisediminibacterium halotolerans is a gram-positive, alkalitolerant, and halophilic bacterium from the family Bacillaceae and genus of Salisediminibacterium, which was one of three bacterial strains, and the only novel species, isolated from sediments from the Xiarinaoer soda lake in Mongolia in 2012.
Mangrovibacter is a genus in the order Enterobacterales. Members of the genus are Gram-stain-negative, facultatively anaerobic, nitrogen-fixing, and rod shaped. The name Mangrovibacter derives from:
Neo-Latin noun mangrovum, mangrove; Neo-Latin masculine gender noun, a rod; bacter, nominally meaning "a rod", but in effect meaning a bacterium, rod; Neo-Latin masculine gender noun Mangrovibacter, mangrove rod.
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