Haplogroup O-M176

Last updated
Haplogroup O-M176
Possible time of origin31,108 (95% CI 22,844 <-> 34,893) years before present [1]

29,190 years before present [2]

28,200 [95% CI 26,000 <-> 30,400] years before present [3]
Coalescence age25,660 years before present [2]

25,800 [95% CI 23,400 <-> 28,400] years before present (YFull [3] [4] )
Possible place of originthe Korean Peninsula or a nearby part of northeastern Asia [5]
Ancestor O-P31
Defining mutationsM176/SRY465, P49, 022454[ citation needed ]
Highest frequenciesJapanese, Koreans, Ryukyuans, Manchus

Haplogroup O-M176 (aka O-SRY465) or O1b2 is a human Y-chromosome DNA haplogroup. It is best known for its part in the settlement of Korea and Japan. It is a descendant of Haplogroup O-P31, and it has been estimated to share a most recent common ancestor with its nearest outgroup, Haplogroup O-K18, approximately 31,108 (95% CI 22,844 <-> 34,893) years before present, [1] approximately 29,190 years before present, [2] or approximately 28,200 (95% CI 26,000 <-> 30,400) years before present. [3]

Contents

Distribution

Haplogroup O-M176 is found mainly in the northernmost parts of East Asia, from the Uriankhai and Zakhchin peoples of western Mongolia ( Katoh et al. 2005 ) to the Japanese of Japan, though it also has been detected sporadically in the Buryats ( Jin et al. 2003 ). It has been detected with moderate frequencies in Udegeys ( Jin, Kim & Kim 2010 ) of southern Siberia, rarely among populations of Southeast Asia including Indonesia (Hammer et al. 2006 and Jin et al. 2003), the Philippines ( Jin et al. 2003 ), Thailand ( Jin et al. 2003 ), and Vietnam (Hammer et al. 2006 and Jin et al. 2003), and Micronesians ( Hammer et al. 2006 ). This haplogroup is found with its highest frequency and diversity values among modern populations of Japan and Korea and is rare in most populations in China. Among Han Chinese, it has been detected in some samples of Han Chinese from Beijing (1/51, Jin et al. 2003 and Kim et al. 2011), [5] Xi'an (1/34, Kim et al. 2011), [5] one Han Chinese in Henan, [19] Han Chinese in Taiwan (2/352 = 0.57%, including one of 34 Hakka people and one of 258 miscellaneous Han volunteers), [20] Han Chinese from East China sampled from the infertility clinic at the Affiliated Hospitals of Nanjing Medical University at Jiangsu (6/1147 = 0.52%, Lu et al. 2009), Wuhan (1/160), [21] and South China outside of Jiangsu, Anhui, Zhejiang, and Shanghai (1/65). [22] Among ethnic minorities in China, haplogroup O-M176 has been detected with high frequency in samples of Koreans in China (Xue et al. 2006 and Katoh et al. 2005) and with low frequency among Manchus [23] (Xue et al. 2006, Katoh et al. 2005, and Karafet et al. 2001), Hezhe people, [12] Daurs, [12] Evenks, [11] Sibes ( Xue et al. 2006 ), Kham Tibetans, [24] and Hui. [25] In a study of various populations of Hunan, O1b2-M176 was found in 0.55% (5/903) of all samples; specifically, this haplogroup was observed in 3.0% (1/33) of a sample of Iu Mien from Hunan, 1.9% (2/103) of a sample of Gàn Chinese from Hunan, 1.4% (1/71) of a sample of Kam from Hunan, and 1.1% (1/95) of a sample of Xong Miao from Hunan. [26] In a study published in July 2020, Y-DNA belonging to haplogroup O1b2-M176 was observed in 1.31% (4/305) of a sample of Han Chinese from Zibo, Shandong and in 1.06% (6/565) of a sample of Han Chinese from Zhaotong, Yunnan. [27]

Mitsuru Sakitani suggests that haplogroup O1b2, which is common in today Koreans, Japanese and Manchu, are one of the carriers of Liao civilization or Yangtze civilization. As the Liao civilization and the Yangtze civilization declined several tribes crossed westward and northerly, to the Korean Peninsula and the Japanese archipelago. However, Mitsuru Sakitani said that Currently, very little o1b2 are detected in the Yangtze River region, there are many problems in the theory that originate from the Yangtze River area. [28] [29] [30] Another study calls the haplogroup O1b1 as the major Austroasiatic paternal lineage and the haplogroup O1b2 (of Koreans and Japanese) as the "para-Austroasiatic" paternal lineage. [31]

Subclade distribution

Paragroup O-M176*

Y-DNA that belongs to O-M176(xK10, F3356) has been found in an individual from Hiroshima, [4] an individual from Fukushima, [4] an individual from Beijing, [4] and 1% (7/706) of a sample of males collected in Seoul and Daejeon. [32]

O-M176(x47z) has been found in approximately 9.2% of Japanese males (ranging from 3.5% in the JPT sample from Tokyo [33] to 13.1% in a sample from Shizuoka [34] ) and in approximately 8.3% of Ryukyuan males (ranging from 5.3% in a sample from Miyako [8] to 11.1% in a sample from Okinawa [34] ). [6]

O-K10

The majority of extant members of O-M176 belong to the subclade O-K10 (aka O-F3356 aka O-F1204). O-K10 (TMRCA 8,070 ybp according to TheYtree, [35] 7,900 [95% CI 5,624 <-> 9,449] ybp according to Karmin et al. 2022, [1] 7,457 (99% CI 9,434 - 5,789) years before present according to FamilyTreeDNA, [36] 7,000 [95% CI 8,000 <-> 6,000] ybp according to YFull, [4] or 6,970 years according to 23mofang [2] ) subsumes the prolific subclades O-47z, which occurs with especially high frequency in Japan, and O-L682, which occurs with especially high frequency in Korea, in addition to the relatively rare subclades O-CTS10687, which has been found in Japan, Korea, and China, and O-K3, which has been found among Han Chinese mostly in South Central China. O-L682 and O-K3 are linked by 18 SNPs that define the O-K4 clade, and thus their members are more closely related to one another by paternal lineage than any of them is related to any member of O-47z or O-CTS10687.

O-F3356(x47z, L682) has been found in 2% (14/706) of a sample of Koreans collected in Seoul and Daejeon, South Korea. [32] However, the status of these individuals' Y-DNA in regard to K4, K3, CTS10687, and phylogenetically equivalent SNPs has not been published.

O-CTS10687 has been found in 1.8% (1/56) of the JPT sample of Japanese from Tokyo, Japan. [37] [4]

O-47z

Haplogroup O-47z
Possible time of origin7,870 [95% CI 5,720–12,630] years ago (Hammer et al. 2006)

7,613 (95% CI 5,309 <-> 9,130) ybp [1]

7,000 [95% CI 6,100 <-> 7,900] ybp [3]
Coalescence age5,780 ybp [2]

5,600 (95% CI 6,500 <-> 4,700) ybp [4]
Possible place of originJapanese Archipelago (Hammer et al. 2006) or Korean Peninsula (Jin et al. 2003)
AncestorO-M176
Defining mutations47z
Highest frequenciesJapanese, Ryukyuans, Koreans

O-47z or O-CTS11986 is a subclade of O-K10. It is found with high frequency among the Japanese and Ryukyuan populations of Japan, and with lower frequency among Koreans.

Haplogroup O-47z has been detected in approximately 22% of males who speak a Japonic language, while it has not been found at all among Ainu males whose Y-DNA has been tested in two genetic studies (Tajima et al. 2004, n=16; Hammer et al. 2006, n=4). Based on the STR haplotype diversity within Haplogroup O-47z, it has been estimated in a study published in 2006 that this haplogroup has expanded from a single founder who has lived approximately 3,810 (95% CI 1,640 <–> 7,960) years before present in a model according to which continuous, pure exponential population growth is assumed. [11] In a paper published in 2016, the time to most recent common ancestor of a set of fifteen members of the O-47z clade, all from the JPT (Japanese in Tokyo, Japan) sample of the 1000 Genomes Project, was estimated to be 4,500 years using a relatively slow mutation rate (μ = 0.76 x 10−9 per bp per year as according to Qiaomei Fu et al. 2014) or 3,900 years using a relatively fast mutation rate (μ = 0.888 x 10−9 per bp per year as according to A. Helgason et al. 2015). [33] Haplogroup O-47z also has been found among samples of modern Koreans, though with low frequency in comparison to both the frequency of O-47z in samples of Japanese and the frequency of O-M176(x47z) in samples of Koreans. [5]

Soon-Hee Kim et al. (2011) found haplogroup O-47z (DXYS5Y-Y2) in 8.89% (45/506) of a pool of samples from South Korea. O-47z was found in greatest proportion in the study's sample from the Gyeongsang region (10/84 = 11.9%), which is located in the southeast corner of the Korean Peninsula, and in least proportion in the study's sample from the Seoul-Gyeonggi region (8/110 = 7.3%), which is located on the west coast of the middle of the Korean Peninsula. [38] Haplogroup O-47z also has been observed in a sample of Koreans in China (2/25 = 8.0%). [39]

O-K4

O-K4 is a subclade of O-K10. It includes at least two subclades, O-L682 and O-K3, which have been estimated to share a most recent common ancestor approximately 6,327 (95% CI 4,575 <-> 7,762) years before present. [1]

O-K3
Haplogroup O-F940
Possible time of origin6,327 (95% CI 4,575 <-> 7,762) years before present [1]

6,000 years before present [2]

6,000 (95% CI 7,100 <-> 4,900) ybp [4]
Coalescence age2,650 years before present [2]
Possible place of originEast Asia (origin)
China (MRCA)
AncestorO-F2868
Defining mutationsCTS12145, F1912, F2206, F2703, F940, K3
Highest frequenciesChinese [4] [1] 0.12% [2]

The O-K3 (or O-F940) lineage is a subclade of O-K4 that has been observed to date in three individuals from Hunan, [4] one individual from Jiangxi, [4] and one individual from Henan. [19] The TMRCA of the three individuals from Hunan plus the one individual from Jiangxi has been estimated to be 1,300 (95% CI 800 <-> 2,100) ybp. [4]

O-L682
Haplogroup O-L682
Possible time of origin6,327 [95% CI 4,575 <-> 7,762] ybp [1]

5,990 ybp [2]
Coalescence age4,080 ybp [2]

4,200 (95% CI 4,900 <-> 3,500) ybp [4]
Possible place of originKorean Peninsula or Manchuria
AncestorO-M176, O-F3356
Defining mutationsL682
Highest frequenciesKoreans, Japanese, Ryukyuans, Hezhen, Manchus

The O-L682 subclade of O-K4 is believed to be related to Native Korean population. One study has found O-L682 Y-DNA in 19% (134/706) of Koreans sampled in Seoul and Daejeon. [32] O-L682 also has been found in Japanese in Tokyo, Okayama, Kōchi, and the US and in Chinese (especially in Jilin, Heilongjiang, and Liaoning, with a greater than average presence also in Beijing, Hebei, Inner Mongolia, Gansu, Shaanxi, Shandong, Tianjin, and Anhui, [2] and with some presence in other areas, such as Shanxi, [4] and among some ethnic minorities, such as Nanai people [4] ). Its descendants appear to have begun rapidly increasing in number at approximately the same time as those of its distant cousin O-47z, perhaps 4,000 years ago. [4]

Phylogenetics

Phylogenetic history

Prior to 2002, there were in academic literature at least seven naming systems for the Y-Chromosome phylogenetic tree. This led to considerable confusion. In 2002, the major research groups came together and formed the Y-Chromosome Consortium (YCC). They published a joint paper that created a single new tree that all agreed to use. Later, a group of citizen scientists with an interest in population genetics and genetic genealogy formed a working group to create an amateur tree aiming at being above all timely. The table below brings together all of these works at the point of the landmark 2002 YCC Tree. This allows a researcher reviewing older published literature to quickly move between nomenclatures.

YCC 2002/2008
(Shorthand)
(α)(β)(γ)(δ)(ε)(ζ)(η)YCC 2002
(Longhand)
YCC 2005
(Longhand)
YCC 2008
(Longhand)
YCC 2010r
(Longhand)
ISOGG 2006ISOGG 2007ISOGG 2008ISOGG 2009ISOGG 2010ISOGG 2011ISOGG 2012
O-M175 26VII1U28Eu16H9IO*OOOOOOOOOO
O-M119 26VII1U32Eu16H9HO1*O1aO1aO1aO1aO1aO1aO1aO1aO1aO1a
O-M101 26VII1U32Eu16H9HO1aO1a1O1a1aO1a1aO1a1O1a1O1a1aO1a1aO1a1aO1a1aO1a1a
O-M50 26VII1U32Eu16H10HO1bO1a2O1a2O1a2O1a2O1a2O1a2O1a2O1a2O1a2O1a2
O-P31 26VII1U33Eu16H5IO2*O2O2O2O2O2O2O2O2O2O2
O-M95 26VII1U34Eu16H11GO2a*O2aO2aO2aO2aO2aO2aO2aO2aO2a1O2a1
O-M88 26VII1U34Eu16H12GO2a1O2a1O2a1O2a1O2a1O2a1O2a1O2a1O2a1O2a1aO2a1a
O-SRY46520VII1U35Eu16H5IO2b*O2bO2bO2bO2bO2bO2bO2bO2bO2bO2b
O-47z 5VII1U26Eu16H5IO2b1O2b1aO2b1O2b1O2b1aO2b1aO2b1O2b1O2b1O2b1O2b1
O-M122 26VII1U29Eu16H6LO3*O3O3O3O3O3O3O3O3O3O3
O-M121 26VII1U29Eu16H6LO3aO3aO3a1O3a1O3a1O3a1O3a1O3a1O3a1O3a1aO3a1a
O-M164 26VII1U29Eu16H6LO3bO3bO3a2O3a2O3a2O3a2O3a2O3a2O3a2O3a1bO3a1b
O-M159 13VII1U31Eu16H6LO3cO3cO3a3aO3a3aO3a3O3a3O3a3aO3a3aO3a3aO3a3aO3a3a
O-M7 26VII1U29Eu16H7LO3d*O3cO3a3bO3a3bO3a4O3a4O3a3bO3a3bO3a3bO3a2bO3a2b
O-M113 26VII1U29Eu16H7LO3d1O3c1O3a3b1O3a3b1-O3a4aO3a3b1O3a3b1O3a3b1O3a2b1O3a2b1
O-M134 26VII1U30Eu16H8LO3e*O3dO3a3cO3a3cO3a5O3a5O3a3cO3a3cO3a3cO3a2c1O3a2c1
O-M117 26VII1U30Eu16H8LO3e1*O3d1O3a3c1O3a3c1O3a5aO3a5aO3a3c1O3a3c1O3a3c1O3a2c1aO3a2c1a
O-M162 26VII1U30Eu16H8LO3e1aO3d1aO3a3c1aO3a3c1aO3a5a1O3a5a1O3a3c1aO3a3c1aO3a3c1aO3a2c1a1O3a2c1a1

Original research publications

The following research teams per their publications were represented in the creation of the YCC Tree.

Phylogenetic trees

This phylogenetic tree of haplogroup O subclades is based on the YCC 2008 tree ( Karafet et al. 2008 ) and subsequent published research.

Table of frequencies of O-M176

PopulationFrequencySample SizeSNPsSource
Korean (Gangwon)0.39763M176(x47z)=20
47z=5
Kim et al. 2011
Korean
(National Biobank of Korea)
0.377300M176(x47z)=88
47z=25
Park 2013
Korean (South Korea)0.37375M176/P49(x47z)=25
47z=3
Hammer et al. 2006
Japanese (Fukuoka)0.35310247z=27
M176(x47z)=9
Sato 2014
Japanese (Shizuoka)0.3446147z=13
M176/P49(x47z)=8
Hammer et al. 2006
Japanese (Kawasaki)0.34332147z=78
M176(x47z)=32
Sato 2014
Japanese (Nagasaki)0.34030047z=70
M176(x47z)=32
Sato 2014
Korean (Daejeon)0.338133M176(x47z)=30
47z=15
Park 2012
Japanese (Tokushima)0.33538847z=90
M176(x47z)=40
Sato 2014
Japanese 0.33526347z=66
M176/JST022454(x47z)=22
Nonaka, Minaguchi & Takezaki 2007
Japanese (male students in Kanazawa)0.32629847z=63
M176(x47z)=34
Sato 2014
Korean (Jeju)0.32287M176(x47z)=20
47z=8
Kim et al. 2011
Japanese 0.322432M176=139 Harayama 2014
Japanese (Tokyo)0.3215647z=15
CTS10687=1
L682(xCTS723)=1
CTS723=1
Poznik 2016
Japanese (Kyushu)0.3215347z=15
M176/P49(x47z)=2
Hammer et al. 2006
Japanese (male students in Sapporo)0.31830247z=70
M176(x47z)=26
Sato 2014
Korean (Seoul)0.316573M176(x47z)=125
47z=56
Park 2012
Korean (Jeolla)0.31190M176(x47z)=21
47z=7
Kim et al. 2011
Japanese (Aomori)0.3082647z=7
M176/P49(x47z)=1
Hammer et al. 2006
Korean (Chungcheong)0.30672M176(x47z)=15
47z=7
Kim et al. 2011
Japanese (Hachinohe Kita High School & Sanbongi High School)0.3047947z=18
M176(x47z)=6
Totsuka 2016
Japanese (Tokushima)0.3007047z=17
M176/P49(x47z)=4
Hammer et al. 2006
Korean (Gyeongsang)0.29884M176(x47z)=15
47z=10
Kim et al. 2011
Japanese 0.29315747z=38
M176(x47z)=8
Kim et al. 2011
Okinawa (Miyako High School)0.2893847z=9
M176(x47z)=2
Totsuka 2016
Japanese (Osaka)0.28224147z=43
M176(x47z)=25
Sato 2014
Korean (Seoul/Gyeonggi)0.282110M176(x47z)=23
47z=8
Kim et al. 2011
Japanese (adult males in Kanazawa)0.28023247z=43
M176(x47z)=22
Sato 2014
Korean (PRC)0.28025M176(x47z)=5
47z=2
Xue et al. 2006
Korean (Korea)0.27943M176(x47z)=6
47z=6
Xue et al. 2006
Japanese (adult males in Sapporo)0.27720647z=41
M176(x47z)=16
Sato 2014
Japanese (Kagawa)0.2774747z=11
M176(x47z)=2
Xue et al. 2006
Japanese (Saga)0.27112947z=24
M176(x47z)=11
Totsuka 2016
Manchurians0.2714847z=9
M176(x47z)=4
Jin, Kim & Kim 2010
Korean (Seoul & Daejeon)0.269216M176(x47z)=37
47z=21
Kim et al. 2007
Okinawa (Yaeyama High School & Yaeyama Commercial and Technical High School)0.2654947z=9
M176(x47z)=4
Totsuka 2016
Japanese 0.26210747z=21
M176(x47z)=7
Jin, Kim & Kim 2010
Okinawa 0.2224547z=5
M176/P49(x47z)=5
Hammer et al. 2006
Korean 0.201154M176(x47z)=22
47z=9
Jin, Kim & Kim 2010
Okinawa (Kaihō High School)0.1943647z=4
M176(x47z)=3
Totsuka 2016
Udeges 0.09521M176(x47z)=2 Jin, Kim & Kim 2010
Han (Beijing)0.02051M176(x47z)=1 Kim et al. 2011
Manchu 0.05735M176(x47z)=2 Xue et al. 2006
Uriankhai (Mongolia)0.05060M176=3 Katoh et al. 2005
Mongol (NE Mongolia)0.05020M176=1 Di Cristofaro et al. 2013
Hezhe (PRC)0.04445M176(x47z)=2 Xue et al. 2006
Manchu 0.03852M176/P49(x47z)=2 Hammer et al. 2006
Zakhchin (Mongolia)0.03360M176=2 Katoh et al. 2005
Manchurian0.03330M176(x47z)=1 Kim et al. 2011
Hakka (Taiwan)0.02934M176=1 Trejaut et al. 2014
Buryat 0.02836M176(x47z)=1 Kim et al. 2011
Nanai
(Samar from Khabarovsk)
≤0.02737O-P31=1 Bogunov et al. 2015
Daur 0.02639M176(x47z)=1 Xue et al. 2006
Evenk (PRC)0.02441M176/P49(x47z)=1 Hammer et al. 2006
Xibe 0.02441M176(x47z)=1 Xue et al. 2006
Buryat 0.02050M176(x47z)=1 Jin, Kim & Kim 2010
Mongols (Mongolia)0.006160M176=1 Di Cristofaro et al. 2013
Han (Taiwan)0.004258M176=1 Trejaut et al. 2014
Zhuang 0.00020M176/P49=0 Hammer et al. 2006
Oroqen 0.00022M176/P49=0 Hammer et al. 2006
Hanoi, Vietnam0.00024M176=0 Trejaut et al. 2014
Kalimantan 0.00025M176=0 Trejaut et al. 2014
Evenk (PRC)0.00026M176=0 Xue et al. 2006
Sumatra 0.00026M176=0 Trejaut et al. 2014
Akha (Thailand)0.00027M176=0 Trejaut et al. 2014
Alor 0.00028M176=0 Karafet et al. 2010
Han (Lanzhou)0.00030M176=0 Xue et al. 2006
Even 0.00031M176/P49=0 Hammer et al. 2006
Oroqen 0.00031M176=0 Xue et al. 2006
Uyghur (Ürümqi)0.00031M176=0 Xue et al. 2006
Han (Yili)0.00032M176=0 Xue et al. 2006
Malay 0.00032M176/P49=0 Hammer et al. 2006
Australian aborigines 0.00033M176/P49=0 Hammer et al. 2006
Qiang 0.00033M176=0 Xue et al. 2006
Han (Chengdu)0.00034M176=0 Xue et al. 2006
Hani (PRC)0.00034M176=0 Xue et al. 2006
Li 0.00034M176=0 Xue et al. 2006
She 0.00034M176=0 Xue et al. 2006
Buyi 0.00035M176=0 Xue et al. 2006
Han (Harbin)0.00035M176=0 Xue et al. 2006
Han (Meixian)0.00035M176=0 Xue et al. 2006
Hui (PRC)0.00035M176=0 Xue et al. 2006
Tibetan 0.00035M176=0 Xue et al. 2006
Yao (Bama)0.00035M176=0 Xue et al. 2006
Yao (Liannan)0.00035M176=0 Xue et al. 2006
Batak Toba (Sumatra)0.00038M176=0 Karafet et al. 2010
Uyghur (Yili)0.00039M176=0 Xue et al. 2006
East Indonesia 0.00040M176=0 Trejaut et al. 2014
Han (Guangdong)0.00040M176/P49=0 Hammer et al. 2006
Yi (Butuo, Sichuan)0.00043M176/P49=0 Hammer et al. 2006
Northern Han 0.00044M176/P49=0 Hammer et al. 2006
Khalkh 0.00045M176=0 Kim et al. 2011
Mongol (Inner Mongolia)0.00045M176=0 Xue et al. 2006
Papua New Guinea 0.00046M176/P49=0 Hammer et al. 2006
Khalkh 0.00048M176=0 Jin, Kim & Kim 2010
Philippines 0.00048M176/P49=0 Hammer et al. 2006
Taiwanese aborigines 0.00048M176/P49=0 Hammer et al. 2006
Tujia 0.00049M176/P49=0 Hammer et al. 2006
She 0.00051M176/P49=0 Hammer et al. 2006
Melanesia 0.00053M176/P49=0 Hammer et al. 2006
Mandar (Sulawesi)0.00054M176=0 Karafet et al. 2010
Han (Fujian)0.00055M176=0 Trejaut et al. 2014
Indonesia (East)0.00055M176/P49=0 Hammer et al. 2006
Miao 0.00058M176/P49=0 Hammer et al. 2006
Han (Yunnan)0.00060M176=0 Kim et al. 2011
Minnan (Taiwan)0.00060M176=0 Trejaut et al. 2014
Nias 0.00060M176=0 Karafet et al. 2010
Polynesia 0.00060M176/P49=0 Hammer et al. 2006
Yao 0.00060M176/P49=0 Hammer et al. 2006
Java 0.00061M176=0 Karafet et al. 2010
Filipino0.00064M176=0 Kim et al. 2011
Mongol (Outer Mongolia)0.00065M176=0 Xue et al. 2006
Uyghur 0.00067M176/P49=0 Hammer et al. 2006
Mentawai 0.00074M176=0 Karafet et al. 2010
Thailand 0.00075M176=0 Trejaut et al. 2014
Buryat 0.00081M176/P49=0 Hammer et al. 2006
Han (Taiwan)0.00084M176/P49=0 Hammer et al. 2006
Borneo 0.00086M176=0 Karafet et al. 2010
Sri Lanka 0.00091M176/P49=0 Hammer et al. 2006
Lembata 0.00092M176=0 Karafet et al. 2010
Evenk (Russia)0.00095M176/P49=0 Hammer et al. 2006
Altai 0.00098M176/P49=0 Hammer et al. 2006
Tibet 0.000105M176/P49=0 Hammer et al. 2006
Java 0.000141M176=0 Trejaut et al. 2014
Philippines 0.000146M176=0 Trejaut et al. 2014
Mongolia 0.000149M176/P49=0 Hammer et al. 2006
Sumba 0.000350M176=0 Karafet et al. 2010
Taiwan mountain tribes 0.000355M176=0 Trejaut et al. 2014
Taiwan plains tribes 0.000370M176=0 Trejaut et al. 2014
Flores 0.000394M176=0 Karafet et al. 2010
India 0.000405M176/P49=0 Hammer et al. 2006
Bali 0.000641M176=0 Karafet et al. 2010

See also

Genetics

Y-DNA O subclades

Y-DNA backbone tree

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<span class="mw-page-title-main">Haplogroup J (Y-DNA)</span> Human Y-chromosome DNA haplogroup

Haplogroup J-M304, also known as J, is a human Y-chromosome DNA haplogroup. It is believed to have evolved in Western Asia. The clade spread from there during the Neolithic, primarily into North Africa, the Horn of Africa, the Socotra Archipelago, the Caucasus, Europe, Western Asia, Central Asia, South Asia, and Southeast Asia.

<span class="mw-page-title-main">Haplogroup C-M130</span> Human Y chromosome DNA grouping found primarily in Asia

Haplogroup C is a major Y-chromosome haplogroup, defined by UEPs M130/RPS4Y711, P184, P255, and P260, which are all SNP mutations. It is one of two primary branches of Haplogroup CF alongside Haplogroup F. Haplogroup C is found in ancient populations on every continent except Africa and is the predominant Y-DNA haplogroup among males belonging to many peoples indigenous to East Asia, Central Asia, Siberia, North America and Australia as well as a some populations in Europe, the Levant, and later Japan. The haplogroup is also found with moderate to low frequency among many present-day populations of Southeast Asia, South Asia, and Southwest Asia.

Haplogroup D1 or D-M174 is a subclade of Haplogroup D-CTS3946. This male haplogroup is found primarily in East Asia and the Andaman Islands, though it is also found regularly with low frequency in Central Asia and Mainland Southeast Asia. It's also found as far as Europe and Middle east in lower frequencies.

<span class="mw-page-title-main">Haplogroup N-M231</span> Human Y chromosome DNA grouping common in North Eurasia

Haplogroup N (M231) is a Y-chromosome DNA haplogroup defined by the presence of the single-nucleotide polymorphism (SNP) marker M231.

Haplogroup O-M122 is an Eastern Eurasian Y-chromosome haplogroup. The lineage ranges across Southeast Asia and East Asia, where it dominates the paternal lineages with extremely high frequencies. It is also significantly present in Central Asia, especially among the Naiman tribe of Kazakhs.

<span class="mw-page-title-main">Haplogroup Q-M242</span> Human Y chromosome DNA grouping common among Native Americans

Haplogroup Q or Q-M242 is a Y-chromosome DNA haplogroup. It has one primary subclade, Haplogroup Q1 (L232/S432), which includes numerous subclades that have been sampled and identified in males among modern populations.

Haplogroup R, or R-M207, is a Y-chromosome DNA haplogroup. It is both numerous and widespread amongst modern populations.

<span class="mw-page-title-main">Tungusic peoples</span> Ethno-linguistic family

Tungusic peoples are an ethno-linguistic group formed by the speakers of Tungusic languages. They are native to Siberia and Northeast Asia.

In human genetics, Haplogroup O-M268, also known as O1b, is a Y-chromosome DNA haplogroup. Haplogroup O-M268 is a primary subclade of haplogroup O-F265, itself a primary descendant branch of Haplogroup O-M175.

In human genetics, Haplogroup O-M119 is a Y-chromosome DNA haplogroup. Haplogroup O-M119 is a descendant branch of haplogroup O-F265 also known as O1a, one of two extant primary subclades of Haplogroup O-M175. The same clade previously has been labeled as O-MSY2.2.

<span class="mw-page-title-main">Haplogroup NO</span>

Haplogroup NO, also known as NO-M214 and NO1, is a human Y-chromosome DNA haplogroup. NO is the sole confirmed subclade of Haplogroup K2a1 (K-M2313), which is the sole subclade of Haplogroup K2a (K-M2308). NO is the dominant Y-DNA haplogroup in most parts of eastern and northern Eurasia, including East Asia, Siberia and northern Fennoscandia.

<span class="mw-page-title-main">Haplogroup C-M217</span> Human Y-chromosome DNA haplogroup

Haplogroup C-M217, also known as C2, is a Y-chromosome DNA haplogroup. It is the most frequently occurring branch of the wider Haplogroup C (M130). It is found mostly in Central Asia, Eastern Siberia and significant frequencies in parts of East Asia and Southeast Asia including some populations in the Caucasus, Middle East, South Asia, East Europe. It is found in a much more widespread areas with a low frequency of less than 2%.

Haplogroup O-K18 also known as O-F2320 and Haplogroup O1b1, is a human Y-chromosome DNA haplogroup. Haplogroup O-K18 is a descendant branch of Haplogroup O-P31. Based on its disjunct distribution, O-K18 can be further divided into south subclade O1b1a1-PK4 and north subclade O1b1a2-CTS4040. O-CTS4040 is widely distributed in East Asia, whereas O-PK4 is more frequent in South China and Southeast Asia. O-PK4 is best known for the high frequency of its O-M95 subclade among populations of Southeast Asia and among speakers of Austroasiatic languages in South Asia.

E-P2, also known as E1b1, is a human Y-chromosome DNA haplogroup. This paternal clade had an ancient presence in the Middle East, and is now primarily distributed in Africa where it's believed to have originated, with lower frequencies in the Middle East and Europe.

<span class="mw-page-title-main">Y-DNA haplogroups in populations of East and Southeast Asia</span>

The tables below provide statistics on the human Y-chromosome DNA haplogroups most commonly found among ethnolinguistic groups and populations from East and South-East Asia.

Haplogroup C1 also known as C-F3393, is a major Y-chromosome haplogroup. It is one of two primary branches of the broader Haplogroup C, the other being C2.

<span class="mw-page-title-main">Haplogroup O-M117</span>

Haplogroup O2a2b1a1-M117 is a subclade of O2a2b1-M134 that occurs frequently in China and in neighboring countries like Nepal, Bhutan, and Korea, especially among Sino-Tibetan language speaking people.

<span class="mw-page-title-main">Haplogroup C-M8</span>

Haplogroup C-M8 also known as Haplogroup C1a1 is a Y-chromosome haplogroup. It is one of two branches of Haplogroup C1a, one of the descendants of Haplogroup C-M130.

Haplogroup D-M55 (M64.1/Page44.1) also known as Haplogroup D1a2a is a Y-chromosome haplogroup. It is one of two branches of Haplogroup D1a. The other is D1a1, which is found with high frequency in Tibetans and other Tibeto-Burmese populations and geographical close groups. D is also distributed with low to medium frequency in Central Asia, East Asia, and Mainland Southeast Asia.

This article explains the genetic makeup and population history of East Asian peoples and closely related populations, which are collectively referred to as "East-Eurasians" in population genomics.

References

Footnotes

  1. 256/800=32.0% O-M176 in a pool of all Japanese samples of (Xue et al. 2006), (Katoh et al. 2005), (Jin, Kim & Kim 2010), (Nonaka, Minaguchi & Takezaki 2007), (Poznik et al. 2016), and all non-Ainu and non-Okinawan Japanese samples of (Hammer et al. 2006).
  2. 202/677=29.8% O-M176 in a pool of all ethnic South Korean samples of (Hammer et al. 2006), (Xue et al. 2006), (Katoh et al. 2005), (Kim et al. 2007), and (Park 2013)
  3. 61/255=23.92% O-M176 in a pool of all Ryukyuan data from (Hammer et al. 2006), (Nonaka, Minaguchi & Takezaki 2007), and Totsuka et al. 2016
  4. 30/123=24.3% O-M176 in a pool of all ethnic North Korea samples of (Jeong 2018)
  5. 733/3271 = 22.41% O-47z in a pool of all non-Ainu and non-Okinawan Japanese samples of (Hammer et al. 2006), (Xue et al. 2006), (Nonaka, Minaguchi & Takezaki 2007), Kim et al. 2011, Sato et al. 2014, and Totsuka et al. 2016
  6. 44/255 = 17.3% O-47z in a pool of all Okinawan samples of (Hammer et al. 2006), (Nonaka, Minaguchi & Takezaki 2007), and Totsuka et al. 2016
  7. 299/3271 = 9.14% O-P49(x47z) in a pool of all non-Ainu and non-Okinawan Japanese samples of (Hammer et al. 2006), (Xue et al. 2006), (Nonaka, Minaguchi & Takezaki 2007), Kim et al. 2011, Sato et al. 2014, and Totsuka et al. 2016
  8. 17/255 = 6.7% O-P49(x47z) in a pool of all Okinawan samples of (Hammer et al. 2006), (Nonaka, Minaguchi & Takezaki 2007), and Totsuka et al. 2016

Citations

  1. 1 2 3 4 5 6 7 8 Monika Karmin, Rodrigo Flores, Lauri Saag, et al. (2022), "Episodes of Diversification and Isolation in Island Southeast Asian and Near Oceanian Male Lineages." Mol. Biol. Evol. 39(3): msac045 doi:10.1093/molbev/msac045
  2. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 Phylogenetic tree of haplogroup O-M268 at 23mofang
  3. 1 2 3 4 YFull Haplogroup YTree v6.01 at 04 January 2018
  4. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 YFull Haplogroup YTree v5.04 at 16 May 2017
  5. 1 2 3 4 5 Kim et al. 2011.
  6. 1 2 3 4 Sato Y, Shinka T, Ewis AA, Yamauchi A, Iwamoto T, Nakahori Y (2014). "Overview of genetic variation in the Y chromosome of modern Japanese males". Anthropological Science. 122 (3): 131–136. doi: 10.1537/ase.140709 .
  7. 1 2 3 4 5 6 Soon-Hee Kim, Ki-Cheol Kim, Dong-Jik Shin, Han-Jun Jin, Kyoung-Don Kwak, Myun-Soo Han, Joon-Myong Song, Won Kim, and Wook Kim, "High frequencies of Y-chromosome haplogroup O2b-SRY465 lineages in Korea: a genetic perspective on the peopling of Korea." Investigative Genetics 2011, 2:10. http://www.investigativegenetics.com/content/2/1/10
  8. 1 2 3 4 5 6 Shoji Totsuka, The Super Science High School Consortium, Youichi Sato, and Masashi Tanaka, "A study of the geographic distribution of Y chromosomal and mitochondrial DNA haplogroups in Japanese population by Super Science High School Consortium (SSH)." Anthropological Science (Japanese Series) Vol. 124(2), 85–91, 2016.
  9. 1 2 Zhang X, He G, Li W, Wang Y, Li X, Chen Y, et al. (30 September 2021). "Genomic Insight Into the Population Admixture History of Tungusic-Speaking Manchu People in Northeast China". Frontiers in Genetics. 12: 754492. doi: 10.3389/fgene.2021.754492 . PMC   8515022 . PMID   34659368.
  10. Karafet et al. 2001.
  11. 1 2 3 Hammer et al. 2006.
  12. 1 2 3 4 5 Xue et al. 2006.
  13. 1 2 Katoh et al. 2005.
  14. 1 2 Bogunov et al. 2015.
  15. Jin, Kim & Kim 2010.
  16. Kharkov VN (2012). Структура и филогеография генофонда коренного населения Сибири по маркерам Y-хромосомы [The structure and phylogeography of the gene pool of the indigenous population of Siberia by Y-chromosome markers](PDF) (Thesis) (in Russian).
  17. 1 2 Yali Xue, Tatiana Zerjal, Weidong Bao, Suling Zhu, Qunfang Shu, Jiujin Xu, Ruofu Du, Songbin Fu, Pu Li, Matthew E. Hurles, Huanming Yang, and Chris Tyler-Smith, "Male Demography in East Asia: A North–South Contrast in Human Population Expansion Times." Genetics 172: 2431–2439 (April 2006). DOI: 10.1534/genetics.105.054270
  18. 1 2 Yan S, Wang CC, Zheng HX, Wang W, Qin ZD, Wei LH, et al. (2014). "Y chromosomes of 40% Chinese descend from three Neolithic super-grandfathers". PLOS ONE. 9 (8): e105691. arXiv: 1310.3897 . Bibcode:2014PLoSO...9j5691Y. doi: 10.1371/journal.pone.0105691 . PMC   4149484 . PMID   25170956.
  19. Trejaut et al. 2014.
  20. Huang DX, Yang QE, Yin H, Zhai XD, Yang RZ (July 2006). "[Genetic polymorphism of 23 Y chromosome biallelic markers in Wuhan Han population]" [Genetic polymorphism of 23 Y chromosome biallelic markers in Wuhan Han population]. Yi Chuan = Hereditas (in Chinese). 28 (7): 791–798. PMID   16825164.
  21. Yan S, Wang CC, Li H, Li SL, Jin L (September 2011). "An updated tree of Y-chromosome Haplogroup O and revised phylogenetic positions of mutations P164 and PK4". European Journal of Human Genetics. 19 (9): 1013–1015. doi:10.1038/ejhg.2011.64. PMC   3179364 . PMID   21505448.
  22. 新日本人の起源 神話からDNA科学へ、崎谷満 (著)
  23. Wang CC, Wang LX, Shrestha R, Zhang M, Huang XY, Hu K, et al. (4 August 2014). "Genetic structure of Qiangic populations residing in the western Sichuan corridor". PLOS ONE. 9 (8): e103772. Bibcode:2014PLoSO...9j3772W. doi: 10.1371/journal.pone.0103772 . PMC   4121179 . PMID   25090432.
  24. 陆艳 (2011). 中国西部人群的遗传混合 [Genetic Mixture of People in Western China] (Thesis) (in Chinese).
  25. Xia ZY, Yan S, Wang CC, Zheng HX, Zhang F, Liu YC, et al. (9 August 2019). "Inland-coastal bifurcation of southern East Asians revealed by Hmong-Mien genomic history" (PDF). doi:10.1101/730903. S2CID   202028061.{{cite journal}}: Cite journal requires |journal= (help)
  26. Yin C, Su K, He Z, Zhai D, Guo K, Chen X, et al. (July 2020). "Genetic Reconstruction and Forensic Analysis of Chinese Shandong and Yunnan Han Populations by Co-Analyzing Y Chromosomal STRs and SNPs". Genes. 11 (7): 743. doi: 10.3390/genes11070743 . PMC   7397191 . PMID   32635262.
  27. 新日本人の起源 神話からDNA科学へ、崎谷満
  28. 崎谷 満 (2009). DNA・考古・言語の学際研究が示す新・日本列島史 日本人集団・日本語の成立史[New Japanese archipelago history shown by interdisciplinary research on DNA, archeology, and language Japanese group, history of establishment of Japanese] (in Japanese). 勉誠出版. ISBN   978-4-585-05394-1. OCLC   429025925.[ page needed ]
  29. "遼河周辺から満洲あたりから見られる日本人の起源" [The origin of the Japanese seen from around Manchuria from around Ryokawa]. HLA haplotypes and Japanese migration (in Japanese). Archived from the original on 2016-08-26.
  30. Robbeets M, Savelyev A (2017). Language Dispersal Beyond Farming. John Benjamins Publishing Company. ISBN   978-90-272-6464-0.[ page needed ]
  31. 1 2 3 4 Kwon SY, Lee HY, Lee EY, Yang WI, Shin KJ (November 2015). "Confirmation of Y haplogroup tree topologies with newly suggested Y-SNPs for the C2, O2b and O3a subhaplogroups". Forensic Science International. Genetics. 19: 42–46. doi:10.1016/j.fsigen.2015.06.003. PMID   26103100.
  32. 1 2 Poznik et al. 2016.
  33. 1 2 3 4 Michael F. Hammer, Tatiana M. Karafet, Hwayong Park, Keiichi Omoto, Shinji Harihara, Mark Stoneking, and Satoshi Horai, "Dual origins of the Japanese: common ground for hunter-gatherer and farmer Y chromosomes." J Hum Genet (2006) 51:47–58. DOI 10.1007/s10038-005-0322-0
  34. TheYTree phylogenetic tree of O-M268 as of 2022 Sept 7
  35. FamilyTreeDNA Discover
  36. 1 2 Poznik et al. 2016
  37. Kim 2011.
  38. Xue, 2006 & p4.
  39. Nonaka, Minaguchi & Takezaki 2007.
  40. HGDP 2009.

Sources

Further reading