CBL (gene)

"CBL2" redirects here. For the airport in Canada, see Severn Bridge/Buck Lake Water Aerodrome.

CBL
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1B47, 1FBV, 1YVH, 2CBL, 2JUJ, 2K4D, 2OO9, 2Y1M, 2Y1N, 3BUM, 3BUN, 3BUO, 3BUW, 3BUX, 3OB1, 3OB2, 3PLF, 4A49, 4A4B, 4A4C, 4GPL
Identifiers
Aliases	CBL , C-CBL2, FRA11B, NSLL, RNF55, Cbl proto-oncogene
External IDs	OMIM: 165360 MGI: 88279 HomoloGene: 3802 GeneCards: CBL
Gene location (Human) Chr. Chromosome 11 (human) [1] Band 11q23.3 Start 119,206,298 bp [1] End 119,313,926 bp [1]
Gene location (Mouse) Chr. Chromosome 9 (mouse) [2] Band 9 A5.1- A5.2|9 24.72 cM Start 44,054,273 bp [2] End 44,145,346 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in trigeminal ganglion spongy bone saphenous vein spinal ganglia superficial temporal artery nipple blood visceral pleura superior vestibular nucleus internal globus pallidus Top expressed in thymus spermatocyte spermatid blood ventromedial nucleus subiculum left colon seminiferous tubule nucleus accumbens molar More reference expression data BioGPS More reference expression data
Gene ontology Molecular function calcium ion binding DNA-binding transcription factor activity phosphotyrosine residue binding signal transducer activity metal ion binding ubiquitin-protein transferase activity protein binding ephrin receptor binding SH3 domain binding phosphatidylinositol 3-kinase regulatory subunit binding transferase activity receptor tyrosine kinase binding ubiquitin protein ligase activity cadherin binding epidermal growth factor receptor binding protein kinase binding protein tyrosine kinase binding Cellular component membrane plasma membrane nucleus perinuclear region of cytoplasm flotillin complex growth cone cytoplasm cytosol focal adhesion axon mast cell granule membrane raft Golgi apparatus cilium cell projection Biological process positive regulation of receptor-mediated endocytosis negative regulation of epidermal growth factor receptor signaling pathway epidermal growth factor receptor signaling pathway negative regulation of apoptotic process regulation of signaling fibroblast growth factor receptor signaling pathway cell surface receptor signaling pathway protein ubiquitination positive regulation of phosphatidylinositol 3-kinase signaling transforming growth factor beta receptor signaling pathway cellular response to DNA damage stimulus cellular response to nerve growth factor stimulus cellular response to platelet-derived growth factor stimulus positive regulation of epidermal growth factor receptor signaling pathway regulation of transcription, DNA-templated neuron death cellular response to oxygen-glucose deprivation response to activity response to starvation response to ethanol protein polyubiquitination protein monoubiquitination negative regulation of epidermal growth factor-activated receptor activity male gonad development response to gamma radiation response to testosterone entry of bacterium into host cell mast cell degranulation response to antibiotic membrane organization negative regulation of neuron death cytokine-mediated signaling pathway interleukin-6-mediated signaling pathway ubiquitin-dependent protein catabolic process signal transduction regulation of Rap protein signal transduction cellular response to epidermal growth factor stimulus regulation of platelet-derived growth factor receptor-alpha signaling pathway Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 867 12402 Ensembl ENSG00000110395 ENSMUSG00000034342 UniProt P22681 P22682 RefSeq (mRNA) NM_005188 NM_007619 RefSeq (protein) NP_005179 NP_031645 Location (UCSC) Chr 11: 119.21 – 119.31 Mb Chr 9: 44.05 – 44.15 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Cbl (named after Casitas B-lineage Lymphoma) is a mammalian gene family. CBL gene, a part of the Cbl family, encodes the protein CBL which is an E3 ubiquitin-protein ligase involved in cell signalling and protein ubiquitination. Mutations to this gene have been implicated in a number of human cancers, particularly acute myeloid leukaemia. ^[5]

Discovery

In 1989 a virally encoded portion of the chromosomal mouse Cbl gene was the first member of the Cbl family to be discovered ^[6] and was named v-Cbl to distinguish it from normal mouse c-Cbl. The virus used in the experiment was a mouse-tropic strain of Murine leukemia virus isolated from the brain of a mouse captured at Lake Casitas, California known as Cas-Br-M, ^[7] and was found to have excised approximately a third of the original c-Cbl gene from a mouse into which it was injected. Sequencing revealed that the portion carried by the retrovirus encoded a tyrosine kinase binding domain , and that this was the oncogenic form as retroviruses carrying full-length c-Cbl did not induce tumor formation. The resultant transformed retrovirus was found to consistently induce a type of pre-B lymphoma, known as Casitas B-lineage lymphoma, in infected mice.

Structure

Full length c-Cbl has been found to consist of several regions encoding for functionally distinct protein domains:

• N-terminal tyrosine kinase binding domain (TKB domain): determines the protein which it can bind to
• RING finger domain motif: recruits enzymes involved in ubiquitination
• Proline-rich region: the site of interaction between Cbl and cytosolic proteins involved in Cbl's adaptor functions
• C-terminal ubiquitin-associated domain (UBA domain): the site of ubiquitin binding

This domain structure and the tyrosine and serine-rich content of the protein product is typical of an "adaptor molecule" used in cell signalling pathways. ^[8]

Homologues

Three mammalian homologues have been characterized, which all differ in their ability to function as adaptor proteins due to the differing lengths of their C-terminal UBA domains:

1. c-Cbl: ubiquitously expressed, 906 and 913 amino acids in length in humans and mice respectively
2. Cbl-b : ubiquitously expressed, 982 amino acids long.
3. Cbl-c : lacks the UBA domain and is therefore only 474 amino acids in length. It is primarily expressed in epithelial cells however its function is poorly understood.

Both c-Cbl and Cbl-b have orthologues in D. melanogaster (D-Cbl) and C. elegans (Sli-1), hinting at a long evolutionary path for these proteins. ^[8]

Function

Ubiquitin ligase

Ubiquitination is the process of chemically attaching ubiquitin monomers to a protein, thereby targeting it for degradation. As this is a multi-step process, several different enzymes are involved, the final one being a member of the E3 family of ligases. Cbl functions as an E3 ligase, and therefore is able to catalyse the formation of a covalent bond between ubiquitin and Cbl's protein substrate - typically a receptor tyrosine kinase. The RING-finger domain mediates this transfer, however like other E3 ligases of the RING type no intermediate covalent bond is formed between ubiquitin and the RING-finger domain. The stepwise attachment of ubiquitin to the substrate receptor tyrosine kinase can lead to its removal from the plasma membrane and subsequent trafficking to the lysosome for degradation.

Interactions

Cbl gene has been shown to interact with:

• Abl gene, ^{[9] [10]}
• ARHGEF7, ^[11]
• C-Met, ^{[12] [13]}
• CD2AP, ^{[14] [15] [16]}
• CSF1R. ^[17]
• CRK, ^{[18] [19]}
• CRKL, ^{[20] [21] [22] [23] [24] [25] [26] [27]}
• EGFR, ^[12] < ^{[28] [29]}
• FRS2, ^[30]
• FYN, ^{[24] [31]}
• Grb2, ^{[12] [18] [19] [20] [30] [32] [33] [34] [35] [36] [37] [38] [39]}
• HCK, ^{[40] [41]}
• IGF1R, ^[42]
• LCP2;, ^{[20] [43]}
• NCK1, ^{[9] [20]}
• PDGFRA, ^[44]
• PIK3R1, ^{[18] [45] [46]}
• PIK3R2, ^{[21] [47]}
• PLCG1, ^{[28] [48]}
• PTK2B, ^{[14] [49]}
• PTPN11, ^[50]
• SH2B2, ^{[12] [51]}
• SH3KBP1 ^{[13] [52] [53] [54] [55]}
• SHC1, ^{[18] [32]}
• SLA2, ^[56]
• SORBS1, ^{[14] [57]}
• SORBS2, ^{[10] [14]}
• SPRY2, ^{[12] [58] [59]}
• Syk, ^{[60] [61] [62]}
• UBE2L3, ^{[58] [63] [64]}
• VAV1, ^{[61] [65]}
• YWHAB, ^[36]
• YWHAQ, ^{[66] [67]} and
• ZAP-70, ^{[68] [69]}

References

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2. GRCm38: Ensembl release 89: ENSMUSG00000034342 - Ensembl, May 2017
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Further reading

• Smit L, Borst J (1997). "The Cbl family of signal transduction molecules". Crit Rev Oncog. 8 (4): 359–79. doi:10.1615/critrevoncog.v8.i4.50. PMID   9622055.
• Lupher ML, Andoniou CE, Bonita D, Miyake S, Band H (1998). "The c-Cbl oncoprotein". Int. J. Biochem. Cell Biol. 30 (4): 439–44. doi:10.1016/S1357-2725(97)00075-7. PMID   9675877.
• Fang N, Fang D, Wang HY, Altman A, Liu YC (2002). "Regulation of immune responses by E3 ubiquitin-protein ligases". Curr. Dir. Autoimmun. Current Directions in Autoimmunity. 5: 161–75. doi:10.1159/000060552. ISBN   3-8055-7308-1. PMID   11826757.

External links

• Quips article describing CBL function at PDBe
• OMIM entries on NOONAN SYNDROME-LIKE DISORDER WITH OR WITHOUT JUVENILE MYELOMONOCYTIC LEUKEMIA and CBL
• Human CBL genome location and CBL gene details page in the UCSC Genome Browser .