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Legionella is a genus of pathogenic Gram-negative bacteria that includes the species L. pneumophila, causing legionellosis including a pneumonia-type illness called Legionnaires' disease and a mild flu-like illness called Pontiac fever.
Chlamydia pneumoniae is a species of Chlamydia, an obligate intracellular bacterium that infects humans and is a major cause of pneumonia. It was known as the Taiwan acute respiratory agent (TWAR) from the names of the two original isolates – Taiwan (TW-183) and an acute respiratory isolate designated AR-39. Briefly, it was known as Chlamydophila pneumoniae, and that name is used as an alternate in some sources. In some cases, to avoid confusion, both names are given.
An opportunistic infection is an infection caused by pathogens that take advantage of an opportunity not normally available. These opportunities can stem from a variety of sources, such as a weakened immune system, an altered microbiome, or breached integumentary barriers. Many of these pathogens do not cause disease in a healthy host that has a non-compromised immune system, and can, in some cases, act as commensals until the balance of the immune system is disrupted. Opportunistic infections can also be attributed to pathogens that cause mild illness in healthy individuals but lead to more serious illness when given the opportunity to take advantage of an immunocompromised host.
Streptococcus bovis is a species of Gram-positive bacteria that in humans is associated with urinary tract infections, endocarditis, sepsis, and colorectal cancer. S. gallolyticus is commonly found in the alimentary tract of cattle, sheep, and other ruminants, and may cause ruminal acidosis or feedlot bloat. It is also associated with spontaneous bacterial peritonitis, a frequent complication occurring in patients affected by cirrhosis. Equivalence with Streptococcus equinus has been contested.
Enterobacter cloacae is a clinically significant Gram-negative, facultatively-anaerobic, rod-shaped bacterium.
Legionella micdadei is a Gram-negative bacterium from the genus Legionella, which stains acid-fast. It stains weakly, but loses this trait upon being grown in culture. Tatlockia micdadei is an alternative term for L. micdadei, the Pittsburgh pneumonia agent and TATLOCK strain. It is named after Joseph E. McDade, who first isolated L. pneumophila.
Azospirillum brasilense is a well studied, nitrogen-fixing (diazotroph), genetically tractable, Gram-negative, alpha-proteobacterium bacterium, first described in Brazil by the group of Johanna Döbereiner and then receiving the name "brasilense". A. brasilense is able to fix nitrogen in the presence of low oxygen levels, making it a microaerobic diazotroph. An isolate from the genus Azospirillum was isolated from nitrogen poor soils in the Netherlands in 1925, however the species A. brasilense was first described in 1978 in Brazil, since this genus is widely found in the rhizospheres of grasses around the world where it confers plant growth promotion. Whether growth promotion occurs through direct nitrogen flux from the bacteria to the plant or through hormone regulation is debated. The two most commonly studied strains are Sp7 and Sp245, both are Brazilian isolates isolated from Tropical grasses from Seropedica, Brazil.
Afipia felis is the type species of the Afipia bacterial genus. It was formerly thought to cause cat-scratch disease. It is a Gram-negative, oxidase-positive, nonfermentative rod in the alpha-2 subgroup of the class Proteobacteria. It is motile by means of a single flagellum. It is noted for having the longest authority citation of any accepted species.
Legionella cherrii is an aerobic, flagellated, Gram-negative bacterium from the genus Legionella. It was isolated from a heated water sample in Minnesota. L. cherrii is similar to another Legionella species, L. pneumophila, and is believed to cause major respiratory problems.
Legionella jordanis is a Gram-negative bacterium from the genus Legionella which was isolated from the Jordan River in Bloomington, Indiana and from the sewage in DeKalb County, Georgia. L. jordanis is a rare human pathogen and can cause respiratory tract infections.
Legionella nagasakiensis is a Gram-negative bacterium from the genus Legionella which was isolated from a sample of hot spring water in Aomori in Japan and from human lung tissue. It is catalase-positive and rod-shaped, with a single polar flagellum.
Legionnaires' disease is a form of atypical pneumonia caused by any species of Legionella bacteria, quite often Legionella pneumophila. Signs and symptoms include cough, shortness of breath, high fever, muscle pains, and headaches. Nausea, vomiting, and diarrhea may also occur. This often begins 2–10 days after exposure.
Citrobacter youngae is a Gram-negative species of bacteria.
Citrobacter sedlakii is a species of Gram-negative bacteria. It has been described as causing human disease, but is generally found as a non-pathogenic organism in human stools.
Citrobacter rodentium is a Gram-negative species of bacteria. It infects the intestinal tracts of rodents, and infrequently is an opportunistic pathogen in humans.
Escherichia hermannii is a Gram-negative, rod-shaped species of bacterium. Strains of this species were originally isolated from human wounds, sputum, and stool. The species is named for American microbiologists George J. Hermann and Lloyd G. Herman.
Roseomonas is a genus of Gram negative bacteria. The cells are coccoid rods when viewed microscopically. Certain species are known to be opportunistic infections for humans.
Phytobacter is a genus of Gram-negative bacteria emerging from the grouping of isolates previously assigned to various genera of the family Enterobacteriaceae. This genus was first established on the basis of nitrogen fixing isolates from wild rice in China, but also includes a number of isolates obtained during a 2013 multi-state sepsis outbreak in Brazil and, retrospectively, several clinical strains isolated in the 1970s in the United States that are still available in culture collections, which originally were grouped into Brenner's biotype XII. Standard biochemical evaluation panels are lacking Phytobacter spp. from their database, thus often leading to misidentifications with other Enterobacterales species, especially Pantoea agglomerans. Clinical isolates of the species have been identified as an important source of extended-spectrum β-lactamase and carbapenem-resistance genes, which are usually mediated by genetic mobile elements. Strong protection of co-infecting sensitive bacteria has also been reported. Bacteria belonging to this genus are not pigmented, chemoorganotrophic and able to fix nitrogen. They are lactose fermenting, cytochrome-oxidase negative and catalase positive. Glucose is fermented with the production of gas. Colonies growing on MacConkey agar (MAC) are circular, convex and smooth with non-entire margins and an usually elevated center. Three species are currently validly included in the genus Phytobacter, which is still included within the Kosakonia clade in the lately reviewed family of Enterobacteriaceae. The incorporation of a fourth species, Phytobacter massiliensis, has recently been proposed via the unification of the genera Metakosakonia and Phytobacter.
Pluralibacter is a genus of Gram negative bacteria from the family of Enterobacteriaceae. The genus consists of two species, P. gergoviae and P. pyrinus. Both species were originally classified in the genus Enterobacter, but were reclassified into the novel genus Pluralibacter in 2013.
Pluralibacter pyrinus is a Gram-negative, motile, facultatively-anaerobic, rod-shaped bacterium. P. pyrinus is the causitive agent of brown leaf spot disease of pear trees.
References
- ↑ Brenner, Don J.; Steigerwalt, Arnold G.; Gorman, G. W.; Weaver, Robert E.; Feeley, James C.; Cordes, L. G.; Wilkinson, Hazel W.; Patton, Charlotte; Thomason, Berenice M.; Sasseville, Karen R. Lewallen (1980). "Legionella bozemanii sp. nov. andLegionella dumoffii sp. nov.: Classification of two additional species ofLegionella associated with human pneumonia". Current Microbiology. 4 (2): 111–116. doi:10.1007/BF02602903. ISSN 0343-8651.
