APG III system

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The APG III system of flowering plant classification is the third version of a modern, mostly molecular-based, system of plant taxonomy being developed by the Angiosperm Phylogeny Group (APG). Published in 2009, it was superseded in 2016 by a further revision, the APG IV system. [1] [2] [3]

Contents

Along with the publication outlining the new system, there were two accompanying publications in the same issue of the Botanical Journal of the Linnean Society:

Organization

The APG III system recognized all of the 45 orders of the previous system, as well as 14 new ones. The order Ceratophyllales was erroneously marked as a new order, as it had been recognized in both of the previous APG systems. The newly recognized orders were:

Amborellales, Nymphaeales, Chloranthales, Petrosaviales, Trochodendrales, Buxales, Vitales, Zygophyllales, Picramniales, Huerteales, Berberidopsidales, Escalloniales, Bruniales, and Paracryphiales.

The designation of alternative "bracketed families" was abandoned in APG III, because its inclusion in the previous system had been unpopular. APG III recognized 413 families, 43 fewer than in the previous system. Forty-four of the 55 "bracketed families" were discontinued, and 20 other families were discontinued as well.

The discontinued bracketed families were:

Illiciaceae, Alliaceae, Agapanthaceae, Agavaceae, Aphyllanthaceae, Hesperocallidaceae, Hyacinthaceae, Laxmanniaceae, Ruscaceae, Themidaceae, Asphodelaceae, Hemerocallidaceae, Kingdoniaceae, Fumariaceae, Pteridophyllaceae, Didymelaceae, Tetracentraceae, Pterostemonaceae, Hypseocharitaceae, Francoaceae, Memecylaceae, Lepuropetalaceae, Rhoipteleaceae, Medusagynaceae, Quiinaceae, Malesherbiaceae, Turneraceae, Bretschneideraceae, Diegodendraceae, Cochlospermaceae, Peganaceae, Tetradiclidaceae, Nyssaceae, Ternstroemiaceae, Pellicieraceae, Aucubaceae, Donatiaceae, Lobeliaceae, Desfontainiaceae, Diervillaceae, Dipsacaceae, Linnaeaceae, Morinaceae, and Valerianaceae.

The other discontinued families were:

Limnocharitaceae, Luzuriagaceae, Sparganiaceae, Ixerbaceae, Ledocarpaceae, Heteropyxidaceae, Psiloxylaceae, Oliniaceae, Rhynchocalycaceae, Parnassiaceae, Maesaceae, Myrsinaceae, Theophrastaceae, Eremosynaceae, Polyosmaceae, Tribelaceae, Sphenostemonaceae, Aralidiaceae, Mackinlayaceae, and Melanophyllaceae.

21 families were accepted in the APG III system which had not been in the previous system, and a few families were moved to a different position. The newly recognized families are:

Cynomoriaceae, Haptanthaceae, Petermanniaceae, Schoepfiaceae, Limeaceae, Lophiocarpaceae, Montiaceae, Talinaceae, Anacampserotaceae, Centroplacaceae, Calophyllaceae, Guamatelaceae, Gerrardinaceae, Dipentodontaceae, Capparidaceae, Cleomaceae, Cytinaceae, Mitrastemonaceae, Metteniusaceae, Linderniaceae, and Thomandersiaceae.

The number of families not placed in any order was reduced from 39 to 10. Apodanthaceae and Cynomoriaceae were placed among the angiosperms, incertae sedis, that is, not in any group within the angiosperms. Eight other families were placed incertae sedis in various supra-ordinal groups within the angiosperms. The families not placed in any order were:

Apodanthaceae, Cynomoriaceae, Dasypogonaceae, Sabiaceae, Dilleniaceae, Icacinaceae, Metteniusaceae, Oncothecaceae, Vahliaceae, and Boraginaceae.

The paragraph below shows the number of families in each order and the placement of those families that were not included in any order. These figures were produced by simply counting the families in the text of the paper that established APG III. [1]

ORDERS: Amborellales (1), Nymphaeales (3), Austrobaileyales (3), Chloranthales (1), Canellales (2), Piperales (5), Magnoliales (6), Laurales (7), Acorales (1), Alismatales (13), Petrosaviales (1), Dioscoreales (3), Pandanales (5), Liliales (10), Asparagales (14), Arecales (1), Poales (16), Commelinales (5), Zingiberales (8), Ceratophyllales (1), Ranunculales (7), Proteales (3), Trochodendrales (1), Buxales (2), Gunnerales (2), Saxifragales (14), Vitales (1), Zygophyllales (2), Celastrales (2), Oxalidales (7), Malpighiales (35), Fabales (4), Rosales (9), Fagales (7), Cucurbitales (7), Geraniales (3), Myrtales (9), Crossosomatales (7), Picramniales (1), Sapindales (9), Huerteales (3), Brassicales (17), Malvales (10), Berberidopsidales (2), Santalales (7), Caryophyllales (34), Cornales (6), Ericales (22), Garryales (2), Gentianales (5), Solanales (5), Lamiales (23), Aquifoliales (5), Asterales (11), Escalloniales (1), Bruniales (2), Apiales (7), Paracryphiales (1), Dipsacales (2).

SUPRA-ORDINAL GROUPS: commelinids (1), basal eudicots (1), Pentapetalae (1), lamiids incertae sedis (3), core lamiids (2), angiosperms incertae sedis (2).

The circumscription of the family Icacinaceae remains especially doubtful. Apodytes and its close relative, Rhaphiostylis, as well as Emmotum , Cassinopsis , and a few other genera were provisionally retained within it until further studies can determine whether they properly belong there.

Three genera ( Gumillea , Nicobariodendron , and Petenaea ) were placed within the angiosperms incertae sedis. Gumillea had been unplaced in APG II. Nicobariodendron and Petenaea were newly added to the list. The latter was later placed into its own family Petenaeaceae in the order Huerteales [6] [7]

The classification is shown below in two versions. The short version goes to the level of orders and of families unplaced in an order. The detailed version shows all the families. Orders at the same level in the classification are arranged alphabetically. Note that orders may not contain the same families as in earlier versions of the APG system (APG system, APG II system). Further detail on relationships can be seen in the phylogenetic tree below.

Short version

Detailed version

Legend:

* = new family placement;
= newly recognized order for the APG system;
§ = new family circumscription described in the text;
$ = families that represent the broader circumscription of options available in APG II and favoured here;
$$ = families that were in square brackets in APG II, the narrower circumscriptions favoured here.

Angiosperms

Magnoliids

Monocots

Commelinids

Probable sister of eudicots

Eudicots

Core eudicots

Rosids

Fabids (eurosids I)

malvids (eurosids II)

Asterids

lamiids (euasterids I)

campanulids (euasterids II)

Taxa of uncertain position

Phylogeny

The APG III system was based on a phylogenetic tree for the angiosperms which included all of the 59 orders and 4 of the unplaced families. The systematic positions of the other 6 unplaced families was so uncertain that they could not be placed in any of the polytomies in the tree. They are shown in the classification table entitled "Detailed version" above, 4 in Euasterids I and 2 in Taxa of uncertain position.

The phylogenetic tree shown below was published with the APG III system, [1] but without some of the labels that are added here.

angiosperms

Amborellales

Nymphaeales

Austrobaileyales

Subfamilies replacing discontinued families

A number of subfamilies have been proposed to replace some of the families which were optional (i.e. bracketed) in APG II, but have been discontinued in APG III. [8] These are shown in the table below.

Subfamilies replacing APG II bracketed families
APG II bracketed familyAPG III family: subfamily
AgapanthaceaeAmaryllidaceae: Agapanthoideae
AgavaceaeAsparagaceae: Agavoideae
AlliaceaeAmaryllidaceae: Allioideae
AmaryllidaceaeAmaryllidaceae: Amaryllidoideae
AphyllanthaceaeAsparagaceae: Aphyllanthoideae
AsparagaceaeAsparagaceae: Asparagoideae
AsphodelaceaeXanthorrhoeaceae: Asphodeloideae
HemerocallidaceaeXanthorrhoeaceae: Hemerocallidoideae
HesperocallidaceaeAsparagaceae: Agavoideae
HyacinthaceaeAsparagaceae: Scilloideae
LaxmanniaceaeAsparagaceae: Lomandroideae
RuscaceaeAsparagaceae: Nolinoideae
ThemidaceaeAsparagaceae: Brodiaeoideae
XanthorrhoeaceaeXanthorrhoeaceae: Xanthorrhoeoideae

Related Research Articles

<span class="mw-page-title-main">Myrtales</span> Order of flowering plants

The Myrtales are an order of flowering plants (angiosperms) placed as a sister to the eurosids II clade as of the publishing of the Eucalyptus grandis genome in June 2014.

<span class="mw-page-title-main">Santalales</span> Order of flowering plants

The Santalales are an order of flowering plants with a cosmopolitan distribution, but heavily concentrated in tropical and subtropical regions. It derives its name from its type genus Santalum (sandalwood). Mistletoe is the common name for a number of parasitic plants within the order.

<span class="mw-page-title-main">Nepenthales</span> Order of carnivorous plants

Nepenthales is an order of carnivorous flowering plants in the Cronquist system of plant classification.

<span class="mw-page-title-main">Geraniales</span> Order of flowering plants in the rosid subclade of eudicots

Geraniales is a small order of flowering plants, included within the rosid subclade of eudicots. The largest family in the order is Geraniaceae with over 800 species. In addition, the order includes the smaller Francoaceae with about 40 species. Most Geraniales are herbaceous, but there are also shrubs and small trees.

<span class="mw-page-title-main">Plumbaginaceae</span> Family of flowering plants

Plumbaginaceae is a family of flowering plants, with a cosmopolitan distribution. The family is sometimes referred to as the leadwort family or the plumbago family.

<span class="mw-page-title-main">Haemodoraceae</span> Family of flowering plants

Haemodoraceae is a family of perennial herbaceous angiosperms containing 15 genera and 102 known species, sometimes known as the "bloodroots", found throughout the Southern Hemisphere, from Australia and New Guinea to South Africa, as well as the Americas.

<span class="mw-page-title-main">Lomandroideae</span> Subfamily of flowering plants

Lomandroideae is a subfamily of monocot flowering plants in the family Asparagaceae, order Asparagales, according to the APG III system of 2009. The subfamily name is derived from the generic name of the type genus, Lomandra. The group has previously been treated as a separate family Laxmanniaceae. In the Kubitzki system, it is treated as Lomandraceae Lotsy.

<span class="mw-page-title-main">Boraginales</span> Order of flowering plants within the lammiid clade of eudicots

Boraginales is an order of flowering plants in the asterid clade, with a total of about 125 genera and 2,700 species. Different taxonomic treatments either include only a single family, the Boraginaceae, or divide it into up to eleven families. Its herbs, shrubs, trees and lianas (vines) have a worldwide distribution.

<span class="mw-page-title-main">Staphyleaceae</span> Family of flowering plants

Staphyleaceae is a small family of flowering plants in the order Crossosomatales, native to Europe, temperate and tropical Asia and the Americas. The largest genus Staphylea, which gives the family its name, contains the "bladdernut" trees. The family includes three genera with more than 40 known species.

<span class="mw-page-title-main">Huerteales</span> Order of flowering plants

Huerteales is the botanical name for an order of flowering plants. It is one of the 17 orders that make up the large eudicot group known as the rosids in the APG III system of plant classification. Within the rosids, it is one of the orders in Malvidae, a group formerly known as eurosids II and now known informally as the malvids. This is true whether Malvidae is circumscribed broadly to include eight orders as in APG III, or more narrowly to include only four orders. Huerteales consists of four small families, Petenaeaceae, Gerrardinaceae, Tapisciaceae, and Dipentodontaceae.

<span class="mw-page-title-main">Escalloniaceae</span> Family of flowering plants

Escalloniaceae is a family of flowering plants consisting of about 130 species in eight genera. In the APG II system it is one of eight families in the euasterids II clade (campanulids) that are unplaced as to order. More recent research has provided evidence that two of those families, Eremosynaceae and Tribelaceae, arose from within Escalloniaceae; the Angiosperm Phylogeny Website therefore merges these two families into Escalloniaceae, and also places the family alone in order Escalloniales.

<span class="mw-page-title-main">Loasaceae</span> Family of flowering plants

Loasaceae is a family of 15–20 genera and about 200–260 species of flowering plants in the order Cornales, native to the Americas and Africa. Members of the family include annual, biennial and perennial herbaceous plants, and a few shrubs and small trees. Members of the subfamily Loasoideae are known to exhibit rapid thigmonastic stamen movement when pollinators are present.

<i>Trithuria</i> Genus of aquatic plants

Trithuria is a genus of small ephemeral aquatic herb that represent the only members of the family Hydatellaceae found in India, Australia, and New Zealand. All 13 described species of Trithuria are found in Australia, with the exception of T. inconspicua and T. konkanensis, from New Zealand and India respectively. Until DNA sequence data and a reinterpretation of morphology proved otherwise, these plants were believed to be monocots related to the grasses (Poaceae). They are unique in being the only plants besides two members of Triuridaceae in which the stamens are centred and surrounded by the pistils; in Hydatellaceae the resulting 'flowers' may instead represent condensed inflorescences or non-flowers.

Magnoliidae <i>sensu</i> Chase & Reveal

Magnoliidae is a subclass of Equisetopsida in the sense used by Mark W. Chase and James L. Reveal in their 2009 article "A phylogenetic classification of the land plants to accompany APG III." This subclass comprises the angiosperms or flowering plants.

<span class="mw-page-title-main">Aptandraceae</span> Family of flowering plants

The Aptandraceae is a family of flowering plants in the sandalwood order Santalales that is recognized by some sources; others sink the family in Olacaceae. The members of the tropical plant family are parasitic on other plants, usually on the roots, and grow as trees, shrubs or woody lianas.

<span class="mw-page-title-main">APG IV system</span> 2016 revision of a flowering plant classification

The APG IV system of flowering plant classification is the fourth version of a modern, mostly molecular-based, system of plant taxonomy for flowering plants (angiosperms) being developed by the Angiosperm Phylogeny Group (APG). It was published in 2016, seven years after its predecessor the APG III system was published in 2009, and 18 years after the first APG system was published in 1998. In 2009, a linear arrangement of the system was published separately; the APG IV paper includes such an arrangement, cross-referenced to the 2009 one.

The Pteridophyte Phylogeny Group (PPG) is an informal international group of systematic botanists who collaborate to establish on the classification of pteridophytes that reflects knowledge about plant relationships discovered through phylogenetic studies. In 2016, the group published a classification for extant pteridophytes, termed "PPG I". The paper had 94 authors . The classification was presented as a consensus classification supported by the community of fern taxonomists, but it has been partially exclusive and is highly contested. Alternative classifications of ferns exist and are preferred by more general taxonomists.

References

  1. 1 2 3 Angiosperm Phylogeny Group (2009), "An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III", Botanical Journal of the Linnean Society, 161 (2): 105–121, doi: 10.1111/j.1095-8339.2009.00996.x , hdl: 10654/18083
  2. As easy as APG III - Scientists revise the system of classifying flowering plants, The Linnean Society of London, 2009-10-08, retrieved 2009-10-29
  3. APG III tidies up plant family tree, Horticulture Week, 2009-10-08, retrieved 2009-10-29
  4. Chase, Mark W. & Reveal, James L. (2009), "A phylogenetic classification of the land plants to accompany APG III", Botanical Journal of the Linnean Society, 161 (2): 122–127, doi: 10.1111/j.1095-8339.2009.01002.x
  5. Haston, E., Richardson, J.E., Stevens, P.F., Chase, M.W., Harris, D.J. (2009) The Linear Angiosperm Phylogeny Group (LAPG) III: a linear sequence of the families in APG III. Botanical Journal of the Linnean Society161, 128–131.
  6. Christenhusz, M. J. M., M. F. Fay, J. J. Clarkson, P. Gasson, J. Morales Can, J. B. Jimenez Barrios & M. W. Chase (2010). Petenaeaceae, a new angiosperm family in Huerteales with a distant relationship to Gerrardina (Gerrardinaceae), Botanical Journal of the Linnean Society 164: 16-25. http://onlinelibrary.wiley.com/doi/10.1111/j.1095-8339.2010.01074.x/abstract
  7. Christenhusz, M. J. M., M. W. Chase, & M.F.Fay (2011). Preface to "Linear sequence, classification, synonymy, and bibliography of vascular plants: Lycophytes, ferns, gymnosperms and angiosperms", Phytotaxa 19: 4–6. http://www.mapress.com/phytotaxa/content/2011/f/pt00019p006.pdf
  8. Chase, M.W.; Reveal, J.L. & Fay, M.F. (2009), "A subfamilial classification for the expanded asparagalean families Amaryllidaceae, Asparagaceae and Xanthorrhoeaceae", Botanical Journal of the Linnean Society, 161 (2): 132–136, doi: 10.1111/j.1095-8339.2009.00999.x