Roseburia

Roseburia
Scientific classification
Domain:	Bacteria
Phylum:	Bacillota
Class:	Clostridia
Order:	Lachnospirales
Family:	Lachnospiraceae
Genus:	Roseburia Stanton & Savage 1983
Type species
Roseburia cecicola [1] Stanton & Savage 1983
Species
See text

Roseburia is a genus of butyrate-producing, Gram-positive anaerobic bacteria that inhabit the human colon. Named in honor of Theodor Rosebury, they are members of the phylum Bacillota (formerly known as Firmicutes). ^{[2] [3]}

Increased abundance of Roseburia is associated with weight loss and reduced glucose intolerance in mice. ^[4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) ^[1] and National Center for Biotechnology Information (NCBI) ^[5]

16S rRNA based LTP_10_2024 [6] [7] [8]

120 marker proteins based GTDB 09-RS220 [9] [10] [11]

Roseburia Roseburia R. amylophilaHitch et al. 2022 R. difficilisLiu et al. 2022 species‑group 2 Falcatimonas Eubacterium oxidoreducens Roseburia zhaniiLiu et al. 2022 Lachnobacterium Pararoseburia Pseudobutyrivibrio Agathobacter Roseburia "R. porci" Wylensek et al. 2020 R. inulinivorans Duncan et al. 2006 R. faecis Duncan et al. 2006 R. intestinalis Duncan et al. 2002 R. cecicolaStanton & Savage 1983 R. hominis Duncan et al. 2006

Roseburia R. amylophila "R. yibonii" Liu et al. 2021 species‑group 2 Roseburia zhanii Roseburia R. inulinivorans R. hominis R. intestinalis "R. rectibacter" Liu et al. 2021 "Roseburia porci" Lachnobacterium Agathobacter

See also

• List of bacterial orders
• List of bacteria genera

References

1. A.C. Parte; et al. "Roseburia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
2. Scott, K. P.; Martin, J. C.; Mrazek, J.; Flint, H. J. (2 May 2008). "Transfer of Conjugative Elements from Rumen and Human Firmicutes Bacteria to Roseburia inulinivorans". Applied and Environmental Microbiology. 74 (12): 3915–3917. Bibcode:2008ApEnM..74.3915S. doi:10.1128/AEM.02807-07. PMC   2446557 . PMID   18456856.
3. Machiels, K; Joossens, M; Sabino, J; De Preter, V; Arijs, I; Eeckhaut, V; Ballet, V; Claes, K; Van Immerseel, F; Verbeke, K; Ferrante, M; Verhaegen, J; Rutgeerts, P; Vermeire, S (August 2014). "A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis". Gut. 63 (8): 1275–83. doi:10.1136/gutjnl-2013-304833. PMID   24021287. S2CID   32963595.
4. Ryan, KK; Tremaroli, V; Clemmensen, C; Kovatcheva-Datchary, P; Myronovych, A; Karns, R; Wilson-Pérez, HE; Sandoval, DA; Kohli, R; Bäckhed, F; Seeley, RJ (2014). "FXR is a molecular target for the effects of vertical sleeve gastrectomy". Nature. 509 (7499): 183–8. Bibcode:2014Natur.509..183R. doi:10.1038/nature13135. PMC   4016120 . PMID   24670636.
5. Sayers; et al. "Roseburia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
6. "The LTP" . Retrieved 10 December 2024.
7. "LTP_all tree in newick format" . Retrieved 10 December 2024.
8. "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
9. "GTDB release 09-RS220". Genome Taxonomy Database . Retrieved 10 May 2024.
10. "bac120_r220.sp_labels". Genome Taxonomy Database . Retrieved 10 May 2024.
11. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2024.