Tipravirus | |
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Roniviridae virion | |
Yellow head virus genome | |
Virus classification | |
(unranked): | Virus |
Realm: | Riboviria |
Kingdom: | Orthornavirae |
Phylum: | Pisuviricota |
Class: | Pisoniviricetes |
Order: | Nidovirales |
Family: | Roniviridae |
Genus: | Okavirus |
Subgenus: | Tipravirus |
Okavirus is a genus of enveloped positive-strand RNA viruses which infect crustaceans. [1] Host organisms are mostly shrimp. It is the only genus in the family Roniviridae. [2] Viruses associated with the genus include: gill-associated virus (GAV) which causes reddening, biofouling with exoparasites, emaciation, and massive mortality; and yellow head virus (YHV) which causes yellow head, arrest of feeding, and massive mortality. [1] [3] The name is derived from the 'Oka' or lymphoid organ in which the viruses are commonly detected and in which pathology occurs during acute infections. Lymphoid organs are anatomical structures common to penaeid shrimp. There are three species in this genus. [1]
Viruses in the genus Okavirus are enveloped, with bacilliform geometries, and helical symmetry. The diameter is around 20–30 nm. [1] [3]
Genomes are linear and non-segmented, around 26 kb in length. [1] [3]
Entry into the host cell is achieved by attachment to host receptors, which mediates endocytosis. Replication follows the positive stranded RNA virus replication model. Positive stranded RNA virus transcription is the method of transcription. Crustaceans and mostly prawns serve as the natural host. Transmission routes are ingestion. [1] [3]
The genus contains one subgenus with three species: [4]
Flaviviridae is a family of enveloped positive-strand RNA viruses which mainly infect mammals and birds. They are primarily spread through arthropod vectors. The family gets its name from the yellow fever virus; flavus is Latin for "yellow", and yellow fever in turn was named because of its propensity to cause jaundice in victims. There are 89 species in the family divided among four genera. Diseases associated with the group include: hepatitis (hepaciviruses), hemorrhagic syndromes, fatal mucosal disease (pestiviruses), hemorrhagic fever, encephalitis, and the birth defect microcephaly (flaviviruses).
Barnaviridae is a family of non-enveloped, positive-strand RNA viruses. Cultivated mushrooms serve as natural hosts. The family has one genus, Barnavirus, which contains one species: Mushroom bacilliform virus. Diseases associated with this family includes La France disease.
Closteroviridae is a family of viruses. Plants serve as natural hosts. There are four genera and 59 species in this family, seven of which are unassigned to a genus. Diseases associated with this family include: yellowing and necrosis, particularly affecting the phloem.
Nodaviridae is a family of nonenveloped positive-strand RNA viruses. Vertebrates and invertebrates serve as natural hosts. Diseases associated with this family include: viral encephalopathy and retinopathy in fish. There are nine species in the family, assigned to two genera.
Sequivirus is a genus of viruses in the order Picornavirales, in the family Secoviridae. Plants serve as natural hosts. There are three species in this genus. Diseases associated with this genus include: PYFV: vein-yellowing, yellow flecks and yellow/green mosaic symptoms in parsnip, and ‘yellow net', followed by yellow spots and leaf distortion in celery.
Furovirus is a genus of viruses, in the family Virgaviridae. Graminae, winter wheat, wheat, triticale, oat, sorghum bicolor, and plants serve as natural hosts. There are six species in this genus. Diseases associated with this genus include: (SBWMV): green and yellow mosaic.
Closterovirus, also known as beet yellows viral group, is a genus of viruses, in the family Closteroviridae. Plants serve as natural hosts. There are 17 species in this genus. Diseases associated with this genus include: yellowing and necrosis, particularly affecting the phloem. This genus has a probably worldwide distribution and includes among other viral species the Beet yellows virus and Citrus tristeza virus, rather economically important plant diseases. At least some species require vectors such as aphids or mealybugs for their transmission from plant to plant.
Alphachrysovirus is a genus of double-stranded RNA viruses. It is one of two genera in the family Chrysoviridae. They infect fungi, in particular Penicillium. Their name is derived from the Greek word chrysos which means yellow-green. There are 20 species in this genus.
Benyvirus is a genus of viruses, in the family Benyviridae. Plant serve as natural hosts. There are four species in this genus. Diseases associated with this genus include: BNYVV: rhizomania.
Ourmiavirus is a genus of positive-strand RNA viruses. Cucurbits, cherry, and cassava serve as natural hosts. There are three species in this genus. Diseases associated with this genus include: OuMV: yellowing and chlorotic spot symptoms.
Pecluvirus is a genus of viruses, in the family Virgaviridae. Cereal crops and graminaceous weeds serve as natural hosts. There are two species in this genus. Diseases associated with this genus include: (SBWMV): green and yellow mosaic. The name of the genus is derived from Peanut clump virus: Peanut clump virus, giving rise to Pecluvirus.
Tobravirus is a genus of viruses, in the family Virgaviridae. Plants serve as natural hosts. There are three species in this genus. Diseases associated with this genus include: SBWMV: green and yellow mosaic.
Alphaflexiviridae is a family of viruses in the order Tymovirales. Plants and fungi serve as natural hosts. There are 65 species in this family, assigned to six genera. Diseases associated with this family include: mosaic and ringspot symptoms.
Cripavirus is a genus of viruses in the order Picornavirales, in the family Dicistroviridae. Invertebrates serve as natural hosts. There are four species in this genus. Diseases associated with this genus include: DCV: increased reproductive potential; extremely pathogenic when injected with high associated mortality; CrPV: paralysis and death. These viruses can produce proteins directly from their RNA genome upon entering a cell; and therefore, does not require an RNA polymerase packaged in with it, as this may be produced from the genome after entering the cell. The name of the cripavirus family originates from its most famous member the Cricket Paralysis Virus. Which was made famous by its rather unusual IRES : the Cripavirus IRES. The Cripavirus IRES is an RNA element that allows the virus to bind the ribosome and translate without a need for any initiation factors – as initiation is the most regulated step of translation this allows the virus to avoid many mechanisms to inhibit viral activity.
Bymovirus is a genus of viruses, in the family Potyviridae. Plants serve as natural hosts. There are six species in this genus.
Mandarivirus is a subgenus of viruses in the order Tymovirales, family Alphaflexiviridae, genus Potexvirus. There are three species in this subgenus. Diseases associated with this subgenus commonly include yellow ringspot and rapid decline of the tree.
Waikavirus is a genus of viruses in the order Picornavirales, in the family Secoviridae. Plants, poaceae, cyperaceae, and gramineae serve as natural hosts. There are four species in this genus. Diseases associated with this genus include: MCDV: plant stunting and chlorotic striping of tertiary leaf veins in maize.
Megabirnaviridae is a family of double-stranded RNA viruses with one genus Megabirnavirus which infects fungi. The group name derives from member's bipartite dsRNA genome and mega that is greater genome size than families Birnaviridae and Picobirnaviridae. There is only one species in this family: Rosellinia necatrix megabirnavirus 1. Diseases associated with this family include: reduced host virulence.
Permutotetraviridae is a family of viruses. Lepidopteran insects serve as natural hosts. The family contains one genus that has two species. Diseases associated with this family include: infection outcome varies from unapparent to lethal.
Nebovirus is a genus of viruses, in the family Caliciviridae. Bovine serve as natural hosts. There is only one species in this genus: Newbury 1 virus. Diseases associated with this genus include: Gastroenteritis.