Haplogroup T-L206

Last updated
Haplogroup T-L206
Possible time of origin26,800 BP [1]
Possible place of origin Western Asia [2] [3] [4]
Ancestor T (T-M184)
Descendants T1a (T-M70)

Haplogroup T-L206, also known as haplogroup T1, is a human Y-chromosome DNA haplogroup. The SNP that defines the T1 clade is L206. The haplogroup is one of two primary branches of T (T-M184), the other subclade being T2 (T-PH110).

Contents

T1 is the most common descendant of the T-M184 haplogroup, being the lineage of more than 95% of all T-M184 members in Africa and Eurasia (as well as countries to which those populations have migrated in the modern era, in the Americas and Australasia). T1 lineages are now found at high frequencies among northern Somali clans. It is hypothesized that T1* (if not some of its subclades) originated in Western Asia, and spread into Europe and North Africa with the Pre-Pottery Neolithic B culture (PPNB).

The basal clade T1* is rare, but has been found in at least three males from widely separated regions: a Berber from Tunisia, a Syrian, and a Macedonian. [5] [6] [7]

T-L206's sole primary branch, T1a (M70), is believed to have originated about 15,900 – 23,900 BP, [8] in the Levant. It appears that a number of individuals bearing T-M70 later migrated south to Africa. [9]

Structure

Phylogenetic T-M184 tree Phylogenetic T-M184 tree.png
Phylogenetic T-M184 tree

Subclade distribution

T1* (T-L206*)

This lineage could have arrived in the Levant through the PPNB expansion from northeastern Anatolia.

PopulationLanguageLocationMembers/Sample sizePercentageSourceNotes
Berbers Siwi (Berber) Sejenane 1/472.1% [5]
Syrians Unspecified Syria 1/951.1% [6]
Macedonians Macedonian
(Balto-Slavic)		 Macedonia 1/2010.5% [7] Orthodox Christians of Macedonian ethnicity

T1a (M70)

Initial research on T1a-M70 (previously K2)

M70 is believed to have originated in Asia after the emergence of the K-M9 polymorphism (45–30 ky) (Underhill et al. 2001a). As deduced from the collective data (Underhill et al. 2000; Cruciani et al. 2002; Semino et al. 2002; present study), K2-M70 individuals, at some later point, proceeded south to Africa. While these chromosomes are seen in relatively high frequencies in Egypt, Oman, Tanzania, Ethiopia, they are especially prominent in the Fulbe 18%( [Scozzari et al. 1997, 1999])

J. R. Luis et al. 2004, [10]

Three genetically different populations in the Balearic Islands, Catalonia, Spain

The population of the Pityusic Islands does present a clear genetic divergence in relation to the Mallorcan and Menorcan populations. Neither [does it show] a confluence with the Catalan and Valencian populations ... [T]he data provided by the Pityusic population [compared] with other circumediterranean populations surprises [in] that practically there is no convergence with any of these populations, not even with ... North African populations. The Pityusic case is paradigmatic: ... some markers shows affinities with [Middle Eastern] ... mtDNA variables ... but [the Pityusic population] diverges from these populations when considering other markers. [It] is a separate case, a island, not [just] in the geographical sense but [also a] genetical [island].

Misericòrdia Ramon Juanpere et al.,1998-2004

PopulationLanguageLocationMembers/Sample sizePercentageSourceNotes
Pityusic Islands Eivissenc (Ibizan) (Romance) Ibiza, Balearic Islands, Catalonia, Spain 9/5416.7% [11] [12] L454+. All individuals carry typical Ibizan surnames and had paternal grandfathers born in Ibiza.
Pityusic IslandsEivissencIbiza7/967.3% [13] L454+
Pityusic IslandsEivissencIbiza3/456.7% [14] L454+

T1a1 (L162; xL208)

T1a1 formed 17,400-14,600 BP, is the largest lineage downstream from T1a-M70 and became widespread across Eurasia and Africa before the modern era.

This extremely rare subclade has been found in Ibizan (Eivissan) islanders and Pontic Greeks from Giresun. The first Y-STR haplotype belonging to this lineage appeared in the paper of Tomas et al in 2006 among a sample of Eivissan individuals but is not until August 2009 when the first T1a1-L162(xL208) individual was reported in a 23andMe customer of Pontic Greek background and Metaxopoulos surname, thanks to the public Adriano Squecco's Y-Chromosome Genome Comparison Project.

Pontic Greeks from Giresun descend from Sinope colonists and Sinope was colonised by Ionians from Miletus. It is interesting to note that there existed an Ionian colony known as Pityussa, just like the known Greek name for Eivissa Pityuses. In Eivissa, archaeological findings include the famous bust of Demeter which has been confused with the Punic goddess Tanit for decades. The bust belonging to Demeter has been analysed and was found to contain black particles of volcanic sand, originating from Mount Etna. It is thought that the bust was made in Sicily, with red clays typical of the eastern Trinacria, which was colonized by the Ionians. The Ionians could be arrived to Eivissa c.2700 YBP. This lineage could be an Ionian marker. T1a1 formed 17,400-14,600 BP, is the largest lineage downstream from T1a-M70 and became widespread across Eurasia and Africa before the modern era.

T1a1a (L208)

This lineage, formed 14,200-11,000 BP, is the largest branch downstream T1a1-L162. First discovered and reported in August 2009 in a 23andMe customer of Iberian ancestry that participated in the public Squecco's Y-Chromosome Genome Comparison Project and appearing there as "Avilés" and as "AlpAstur" in 23andMe. Named as "L208" at November 2009.

T1a1a1a1b1a1 (Y3782; xY3836)

PopulationLanguageLocationMembers/Sample sizePercentageSourceNotes
Sardinians Campidanese (Romance languages) Casteddu 1/1870.5% [15]

T1a1a1a1b1a1a (Y3836)

This lineage is mostly found among individuals from the Iberian Peninsula, where is found their highest diversity. The first Y-STR haplotype of this lineage, characterized by DYS437=13, was found in the public FTDNA Y-DNA Haplogroup T project, appearing there at April 2009 as kit E8011. However, is not until June 2014 when the Y-SNP Y3836 was discovered in the public YFULL project among two of their participants of Iberian ancestry, appearing there as YF01637 and YF01665.

PopulationLanguageLocationMembers/Sample sizePercentageSourceNotes
Panamanians Panamian Castilian (Romance languages) Los Santos Province 1/303.3% [16]
Colombians Colombian Castilian (Romance languages) Caldas 2/752.7%YHRDMestizo individuals
Panamanians Panamian Castilian (Romance languages) Panama Province 1/432.3% [16]
Northwest Argentinians Argentinian Castilian (Romance languages)Mountainous region of Jujuy 1/502% [17] YHRDAdmixed population
Puerto Ricans Puerto Rican Castilian (Romance languages)Southeast Puerto Rico 2/1101.8% [18]
Northeastern Portuguese Jews Judaeo-Portuguese (Romance) Bragança, Argozelo, Carção, Mogadouro, and Vilarinho dos Galegos 1/571.8% [19] [20] [21]
Native Mirandese speakers Mirandese Astur-leonese (Romance) Miranda de l Douro 1/581.7% [22] [23]
Dominicans Dominican Castilian (Romance languages) Dominican Republic 4/2611.5% [24]
Panamanians Panamian Castilian (Romance languages) Chiriquí Province 1/921.1% [16]
Mecklenburgers East Low Saxon (West Germanic) Rostock 2/2001% [25]
Colombians Colombian Castilian (Romance languages) Bogotá 2/1951%YHRDMestizo individuals
Colombians Colombian Castilian (Romance languages) Valle del Cauca 1/1031%YHRDMestizo individuals
Venezuelans Venezuelan Castilian (Romance languages) Maracaibo 1/1110.9% [26]
Venezuelans Venezuelan Castilian (Romance languages) Central Region 1/1150.9% [27]
Europeans Brazilian Portuguese (Romance languages) São Paulo 1/1200.8YHRDEuropean descents
Ecuadorians Ecuadorian Castilian (Romance languages) Quito 1/1200.8% [28]
Colombians Colombian Castilian (Romance languages) Antioquia 6/7770.7% [29]
Mexicans Mexican Castilian (Romance languages) Tuxtla Gutiérrez 1/1540.7YHRDMestizo individuals
Mexicans Mexican Castilian (Romance languages) Mérida 1/1590.6%YHRDMestizo individuals
Eastern Andalusians Andalusian (Romance) Granada 1/1800.6% [30]
Colombians Colombian Castilian (Romance languages) Santander 1/1930.5%YHRDMestizo individuals
Chileans Chilean Castilian (Romance languages) Concepción 1/1980.5%YHRD
Mexicans Mexican Spanish (Romance languages) Guadalajara 1/2460.4%YHRDMestizo individuals
Europeans Brazilian Portuguese (Romance languages) Rio Grande do Sul 1/2550.4% [31]

Geographical distribution

Europe

Cretan Greeks from Lasithi possess Haplogroup T, almost certainly T1a (M70), at a level of 18% (9/50). [32]

Unconfirmed but probable T-M70+ : 14% (3/23) of Russians in Yaroslavl, [33] 12.5% (3/24) of Italians in Matera, [34] 10.3% (3/29) of Italians in Avezzano, [34] 10% (3/30) of Tyroleans in Nonstal, [34] 10% (2/20) of Italians in Pescara, [34] 8.7% (4/46) of Italians in Benevento, [34] 7.8% (4/51) of Italians in South Latium, [35] 7.4% (2/27) of Italians in Paola, [34] 7.3% (11/150) of Italians in Central-South Italy, [36] 7.1% (8/113) of Serbs in Serbia, [37] 4.7% (2/42) of Aromanians in Romania, [38] 3.7% (3/82) of Italians in Biella, [39] 3.7% (1/27) of Andalusians in Córdoba, [40] 3.3% (2/60) of Leoneses in León, [40] 3.2% (1/31) of Italians in Postua, [39] 3.2% (1/31) of Italians in Cavaglià, [39] 3.1% (3/97) of Calabrians in Reggio Calabria, [41] 2.8% (1/36) of Russians in Ryazan Oblast, [42] 2.8% (2/72) of Italians in South Apulia, [43] 2.7% (1/37) of Calabrians in Cosenza, [41] 2.6% (3/114) of Serbs in Belgrade, [44] 2.5% (1/40) of Russians in Pskov, [33] 2.4% (1/42) of Russians in Kaluga, [33] 2.2% (2/89) of Transylvanians in Miercurea Ciuc, [45] 2.2% (2/92) of Italians in Trino Vercellese, [39] 1.9% (2/104) of Italians in Brescia, [46] 1.9% (2/104) of Romanians in Romania, [47] 1.7% (4/237) of Serbs and Montenegrins in Serbia and Montenegro, [48] 1.7% (1/59) of Italians in Marche, [43] 1.7% (1/59) of Calabrians in Catanzaro, [41] 1.6% (3/183) of Greeks in Northern Greece, [49] 1.3% (2/150) of Swiss Germans in Zürich Area, [50] 1.3% (1/79) of Italians in South Tuscany and North Latium, [43] 1.1% (1/92) of Dutch in Leiden, [51] 0.5% (1/185) of Serbs in Novi Sad (Vojvodina), [52] 0.5% (1/186) of Polish in Podlasie [53]

Middle East & Caucasus

PopulationLanguageLocationMembers/Sample sizePercentageSourceNotes
Iraqi Jews Judeo-Iraqi Arabic (Central Semitic) Iraq 7/3221.9% [6] 12.5% T1a1a1a1a1a1-P77 and 9.4% T1a3-Y11151
Armenian Sasuntzis Western Armenian dialect, Kurmanji and Dimli (Northwestern Iranian) languages Sasun 21/10420.2% [2] T1a1 and T1a2 subclades
Kurdish Jews Judeo-Aramaic (Central Semitic) Kurdistan 9/5018% [6] 10% T1a1a1a1a1a1-P77 and 8% T1a1-L162
Iranian Jews Judeo-Iranian (Southwestern Iranian) Iran 3/2213.6% [6] 4.5% T1a1a1a1a1a1-P77 and 9.1% T1a3-Y11151
Mountain Jews Judeo-Tat (Southwestern Iranian) Derbentsky District 2/1711.8% [54] All belong to T1a1a1a1a1a1-P77
Not specifiedNot specified Birjand 1/273.7% [55] All T1a3-Y12871
Not specifiedNot specified Mashhad 2/1291.6% [55] 0.8% T1a3-Y11151 (xY8614)

Unconfirmed but probable T-M70+ : 28% (7/25) of Lezginians in Dagestan, [56] 21.7% (5/23) of Ossetians in Zamankul, [57] 14% (7/50) of Iranians in Isfahan, [56] 13% (3/23) of Ossetians in Zil'ga, [57] 12.6% (11/87) of Kurmanji Kurds in Eastern Turkey, [58] 11.8% (2/17) of Palestinian Arabs in Palestine, [59] 8.3% (1/12) of Iranians in Shiraz, [60] 8.3% (2/24) of Ossetians in Alagir, [57] 8% (2/25) of Kurmanji Kurds in Georgia, [58] 7.5% (6/80) of Iranians in Tehran, [56] [61] 7.4% (10/135) of Palestinian Arabs in Israeli Village, [59] 7% (10/143) of Palestinian Arabs in Israel and Palestine, [59] 5% (1/19) of Chechens in Chechenia, [56] [61] 4.2% (3/72) of Azerbaijanians in Azerbaijan, [56] [61] 4.1% (2/48) of Iranians in Isfahan, [61] 4% (4/100) of Armenians in Armenia, [56] [61] 4% (1/24) of Bedouins in Israel [59] and 2.6% (1/39) of Turks in Ankara. [61]

North & East Asia

Barghut Mongolians from |different localities of Hulun Buir Aimak have T1a (M70) at a level of 1.3% (1/76). [62] In the 12–13th centuries, the Barga (Barghuts) Mongols appeared as tribes near Lake Baikal, named Bargujin.

Unconfirmed but probable T-M70+: 2% (4/204) of Hui in Liaoning province, [63] and 0.9% (1/113) of Bidayuh in Sarawak. [64]

South Asia

Haplogroup T1a-M70 in South Asia is considered to be of West Eurasian origin. [65]

The Garo people of Tangail District appear to possess T-P77 (T1a1a1b2b2b1a) at a rate of 0.8% (1/120). [66] ||Likely +

Unconfirmed but probable T-M70+ : 56.6% (30/53) of Kunabhis in Uttar Kannada, [67] 32.5% (13/40) of Kammas in Andhra Pradesh, [68] 26.8% (11/41) of Brahmins in Visakhapatnam, [68] 25% (1/4) of Kattunaiken in South India, [69] 22.4% (11/49) of Telugus in Andhra Pradesh, [70] 20% (1/5) of Ansari in South Asia, (2/20) of Poroja in Andhra Pradesh, [68] 9.8% (5/51) of Kashmiri Pandits in Kashmir, [71] 8.2% (4/49) of Gujars in Kashmir, [71] 7.7% (1/13) of Siddis (migrants from Ethiopia) in Andhra Pradesh, [68] 5.5% (3/55) of Adi in Northeast India, [72] 5.5% (7/128) of Pardhans in Adilabad, [70] 5.3% (2/38) of Brahmins in Bihar, [71] 4.3% (1/23) of Bagata in Andhra Pradesh, [68] 4.2% (1/24) of Valmiki in Andhra Pradesh, [68] (1/32) of Brahmins in Maharashtra, [71] 3.1% (2/64) of Brahmins in Gujarat, [71] 2.9% (1/35) of Rajput in Uttar Pradesh, [73] 2.3% (1/44) of Brahmins in Peruru, [68] and 1.7% (1/59) of Manghi in Maharashtra. [70]

Also in Desasth-Brahmins in Maharashtra (1/19 or 5.3%) and Chitpavan-Brahmins in Konkan (1/21 or 4.8%), Chitpavan-Brahmins in Konkan (2/66 or 3%).

Africa

PopulationLanguageLocationMembers/Sample sizePercentageSourceNotes
Somalis (Dir clan) Somali (East Cushitic) Djibouti 24/24100% [74] The main sub-clans of the Dir clan in Djibouti are the Issa and Gadabuursi.
Somalis (Dire Dawa) Somali (East Cushitic) Dire Dawa 14/1782.4% [75] Dir sub-clans of Dire Dawa are Issa, Gurgura and Gadabuursi.
Anteony Antemoro (Plateau Malagasy) old Antemoro Kingdom 22/3759.5% [76] The Anteony are the descendants of aristocrats, from whom the Antemoro king is chosen. Can be grouped into the Silamo, because they have the right to undertake the ritual slaughter of animals (Sombily)
Somalis (Dir clan) and Afars Somali and Afar (East Cushitic) Djibouti 30/5456.6% [77] Mixed sample of Somali and Afar individuals.[ failed verification ]
Somalis (Ethiopia) Somali (East Cushitic) Shilavo (woreda) (Ogaden)5/1050% [74] The geographic location of this Ethiopia sample as seen in Fig.1.
Somalis (Isaaq) Somali (East Cushitic) Somaliland 4/4100% [78] All belonging to the T1a-Y16897 subclade
Toubou Toubou Chad 31% [79] All belonging to the T1a-PF5662 subclade
Lemba Venda and Shona (Bantu) Zimbabwe/South Africa 6/3417.6% [6] Exclusively belong to T1a2* (old T1b*). Possible recent founder effect. Low frequency of T1a2 has been observed in Bulgarian Jews and Turks but is not found in other Jewish communities. Y-str Haplotypes close to some T1a2 Armenians.
Baribas Baatonum (Niger–Congo) Benin 1/571.8% [80] T1a-M70(xT1a2-L131)

Ancient DNA

'Ain Ghazal, 9,573 BP

Ain Ghazal T-M184Ghazal-I
IDI1707 AG83_5 Poz-81097
Y DNAT1-PF5610 (xT1a1-Z526, T1a1a-CTS9163, T1a1a-CTS2607, T1a2-S11611, T1a2-Y6031, T1a2a1-P322, T1a3a-Y9189)
PopulationNeolithic Farmers
Language
Culture Late Middle PPNB
Date (YBP)9573 ± 39
House / Location Ain Ghazal
Members / Sample Size1/2
Percentage50%
mtDNA R0a
Isotope Sr
Eye ColorLikely non-Dark
Hair ColorLikely non-Dark
Skin PigmentationLight
ABO Blood GroupLikely O or B
Diet (d13C%0 / d15N%0)
FADS activityrs174551 (T), rs174553 (G), rs174576 (A)
Lactase PersistenceLikely lactose-intolerant
Oase-1 Shared DNA14.2%
Ostuni1 Shared DNA6.7%
Neanderthal Vi33.26 Shared DNA0.93%
Neanderthal Vi33.25 Shared DNA1.2%
Neanderthal Vi33.16 Shared DNA0.3%
Ancestral Components (AC)Neolithic Anatolia/Southeast Europe: 56.82%, Paleolithic Levant (Natufians): 24.09%, Caucasus Hunter / Early European Farmer: 12.51%, Scandinavian / West European Hunter: 4.16%, Sub Saharan: 2.04%, East European Hunter: 0.37%
puntDNAL K12 Ancient
Dodecad [dv3]
Eurogenes [K=36]
Dodecad [Globe13]
Genetic Distance
Parental Consanguinity
Age at Death
Death Position
SNPs152.234
Read Pairs
Sample
Source [81]
NotesEvidence of a northerly origin for this population, possibly indicating an influx from the region of northeastern Anatolia.

Haplogroup T is found among the later Middle Pre-Pottery Neolithic B (MPPNB) inhabitants from the 'Ain Ghazal archaeological site (in modern Jordan). It was not found among the early and middle MPPNB populations. It is thought that the Pre-Pottery Neolithic B population is mostly composed of two different populations: members of early Natufian civilisation and a population resulting from immigration from the north, i.e. north-eastern Anatolia. However, Natufians have been found to belong mostly to the E1b1b1b2 lineage – which is found among 60% of the whole PPNB population and 75% of the 'Ain Ghazal population, being present in all three MPPNB stages.

Later MPPNB populations in the Southern Levant were already witnessing severe changes in climate that would have been exacerbated by large population demands on local resources. Beginning at 8.9 cal ka BP we see a significant decrease in population in highland Jordan, ultimately leading to the complete abandonment of almost all central settlements in this region. [82]

The 9th millennium Pre-Pottery Neolithic B (PPNB) period in the Levant represents a major transformation in prehistoric lifeways from small bands of mobile hunter–gatherers to large settled farming and herding villages in the Mediterranean zone, the process having been initiated some 2–3 millennia earlier.

'Ain Ghazal (" Spring of the Gazelles") is situated in a relatively rich environmental setting immediately adjacent to the Wadi Zarqa, the longest drainage system in highland Jordan. It is located at an elevation of about 720m within the ecotone between the oak-park woodland to the west and the open steppe-desert to the east.

Evidence recovered from the excavations suggests that much of the surrounding countryside was forested and offered the inhabitants a wide variety of economic resources. Arable land is plentiful within the site's immediate environs. These variables are atypical of many major neolithic sites in the Near East, several of which are located in marginal environments. Yet despite its apparent richness, the area of 'Ain Ghazal is climatically and environmentally sensitive because of its proximity throughout the Holocene to the fluctuating steppe-forest border.

The Ain Ghazal settlement first appear in the MPPNB and is split into two MPPNB phases. Phase 1 starts 10300 yBP and ends 9950 yBP, phase 2 ends 9550 yBP.

The estimated population of the MPPNB site from ‘Ain Ghazal is of 259-1,349 individuals with an area of 3.01-4.7 ha. Is argued that at its founding at the commencement of the MPPNB ‘Ain Ghazal was likely 2 ha in size and grew to 5 ha by the end of the MPPNB. At this point in time their estimated population was 600-750 people or 125-150 people per hectare.

Peki'in Cave Israel

During the Chalcolithic Period (the “Copper Age,”) In the Northern Galilee town of Peki'in here's a burial cave that dates to over 6,500 years ago. The cave is the largest one known in Israel and contains a wealth of ancient artifacts: decorated ossuaries which some claim is the proto Israelite Burial, burial offerings, jars, stone tools. We find that the individuals buried in Peqi’in Cave represent a relatively genetically homogeneous population. This homogeneity is evident not only in the genome-wide analyses but also in the fact that most of the male individuals (nine out of ten) belong to the Y-DNA Haplogroup T a lineage thought to have diversified in the Near East. 2x T-L208 Peqi'in 1155,1160, 1x T-FT13419 Peqi'in 1165, 4x T-Y4119 Peqi'in ,1166,1170,1172,1178, 2x T-L454 Peqi'in 1180,1187 expressing the upstream and downstream diversity of Haplogroup T-M184 in West Asia its most likely point of divergence.

Kulubnarti Nubian Christian

Kulubnarti 6340 was a 18 month old baby boy who lived between 770 - 960 CE Kulubnarti 6328 was a 7 year old boy who lived between 700 - 990 CE during the North Africa Christian Age and was found in the region now known as the elite R cemetery in Kulubnarti, Sudan. They were associated with the Kulubnarti Nubians cultural group the Y-DNA was T-Y31479 and T-FT338883 they along with a Haplogroup LT were the three outliers amongst the Nubian elite R cemetery.

Notable members

Elite endurance runners

Possible patterns between Y-chromosome and elite endurance runners were studied in an attempt to find a genetic explanation to the Ethiopian endurance running success. Given the superiority of East African athletes in international distance running over the past four decades, it has been speculated that they are genetically advantaged. Elite marathon runners from Ethiopia were analysed for K*(xP) which according to the previously published Ethiopian studies is attributable to the haplogroup T [83]

According to further studies, [6] T1a1a* (L208) was found to be proportionately more frequent in the elite marathon runners sample than in the control samples than any other haplogroup, therefore this y-chromosome could play a significant role in determining Ethiopian endurance running success. Haplogroup T1a1a* was found in 14% of the elite marathon runners sample of whom 43% of this sample are from Arsi province. In addition, haplogroup T1a1a* was found in only 4% of the Ethiopian control sample and only 1% of the Arsi province control sample. T1a1a* is positively associated with aspects of endurance running, whereas E1b1b1 (old E3b1) is negatively associated. [84]

Royal House of Khalifa

The House of Khalifa (Arabic: آل خليفة, romanized: Āl Khalīfah) is the ruling family of the Kingdom of Bahrain. The Al Khalifas profess Sunni Islam and belong to the Anizah tribe, some members of this tribe joined the Utub alliance which migrated from Central Arabia to Kuwait, then ruled all of Qatar, more specifically Al Zubarah, which they built and ruled over before settling in Bahrain in the early 17th century. The current head of the family is Hamad bin Isa Al Khalifa, who became the Emir of Bahrain in 1999 and proclaimed himself King of Bahrain in 2002, in fact becoming a constitutional monarch

Thomas Jefferson

Thomas Jefferson

Phylogenetic network analysis of its Y-STR (short tandem repeat) haplotype shows that it is most closely related to an Egyptian K2 [now T/K1a] haplotype, but the presence of scattered and diverse European haplotypes within the network is nonetheless consistent with Jefferson's patrilineage belonging to an ancient and rare indigenous European type. This is supported by the observation that two of 85 unrelated British men sharing the surname Jefferson also share the President's Y-STR haplotype within haplogroup K2.

Turi E. King et al., [85]

A notable member of the T-M184 haplogroup is the third US President, Thomas Jefferson. He reportedly belongs to a subclade of T-M184 which is most commonly found in the Iberian Peninsula (e.g. Spain). His most distant known ancestor is Samuel Jeffreason[ sic ], born 11 October 1607 at Pettistree, Suffolk, England, although there is also a widespread belief that the President had Welsh ancestry.

There was controversy for almost two centuries regarding allegations that Thomas Jefferson had fathered the children of his slave Sally Hemings. An oral tradition in the Hemings family and other historical evidence was countered in the early 19th century by some Jefferson's grandchildren, who asserted that a son of Thomas Jefferson's sister, by the name of Carr, had been the father of Hemings' children. However, a 1998 study of Jefferson male-line DNA found that it matched that of a descendant of Sally Hemings' youngest son, Eston Hemings. Most historians now believe that Jefferson had a relationship with Hemings for 38 years, and probably fathered her six known children, four of whom lived to adulthood. In addition, the testing conclusively disproved any connection between the Hemings descendant and the Carr male line.

Subclades

Tree

Phylogenetic Tree of the Eurasian Haplogroup T-M184 and their closest macro-lineages
Latest 2015 tree ( ISOGG 2015 )
Branching of T-M184
LT
 L298 
  (43900ybp)  
LT*
 (xM184, M20) 


 All cases without M184 or M20

T
 M184 
  (39,300‑45,100ybp)  
T*
 (xL206) 


 All cases without L206 or PH110

 
T1
 L206 
  (26600ybp)  
T1*
 (xM70) 


 Syria

 
T1a
 M70 
  (19,000-30,000ybp) [6]   
T1a*
 (xL162,L131,Y11151) 


 All cases without L162, L131 or Y11151

 
T1a1
 L162 
  (15400ybp)  
T1a1*
 (xL208) 


 Pityusic Islanders, Pontic Greeks from Giresun, Germany and Balkars.

 
T1a1a
 L208 
  (14800ybp)  
T1a1a*
 (xCTS11451, Y16897) 


 All cases without CTS11451 or Y16897

 
T1a1a1
 CTS11451 
  (9500ybp)  
T1a1a1*
 (xY4119, Y6671) 


 All cases without Y4119 or Y6671

 
T1a1a1a
 Y4119 
  (9200ybp)  
T1a1a1a*
 (xCTS2214) 


 All cases without CTS2214

 
T1a1a1a1
 CTS2214 
  (8900ybp)  
 
T1a1a1a2
 Y6671 
  (8900ybp)  

 

 
T1a1a1b
 Y6671 
  (9200ybp)  

 

 
T1a1a2
 Y16897 
  (9500ybp)  

 

 
T1a2
 L131 
  (15400ybp)  

 

 
T1a3
 Y11151 
  (15400ybp)  

 

T2
PH110 
  (26600ybp)  


 
 Ossetian Irons, Leoneses, Germans and Bhutaneses

L
M20
L1
M22


 West Asia, Europe, Central and South Asia.

 
L2
L595


 
 Widely widespread in Europe, where is found the highest diversity of this lineage.

Macro-Haplogroup LT

Phylogenetic history

Prior to 2002, there were in academic literature at least seven naming systems for the Y-Chromosome Phylogenetic tree. This led to considerable confusion. In 2002, the major research groups came together and formed the Y-Chromosome Consortium (YCC). They published a joint paper that created a single new tree that all agreed to use. Later, a group of citizen scientists with an interest in population genetics and genetic genealogy formed a working group to create an amateur tree aiming at being above all timely. The table below brings together all of these works at the point of the landmark 2002 YCC Tree. This allows a researcher reviewing older published literature to quickly move between nomenclatures.

YCC 2002/2008 (Shorthand)(α)(β)(γ)(δ)(ε)(ζ)(η)YCC 2002 (Longhand)YCC 2005 (Longhand)YCC 2008 (Longhand)YCC 2010r (Longhand)ISOGG 2006ISOGG 2007ISOGG 2008ISOGG 2009ISOGG 2010ISOGG 2011ISOGG 2012ISOGG 2013
T-M18426VIII1U25Eu16H5FK*KTTK2K2TTTTTT
K-M70/T-M7026VIII1U25Eu15H5FK2K2TT1K2K2TTTT1T1aT1a
T-P7726VIII1U25Eu15H5FK2K2T2T1a2K2K2T2T2T2a1T1a1bT1a1a1T1a1a1

Original research publications

The following research teams per their publications were represented in the creation of the YCC Tree.

α Jobling and Tyler-Smith 2000 and Kaladjieva 2001

β Underhill 2000

γ Hammer 2001

δ Karafet 2001

ε Semino 2000

ζ Su 1999

η Capelli 2001

Y-DNA backbone tree

Related Research Articles

Y-chromosomal Aaron is the name given to the hypothesized most recent common ancestor of the patrilineal Jewish priestly caste known as Kohanim. According to the traditional understanding of the Hebrew Bible, this ancestor was Aaron, the brother of Moses.

<span class="mw-page-title-main">Haplogroup J (Y-DNA)</span> Human Y-chromosome DNA haplogroup

Haplogroup J-M304, also known as J, is a human Y-chromosome DNA haplogroup. It is believed to have evolved in Western Asia. The clade spread from there during the Neolithic, primarily into North Africa, the Horn of Africa, the Socotra Archipelago, the Caucasus, Europe, Anatolia, Central Asia, South Asia, and Southeast Asia.

<span class="mw-page-title-main">Haplogroup E-M215</span> Human Y-chromosome DNA haplogroup

E-M215 or E1b1b, formely known as E3b, is a major human Y-chromosome DNA haplogroup. E-M215 has two basal branches, E-M35 and E-M281. E-M35 is primarily distributed in North Africa and the Horn of Africa, and occurs at moderate frequencies in the Middle East, Europe, and Southern Africa. E-M281 occurs at a low frequency in Ethiopia.

Haplogroup K or K-M9 is a genetic lineage within human Y-chromosome DNA haplogroup. A sublineage of haplogroup IJK, K-M9, and its descendant clades represent a geographically widespread and diverse haplogroup. The lineages have long been found among males on every continent except Antarctica.

<span class="mw-page-title-main">Haplogroup Q-M242</span> Human Y chromosome DNA grouping common among Native Americans

Haplogroup Q or Q-M242 is a Y-chromosome DNA haplogroup. It has one primary subclade, Haplogroup Q1 (L232/S432), which includes numerous subclades that have been sampled and identified in males among modern populations.

<span class="mw-page-title-main">Haplogroup J-M267</span> Human Y-chromosome DNA haplogroup

Haplogroup J-M267, also commonly known as Haplogroup J1, is a subclade (branch) of Y-DNA haplogroup J-P209 along with its sibling clade haplogroup J-M172.

<span class="mw-page-title-main">Haplogroup T-M184</span> Human Y-chromosome DNA haplogroup

Haplogroup T-M184, also known as Haplogroup T, is a human Y-chromosome DNA haplogroup. The unique-event polymorphism that defines this clade is the single-nucleotide polymorphism known as M184.

A modal haplotype is an ancestral haplotype derived from the DNA test results of a specific group of people, using genetic genealogy.

Haplogroup E-V68, also known as E1b1b1a, is a major human Y-chromosome DNA haplogroup found in North Africa, the Horn of Africa, Western Asia and Europe. It is a subclade of the larger and older haplogroup, known as E1b1b or E-M215. The E1b1b1a lineage is identified by the presence of a single nucleotide polymorphism (SNP) mutation on the Y chromosome, which is known as V68. It is a subject of discussion and study in genetics as well as genetic genealogy, archaeology, and historical linguistics.

Y-DNA haplogroups in populations of Europe are haplogroups of the male Y-chromosome found in European populations.

Listed here are notable ethnic groups and populations from Western Asia, Egypt and South Caucasus by human Y-chromosome DNA haplogroups based on relevant studies. The samples are taken from individuals identified with the ethnic and linguistic designations in the first two columns, the third column gives the sample size studied, and the other columns give the percentage of the particular haplogroup. Some old studies conducted in the early 2000s regarded several haplogroups as one haplogroup, e.g. I, G and sometimes J were haplogroup 2, so conversion sometimes may lead to unsubstantial frequencies below.

E-Z827, also known as E1b1b1b, is a major human Y-chromosome DNA haplogroup. It is the parent lineage to the E-Z830 and E-V257 subclades, and defines their common phylogeny. The former is predominantly found in the Middle East; the latter is most frequently observed in North Africa, with its E-M81 subclade observed among the ancient Guanche natives of the Canary Islands. E-Z827 is also found at lower frequencies in Europe, and in isolated parts of Southeast Africa.

Genetic studies on Serbs show close affinity to other neighboring South Slavs.

Listed here are the human Y-chromosome DNA haplogroups found in various ethnic groups and populations from North Africa and the Sahel (Tuaregs).

The genetic history of Egypt reflects its geographical location at the crossroads of several major biocultural areas: North Africa, the Sahara, the Middle East, the Mediterranean and sub-Saharan Africa.

<span class="mw-page-title-main">Y Chromosome Haplotype Reference Database</span>

The Y Chromosome Haplotype Reference Database (YHRD) is an open-access, annotated collection of population samples typed for Y chromosomal sequence variants. Two important objectives are pursued: (1) the generation of reliable frequency estimates for Y-STR haplotypes and Y-SNP haplotypes to be used in the quantitative assessment of matches in forensic and kinship cases and (2) the characterization of male lineages to draw conclusions about the origins and history of human populations. The database is endorsed by the International Society for Forensic Genetics (ISFG). By May 2023 about 350,000 Y chromosomes typed for 9-29 STR loci have been directly submitted by worldwide forensic institutions and universities. In geographic terms, about 53% of the YHRD samples stem from Asia, 21% from Europe, 12% from North America, 10% from Latin America, 3% from Africa, 0.8% from Oceania/Australia and 0.2% from the Arctic. The 1.406 individual sampling projects are described in about 800 peer-reviewed publications

<span class="mw-page-title-main">Haplogroup R-M269</span> Gene group

Haplogroup R-M269 is the sub-clade of human Y-chromosome haplogroup R1b that is defined by the SNP marker M269. According to ISOGG 2020 it is phylogenetically classified as R1b1a1b. It underwent intensive research and was previously classified as R1b1a2, R1b1c, R1b1b2 and R1b1a1a2.

Haplogroup D-M55 (M64.1/Page44.1) also known as Haplogroup D1a2a is a Y-chromosome haplogroup. It is one of two branches of Haplogroup D1a. The other is D1a1, which is found with high frequency in Tibetans and other Tibeto-Burmese populations and geographical close groups. D is also distributed with low to medium frequency in Central Asia, East Asia, and Mainland Southeast Asia.

As with all modern European nations, a large degree of 'biological continuity' exists between Bosnians and Bosniaks and their ancient predecessors with Y chromosomal lineages testifying to predominantly Paleolithic European ancestry. Studies based on bi-allelic markers of the NRY have shown the three main ethnic groups of Bosnia and Herzegovina to share, in spite of some quantitative differences, a large fraction of the same ancient gene pool distinct for the region. Analysis of autosomal STRs have moreover revealed no significant difference between the population of Bosnia and Herzegovina and neighbouring populations.

<span class="mw-page-title-main">Haplogroup E-M2</span> Human Y-chromosome DNA haplogroup

Haplogroup E-M2, also known as E1b1a1-M2, is a human Y-chromosome DNA haplogroup. E-M2 is primarily distributed within Africa followed by West Asia. More specifically, E-M2 is the predominant subclade in West Africa, Central Africa, Southern Africa, and the region of the African Great Lakes; it also occurs at moderate frequencies in North Africa, and the Middle East. E-M2 has several subclades, but many of these subhaplogroups are included in either E-L485 or E-U175. E-M2 is especially common among indigenous Africans who speak Niger-Congo languages, and was spread to Southern Africa and East Africa through the Bantu expansion.

References

Original research

    Other works cited

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