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Evolutionary biology |
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Reptiles arose about 320 million years ago [1] during the Carboniferous period. Reptiles, in the traditional sense of the term, are defined as animals that have scales or scutes, lay land-based hard-shelled eggs, and possess ectothermic metabolisms. So defined, the group is paraphyletic, excluding endothermic animals like birds that are descended from early traditionally-defined reptiles. A definition in accordance with phylogenetic nomenclature, which rejects paraphyletic groups, includes birds while excluding mammals and their synapsid ancestors. So defined, Reptilia is identical to Sauropsida.
Though few reptiles today are apex predators, many examples of apex reptiles have existed in the past. Reptiles have an extremely diverse evolutionary history that has led to biological successes, such as dinosaurs, pterosaurs, plesiosaurs, mosasaurs, and ichthyosaurs.
The origin of the reptiles lies about 320–310 million years ago, in the swamps of the late Carboniferous period, when the first reptiles evolved from advanced labyrinthodonts. [2] The oldest known animal that may have been an amniote, a reptile rather than an amphibian, is Casineria [3] [4] (though it has also been argued to be a temnospondyl amphibian). [5]
A series of footprints from the fossil strata of Nova Scotia, dated to 315 million years, show typical reptilian toes and imprints of scales. [6] The tracks are attributed to Hylonomus , the oldest unquestionable reptile known. [7] It was a small, lizard-like animal, about 20 to 30 cm (8–12 in) long, with numerous sharp teeth indicating an insectivorous diet. [8]
Other examples include Westlothiana (sometimes considered a stem-amniote rather than a true amniote) [9] and Paleothyris , both of similar build and presumably similar habit. One of the best known early reptiles is Mesosaurus , a genus from the Early Permian that had returned to water, feeding on fish.
The earliest reptiles were largely overshadowed by bigger labyrinthodont amphibians, such as Cochleosaurus , and remained a small, inconspicuous part of the fauna until after the small ice age at the end of the Carboniferous.
It was traditionally assumed that first reptiles were anapsids, having a solid skull with holes only for the nose, eyes, spinal cord, etc.; [10] the discoveries of synapsid-like openings in the skull roof of the skulls of several members of Parareptilia, including lanthanosuchoids, millerettids, bolosaurids, some nycteroleterids, some procolophonoids and at least some mesosaurs [11] [12] [13] made it more ambiguous and it is currently uncertain whether the ancestral reptile had an anapsid-like or synapsid-like skull. [13] Very soon after the first reptiles appeared, they split into two branches. [14] One branch, Synapsida (including modern mammals), had one opening in the skull roof behind each eye. The other branch, Sauropsida, is itself divided into two main groups. One of them, the aforementioned Parareptilia, contained taxa with anapsid-like skull, as well as taxa with one opening behind each eye (see above). Members of the other group, Diapsida, possessed a hole in their skulls behind each eye, along with a second hole located higher on the skull. The function of the holes in both synapsids and diapsids was to lighten the skull and give room for the jaw muscles to move, allowing for a more powerful bite. [10]
Turtles have been traditionally believed to be surviving anapsids, on the basis of their skull structure. [15] The rationale for this classification was disputed, with some arguing that turtles are diapsids that reverted to this primitive state in order to improve their armor (see Parareptilia). [2] Later morphological phylogenetic studies with this in mind placed turtles firmly within Diapsida. [16] All molecular studies have strongly upheld the placement of turtles within diapsids, most commonly as a sister group to extant archosaurs. [17] [18] [19] [20]
Pelycosaurs |
A basic cladogram of the origin of mammals. Important developments in the transition from reptile to mammal were the evolution of warm-bloodedness, of molar occlusion, of the three-ossicle middle ear, of hair, and of mammary glands. By the end of the Triassic, there were many species that looked like modern mammals and, by the Middle Jurassic, the lineages leading to the three extant mammal groups — the monotremes, the marsupials, and the placentals — had diverged.
Near the end of the Carboniferous, while the terrestrial reptiliomorph labyrinthodonts were still present, the synapsids evolved the first fully terrestrial large vertebrates, the pelycosaurs such as Edaphosaurus . In the mid-Permian period, the climate turned drier, resulting in a change of fauna: The primitive pelycosaurs were replaced by the more advanced therapsids. [21]
The anapsid reptiles, whose massive skull roofs had no postorbital holes, continued and flourished throughout the Permian. The pareiasaurs reached giant proportions in the late Permian, eventually disappearing at the close of the period. [21]
Late in the period, the diapsid reptiles split into two main lineages, the archosaurs (ancestors of crocodiles and dinosaurs) and the lepidosaurs (predecessors of modern tuataras, lizards, and snakes). Both groups remained lizard-like and relatively small and inconspicuous during the Permian.
The close of the Permian saw the greatest mass extinction known (see the Permian–Triassic extinction event). Most of the earlier anapsid/synapsid megafauna disappeared, being replaced by the archosauromorph diapsids. The archosaurs were characterized by elongated hind legs and an erect pose, the early forms looking somewhat like long-legged crocodiles. The archosaurs became the dominant group during the Triassic period, developing into the well-known dinosaurs and pterosaurs, as well as the pseudosuchians. The Mesozoic is often called the "Age of Reptiles", a phrase coined by the early 19th-century paleontologist Gideon Mantell who recognized the dinosaurs and the ancestors of the crocodilians as the dominant land vertebrates. Some of the dinosaurs were the largest land animals ever to have lived while some of the smaller theropods gave rise to the first birds. [21]
The sister group to Archosauromorpha is Lepidosauromorpha, containing squamates and rhynchocephalians, as well as their fossil relatives. Lepidosauromorpha contained at least one major group of the Mesozoic sea reptiles: the mosasaurs, which emerged during the Cretaceous period. The phylogenetic placement of other main groups of fossil sea reptiles – the sauropterygians and the ichthyosaurs, which evolved in the early Triassic and in the Middle Triassic respectively – is more controversial. Different authors linked these groups either to lepidosauromorphs [22] or to archosauromorphs, [23] [24] [25] and ichthyosaurs were also argued to be diapsids that did not belong to the least inclusive clade containing lepidosauromorphs and archosauromorphs. [26]
The therapsids came under increasing pressure from the dinosaurs in the Jurassic; the mammals and the tritylodontids were the only survivors of the line by the end of the period.
The main points to the transition from reptile to bird are the evolution from scales to feathers, the evolution of the beak (although independently evolved in other organisms), the hollowfication of bones, development of flight, and warm-bloodedness.
The evolution of birds is thought to have begun in the Jurassic Period, with the earliest birds derived from theropod dinosaurs. Birds are categorized as a biological class, Aves. The earliest known species in Aves is Archaeopteryx lithographica , from the Late Jurassic period. Modern phylogenetics place birds in the dinosaur clade Theropoda. According to the current consensus, Aves and Crocodilia are the sole living members of an unranked clade, the Archosauria.
Coelurosaurs |
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Simplified cladogram from Senter (2007). [27]
The close of the Cretaceous period saw the demise of the Mesozoic era reptilian megafauna. Along with massive amount of volcanic activity at the time, the meteor impact that created the Cretaceous–Paleogene boundary is accepted as the main cause for this mass extinction event. Of the large marine reptiles, only sea turtles are left, and, of the dinosaurs, only the small feathered theropods survived in the form of birds. The end of the “Age of Reptiles” led to the “Age of Mammals”. Despite the change in phrasing, reptile diversification continued throughout the Cenozoic. Today, squamates make up the majority of extant reptiles today (over 90%). [28] There are approximately 9,766 extant species of reptiles, [28] compared with 5,400 species of mammals, so the number of reptilian species (without birds) is nearly twice the number of mammals.
After the Cretaceous–Paleogene extinction event wiped out all of the non-avian dinosaurs (birds are generally regarded as the surviving dinosaurs) and several mammalian groups, placental and marsupial mammals diversified into many new forms and ecological niches throughout the Paleogene and Neogene eras. Some reached enormous sizes and almost as wide a variation as the dinosaurs once did. Nevertheless, mammalian megafauna never quite reached the skyscraper heights of some sauropods.
Nonetheless, large reptiles still composed important megafaunal components, such as giant tortoises, [29] [30] large crocodilians and, more locally, large varanids.
Testudines, or turtles, may have evolved from anaspids, but their exact origin is unknown and heavily debated. Fossils date back to around 220 million years ago and share remarkably similar characteristics. These first turtles retain the same body plan as do all modern testudines and are mostly herbivorous, with some feeding exclusively on small marine organisms. The trade-mark shell is believed to have evolved from extensions from their backbone and widened ribs that fused together. This is supported by the fossil of Odontochelys semitestacea, which has an incomplete shell originating from the ribs and back bone. This species also had teeth with its beak, giving more support to it being a transitional fossil, although this claim is still controversial. This shell evolved to protect against predators, but also slows down the land-based species by a great amount. This has caused many species to go extinct in recent times. Because of alien species out-competing them for food and the inability to escape from humans, there are many endangered species in this order.
Sphenodontians arose in the mid Triassic and now consists of a single genus, tuatara, which comprises two endangered species that live on New Zealand and some of its minor surrounding islands. Their evolutionary history is filled with many species. [31] Recent paleogenetic discoveries show that tuataras are prone to quick speciation.
The most recent order of reptiles, squamates, [32] are recognized by having a movable quadrate bone (giving them upper-jaw movement), possessing horny scales and hemipenes. They originate from the early Jurassic and are made up of the three suborders Lacertilia (paraphyletic), Serpentes, and Amphisbaenia. Although they are the most recent order, squamates contain more species than any of the other reptilian orders. Squamates are a monophyletic group included, with the Sphenodontia (e.g. tuataras), in the Lepidosauria. The latter superorder, together with some extinct animals like the plesiosaurs, constitute the Lepidosauromorpha, the sister infraclass to the group, the Archosauromorpha, that contains crocodiles, turtles, and birds. Although squamate fossils first appear in the early Jurassic, mitochondrial phylogenetics suggests that they evolved in the late Permian. Most evolutionary relationships within the squamates are not yet completely worked out, with the relationship of snakes to other groups being most problematic. From morphological data, Iguanid lizards have been thought to have diverged from other squamates very early, but recent molecular phylogenies, both from mitochondrial and nuclear DNA, do not support this early divergence. [33] Because snakes have a faster molecular clock than other squamates, [33] and there are few early snake and snake ancestor fossils, [34] it is difficult to resolve the relationship between snakes and other squamate groups.
The first organisms that showed similar characteristics of Crocodilians [35] were the Crurotarsi, who appeared during the early Triassic 250 million years ago. This quickly gave rise to the Eusuchia clade 220 million years ago, which would eventually lead to the order of Crocodilians, the first of which arose about 85 million years ago during the late Cretaceous. The earliest fossil evidence of eusuchians is of the genus Isisfordia . Early species mainly fed on fish and vegetation. They were land-based, most having long legs (when compared to modern crocodiles) and many were bipedal. As diversification increased, many apex predators arose, all of which are now extinct. Modern Crocodilia arose through specific evolutionary traits. The complete loss of bipedalism was traded for a generally low quadrupedal stance for an easy and less noticeable entrance to bodies of water. The shape of the skull/jaw changed to allow more grasp along with upward-pointing nostrils and eyes. Mimicry is evident, as the backs of all crocodilia resemble some type of floating log and their general color scheme of brown and green mimics moss or wood. Their tail also took on a paddle shape to increase swimming speed. The only remaining groups [36] of this order are the alligators, caimans, crocodiles, gharials, and false gharials.
Reptiles, as commonly defined, are a group of tetrapods with usually an ectothermic ('cold-blooded') metabolism and amniotic development. Living reptiles comprise four orders: Testudines (turtles), Crocodilia (crocodilians), Squamata, and Rhynchocephalia. As of May 2023, about 12,000 living species of reptiles are listed in the Reptile Database. The study of the traditional reptile orders, customarily in combination with the study of modern amphibians, is called herpetology.
An anapsid is an amniote whose skull lacks one or more skull openings near the temples. Traditionally, the Anapsida are considered the most primitive subclass of amniotes, the ancestral stock from which Synapsida and Diapsida evolved, making anapsids paraphyletic. It is, however, doubtful that all anapsids lack temporal fenestra as a primitive trait, and that all the groups traditionally seen as anapsids truly lacked fenestra.
A tetrapod is any four-limbed vertebrate animal of the superclass Tetrapoda. Tetrapods include all extant and extinct amphibians and amniotes, with the latter in turn evolving into two major clades, the sauropsids and synapsids. Some tetrapods, such as snakes, legless lizards, and caecilians, have evolved to become limbless via mutations of the Hox gene. Nevertheless, these limbless groups still qualify as tetrapods through their ancestry, and some retain a pair of vestigial spurs that are remnants of the hindlimbs.
Synapsida is one of the two major clades of vertebrate animals in the group Amniota, the other being the Sauropsida. The synapsids were the dominant land animals in the late Paleozoic and early Mesozoic, but the only group that survived into the Cenozoic are mammals. Unlike other amniotes, synapsids have a single temporal fenestra, an opening low in the skull roof behind each eye orbit, leaving a bony arch beneath each; this accounts for their name. The distinctive temporal fenestra developed about 318 million years ago during the Late Carboniferous period, when synapsids and sauropsids diverged, but was subsequently merged with the orbit in early mammals.
Amniotes are tetrapod vertebrate animals belonging to the clade Amniota, a large group that comprises the vast majority of living terrestrial and semiaquatic vertebrates. Amniotes evolved from amphibian ancestors during the Carboniferous period and further diverged into two groups, namely the sauropsids and synapsids, an event that marks the appearance of Amniota, according to the definition established under the PhyloCode. This basal divergence within Amniota has been dated by molecular studies at 310–329 Ma or 312–330 Ma, but the presence of Hylonomus at Joggins implies a minimal age of about 317 Ma. A fossilized birth-death process study of early amniotes suggested an age of 322–340 Ma. Amniotes are distinguished from the other living tetrapod clade — the non-amniote lissamphibians — by the development of three extraembryonic membranes, thicker and keratinized skin, and costal respiration. Additional unique features are the presence of adrenocortical and chromaffin tissues as a discrete pair of glands near their kidneys, which are more complex, the presence of an astragalus for better extremity range of motion, the diminished role of skin breathing, and the complete loss of metamorphosis, gills, and lateral lines.
The Lepidosauria is a subclass or superorder of reptiles, containing the orders Squamata and Rhynchocephalia. Squamata includes lizards and snakes. Squamata contains over 9,000 species, making it by far the most species-rich and diverse order of non-avian reptiles in the present day. Rhynchocephalia was a formerly widespread and diverse group of reptiles in the Mesozoic Era. However, it is represented by only one living species: the tuatara, a superficially lizard-like reptile native to New Zealand.
Sauria is the clade of diapsids containing the most recent common ancestor of Archosauria and Lepidosauria, and all its descendants. Since most molecular phylogenies recover turtles as more closely related to archosaurs than to lepidosaurs as part of Archelosauria, Sauria can be considered the crown group of diapsids, or reptiles in general. Depending on the systematics, Sauria includes all modern reptiles or most of them as well as various extinct groups.
Diapsids are a clade of sauropsids, distinguished from more primitive eureptiles by the presence of two holes, known as temporal fenestrae, in each side of their skulls. The earliest traditionally identified diapsids, the araeoscelidians, appeared about three hundred million years ago during the late Carboniferous period. All diapsids other than the most primitive ones in the clade Araeoscelidia are often placed into the clade Neodiapsida. The diapsids are extremely diverse, and include birds and all modern reptile groups, including turtles, which were historically thought to lie outside the group. All modern reptiles and birds are placed within the neodiapsid subclade Sauria. Although some diapsids have lost either one hole (lizards), or both holes, or have a heavily restructured skull, they are still classified as diapsids based on their ancestry. At least 17,084 species of diapsid animals are extant: 9,159 birds, and 7,925 snakes, lizards, tuatara, turtles, and crocodiles.
Sauropsida is a clade of amniotes, broadly equivalent to the class Reptilia, though typically used in a broader sense to also include extinct stem-group relatives of modern reptiles and birds. The most popular definition states that Sauropsida is the sibling taxon to Synapsida, the other clade of amniotes which includes mammals as its only modern representatives. Although early synapsids have historically been referred to as "mammal-like reptiles", all synapsids are more closely related to mammals than to any modern reptile. Sauropsids, on the other hand, include all amniotes more closely related to modern reptiles than to mammals. This includes Aves (birds), which are recognized as a subgroup of archosaurian reptiles despite originally being named as a separate class in Linnaean taxonomy.
Archosauria or archosaurs is a clade of diapsid sauropsid tetrapods, with birds and crocodilians being the only extant representatives. Although broadly classified as reptiles, which traditionally exclude birds, the cladistic sense of the term includes all living and extinct relatives of birds and crocodilians such as non-avian dinosaurs, pterosaurs, phytosaurs, aetosaurs and rauisuchians as well as many Mesozoic marine reptiles. Modern paleontologists define Archosauria as a crown group that includes the most recent common ancestor of living birds and crocodilians, and all of its descendants.
The quadratojugal is a skull bone present in many vertebrates, including some living reptiles and amphibians.
Mesosaurs were a group of small aquatic reptiles that lived during the early Permian period (Cisuralian), roughly 299 to 270 million years ago. Mesosaurs were the first known aquatic reptiles, having apparently returned to an aquatic lifestyle from more terrestrial ancestors. It is uncertain which and how many terrestrial traits these ancestors displayed; recent research cannot establish with confidence if the first amniotes were fully terrestrial, or only amphibious. Most authors consider mesosaurs to have been aquatic, although adult animals may have been amphibious, rather than completely aquatic, as indicated by their moderate skeletal adaptations to a semiaquatic lifestyle. Similarly, their affinities are uncertain; they may have been among the most basal sauropsids or among the most basal parareptiles.
Archosauromorpha is a clade of diapsid reptiles containing all reptiles more closely related to archosaurs rather than Pantestudines. Archosauromorphs first appeared during the late Middle Permian or Late Permian, though they became much more common and diverse during the Triassic period.
Parareptilia ("near-reptiles") is an extinct subclass or clade of basal sauropsids/reptiles, typically considered the sister taxon to Eureptilia. Parareptiles first arose near the end of the Carboniferous period and achieved their highest diversity during the Permian period. Several ecological innovations were first accomplished by parareptiles among reptiles. These include the first reptiles to return to marine ecosystems (mesosaurs), the first bipedal reptiles, the first reptiles with advanced hearing systems, and the first large herbivorous reptiles. The only parareptiles to survive into the Triassic period were the procolophonoids, a group of small generalists, omnivores, and herbivores. The largest family of procolophonoids, the procolophonids, rediversified in the Triassic, but subsequently declined and became extinct by the end of the period.
Procolophonia is an extinct suborder (clade) of herbivorous reptiles that lived from the Middle Permian till the end of the Triassic period. They were originally included as a suborder of the Cotylosauria but are now considered a clade of Parareptilia. They are closely related to other generally lizard-like Permian reptiles such as the Millerettidae, Bolosauridae, Acleistorhinidae, and Lanthanosuchidae, all of which are included under the Anapsida or "Parareptiles".
Temporal fenestrae are openings in the temporal region of the skull of some amniotes, behind the orbit. These openings have historically been used to track the evolution and affinities of reptiles. Temporal fenestrae are commonly seen in the fossilized skulls of dinosaurs and other sauropsids. The major reptile group Diapsida, for example, is defined by the presence of two temporal fenestrae on each side of the skull. The infratemporal fenestra, also called the lateral temporal fenestra or lower temporal fenestra, is the lower of the two and is exposed primarily in lateral (side) view.
Eunotosaurus is an extinct genus of amniote, possibly a close relative of turtles. Eunotosaurus lived in the late Middle Permian and fossils can be found in the Karoo Supergroup of South Africa and Malawi. Eunotosaurus resided in the swamps of what is now southern Africa. Its ribs were wide and flat, forming broad plates similar to a primitive turtle shell, and the vertebrae were nearly identical to those of some turtles. Accordingly, it is often considered as a possible transitional fossil between turtles and their prehistoric ancestors. However, it is possible that these turtle-like features evolved independently of the same features in turtles, since other anatomical studies and phylogenetic analyses suggest that Eunotosaurus may instead have been a parareptile, an early-diverging neodiapsid unrelated to turtles, or a synapsid.
Owenetta is an extinct genus of owenettid procolophonian parareptile. Fossils have been found from the Beaufort Group in the Karoo Basin of South Africa. Although most procolophonians lived during the Triassic, Owenetta existed during the Wuchiapingian and Changhsingian stages of the Late Permian as well as the early Induan stage of the Early Triassic. It is the type genus of the family Owenettidae, and can be distinguished from other related taxa in that the posterior portion of the supratemporal bears a lateral notch and that the pineal foramen is surrounded by a depressed parietal surface on the skull table.
Pantestudines or Pan-Testudines is the proposed group of all reptiles more closely related to turtles than to any other living animal. It includes both modern turtles and all of their extinct relatives. Pantestudines with a complete shell are placed in the clade Testudinata.
Pappochelys is an extinct genus of diapsid reptile possibly related to turtles. The genus contains only one species, Pappochelys rosinae, from the Middle Triassic of Germany, which was named by paleontologists Rainer Schoch and Hans-Dieter Sues in 2015. The discovery of Pappochelys provides strong support for the placement of turtles within Diapsida, a hypothesis that has long been suggested by molecular data, but never previously by the fossil record. It is morphologically intermediate between the definite stem-turtle Odontochelys from the Late Triassic of China and Eunotosaurus, a reptile from the Middle Permian of South Africa.