40S ribosomal protein S23

RPS23
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 4CXG, 4CXH, 4UG0, 4V6X, 5A2Q, 5AJ0, 4KZY, 4UJC, 4KZX, 4UJE, 4UJD, 4KZZ, 5FLX, 4D61, 4V5Z
Identifiers
Aliases	RPS23 , S23, ribosomal protein S23, MABAS, PAMAS, MCINS, BTDD, uS12
External IDs	OMIM: 603683 MGI: 1913725 HomoloGene: 799 GeneCards: RPS23
Gene location (Human) Chr. Chromosome 5 (human) [1] Band 5q14.2 Start 82,273,320 bp [1] End 82,278,396 bp [1]
Gene location (Mouse) Chr. Chromosome 13 (mouse) [2] Band 13|13 C3 Start 91,071,077 bp [2] End 91,073,069 bp [2]
RNA expression pattern Bgee Top expressed in ovary fallopian tube right lung More reference expression data BioGPS More reference expression data
Gene ontology Molecular function GO:0001948 protein binding RNA binding structural constituent of ribosome Cellular component cytosol ribosome membrane intracellular anatomical structure small ribosomal subunit nucleoplasm cytosolic small ribosomal subunit cytoplasm endoplasmic reticulum rough endoplasmic reticulum polysomal ribosome synapse Biological process viral transcription SRP-dependent cotranslational protein targeting to membrane translational initiation nuclear-transcribed mRNA catabolic process, nonsense-mediated decay rRNA processing protein biosynthesis stress granule assembly maintenance of translational fidelity cytoplasmic translation Sources:Amigo / QuickGO
Orthologs
Species	Human	Mouse
Entrez	6228	66475
Ensembl	ENSG00000186468	ENSMUSG00000049517
UniProt	P62266	P62267
RefSeq (mRNA)	NM_001025	NM_024175
RefSeq (protein)	NP_001016	NP_077137
Location (UCSC)	Chr 5: 82.27 – 82.28 Mb	Chr 13: 91.07 – 91.07 Mb
PubMed search	[3]	[4]
Wikidata
View/Edit Human View/Edit Mouse

40S ribosomal protein S23 is a protein that in humans is encoded by the RPS23 gene. ^{[5] [6]}

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S12P family of ribosomal proteins. It is located in the cytoplasm. The protein shares significant amino acid similarity with S. cerevisiae ribosomal protein S28. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000186468 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000049517 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Kenmochi N, Kawaguchi T, Rozen S, Davis E, Goodman N, Hudson TJ, Tanaka T, Page DC (Aug 1998). "A map of 75 human ribosomal protein genes". Genome Res. 8 (5): 509–23. doi: 10.1101/gr.8.5.509 . PMID   9582194.
6. "Entrez Gene: RPS23 ribosomal protein S23".

Further reading

• Wool IG, Chan YL, Glück A (1996). "Structure and evolution of mammalian ribosomal proteins". Biochem. Cell Biol. 73 (11–12): 933–47. doi:10.1139/o95-101. PMID   8722009.
• Kato S, Sekine S, Oh SW, et al. (1995). "Construction of a human full-length cDNA bank". Gene. 150 (2): 243–50. doi:10.1016/0378-1119(94)90433-2. PMID   7821789.
• Robertson NG, Khetarpal U, Gutiérrez-Espeleta GA, et al. (1995). "Isolation of novel and known genes from a human fetal cochlear cDNA library using subtractive hybridization and differential screening". Genomics. 23 (1): 42–50. doi:10.1006/geno.1994.1457. PMID   7829101.
• Hori N, Murakawa K, Matoba R, et al. (1993). "A cDNA sequence of human ribosomal protein, homologue of yeast S28". Nucleic Acids Res. 21 (18): 4394. doi:10.1093/nar/21.18.4394. PMC   310080 . PMID   8415000.
• Vladimirov SN, Ivanov AV, Karpova GG, et al. (1996). "Characterization of the human small-ribosomal-subunit proteins by N-terminal and internal sequencing, and mass spectrometry". Eur. J. Biochem. 239 (1): 144–9. doi: 10.1111/j.1432-1033.1996.0144u.x . PMID   8706699.
• Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi: 10.1101/gr.6.9.791 . PMID   8889548.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Andersen JS, Lam YW, Leung AK, et al. (2005). "Nucleolar proteome dynamics". Nature. 433 (7021): 77–83. Bibcode:2005Natur.433...77A. doi:10.1038/nature03207. PMID   15635413. S2CID   4344740.
• Yu Y, Ji H, Doudna JA, Leary JA (2005). "Mass spectrometric analysis of the human 40S ribosomal subunit: native and HCV IRES-bound complexes". Protein Sci. 14 (6): 1438–46. doi:10.1110/ps.041293005. PMC   2253395 . PMID   15883184.