The Allee effect is a phenomenon in biology characterized by a correlation between population size or density and the mean individual fitness (often measured as per capita population growth rate) of a population or species. [1]
Although the concept of Allee effect had no title at the time, it was first described in the 1930s by its namesake, Warder Clyde Allee. Through experimental studies, Allee was able to demonstrate that goldfish have a greater survival rate when there are more individuals within the tank. [2] This led him to conclude that aggregation can improve the survival rate of individuals, and that cooperation may be crucial in the overall evolution of social structure. The term "Allee principle" was introduced in the 1950s, a time when the field of ecology was heavily focused on the role of competition among and within species. [1] [3] The classical view of population dynamics stated that due to competition for resources, a population will experience a reduced overall growth rate at higher density and increased growth rate at lower density. In other words, individuals in a population would be better off when there are fewer individuals around due to a limited amount of resources (see logistic growth). However, the concept of the Allee effect introduced the idea that the reverse holds true when the population density is low. Individuals within a species often require the assistance of another individual for more than simple reproductive reasons in order to persist. The most obvious example of this is observed in animals that hunt for prey or defend against predators as a group.
The generally accepted definition of Allee effect is positive density dependence, or the positive correlation between population density and individual fitness. It is sometimes referred to as "undercrowding" and it is analogous (or even considered synonymous by some) to "depensation" in the field of fishery sciences. [1] [4] Listed below are a few significant subcategories of the Allee effect used in the ecology literature.
The component Allee effect is the positive relationship between any measurable component of individual fitness and population density. The demographic Allee effect is the positive relationship between the overall individual fitness and population density.
The distinction between the two terms lies on the scale of the Allee effect: the presence of a demographic Allee effect suggests the presence of at least one component Allee effect, while the presence of a component Allee effect does not necessarily result in a demographic Allee effect. For example, cooperative hunting and the ability to more easily find mates, both influenced by population density, are component Allee effects, as they influence individual fitness of the population. At low population density, these component Allee effects would add up to produce an overall demographic Allee effect (increased fitness with higher population density). When population density reaches a high number, negative density dependence often offsets the component Allee effects through resource competition, thus erasing the demographic Allee effect. [5] Allee effects might occur even at high population density for some species. [1]
The strong Allee effect is a demographic Allee effect with a critical population size or density. The weak Allee effect is a demographic Allee effect without a critical population size or density.
The distinction between the two terms is based on whether or not the population in question exhibits a critical population size or density. A population exhibiting a weak Allee effect will possess a reduced per capita growth rate (directly related to individual fitness of the population) at lower population density or size. However, even at this low population size or density, the population will always exhibit a positive per capita growth rate. Meanwhile, a population exhibiting a strong Allee effect will have a critical population size or density under which the population growth rate becomes negative. Therefore, when the population density or size hits a number below this threshold, the population will be destined for extinction without any further aid. A strong Allee effect is often easier to demonstrate empirically using time series data, as one can pinpoint the population size or density at which per capita growth rate becomes negative. [1]
Due to its definition as the positive correlation between population density and average fitness, the mechanisms for which an Allee effect arises are therefore inherently tied to survival and reproduction. In general, these Allee effect mechanisms arise from cooperation or facilitation among individuals in the species. Examples of such cooperative behaviors include better mate finding, environmental conditioning, and group defense against predators. As these mechanisms are more-easily observable in the field, they tend to be more commonly associated with the Allee effect concept. Nevertheless, mechanisms of Allee effect that are less conspicuous such as inbreeding depression and sex ratio bias should be considered as well.
Although numerous ecological mechanisms for Allee effects exist, the list of most commonly cited facilitative behaviors that contribute to Allee effects in the literature include: mate limitation, cooperative defense, cooperative feeding, and environmental conditioning. [5] While these behaviors are classified in separate categories, they can overlap and tend to be context dependent (will operate only under certain conditions – for example, cooperative defense will only be useful when there are predators or competitors present).
Classic economic theory predicts that human exploitation of a population is unlikely to result in species extinction because the escalating costs to find the last few individuals will exceed the fixed price one achieves by selling the individuals on the market. However, when rare species are more desirable than common species, prices for rare species can exceed high harvest costs. This phenomenon can create an "anthropogenic" Allee effect where rare species go extinct but common species are sustainably harvested. [11] The anthropogenic Allee effect has become a standard approach for conceptualizing the threat of economic markets on endangered species. [12] However, the original theory was posited using a one dimensional analysis of a two dimensional model. [11] [12] It turns out that a two dimensional analysis yields an Allee curve in human exploiter and biological population space and that this curve separating species destined to extinction vs persistence can be complicated. Even very high population sizes can potentially pass through the originally proposed Allee thresholds on predestined paths to extinction. [12]
Declines in population size can result in a loss of genetic diversity, and owing to genetic variation's role in the evolutionary potential of a species, this could in turn result in an observable Allee effect. As a species' population becomes smaller, its gene pool will be reduced in size as well. One possible outcome from this genetic bottleneck is a reduction in fitness of the species through the process of genetic drift, as well as inbreeding depression. [13] This overall fitness decrease of a species is caused by an accumulation of deleterious mutations throughout the population. Genetic variation within a species could range from beneficial to detrimental. Nevertheless, in a smaller sized gene pool, there is a higher chance of a stochastic event in which deleterious alleles become fixed (genetic drift). While evolutionary theory states that expressed deleterious alleles should be purged through natural selection, purging would be most efficient only at eliminating alleles that are highly detrimental or harmful. Mildly deleterious alleles such as those that act later in life would be less likely to be removed by natural selection, and conversely, newly acquired beneficial mutations are more likely to be lost by random chance in smaller genetic pools than larger ones. [1] [14]
Although the long-term population persistence of several species with low genetic variation has recently prompted debate on the generality of inbreeding depression, there are various empirical evidences for genetic Allee effects. [15] One such case was observed in the endangered Florida panther (Puma concolor coryi). The Florida panther experienced a genetic bottleneck in the early 1990s where the population was reduced to ≈25 adult individuals. This reduction in genetic diversity was correlated with defects that include lower sperm quality, abnormal testosterone levels, cowlicks, and kinked tails. [16] In response, a genetic rescue plan was put in motion and several female pumas from Texas were introduced into the Florida population. This action quickly led to the reduction in the prevalence of the defects previously associated with inbreeding depression. Although the timescale for this inbreeding depression is larger than of those more immediate Allee effects, it has significant implications on the long-term persistence of a species.
Demographic stochasticity refers to variability in population growth arising from sampling random births and deaths in a population of finite size. [17] In small populations, demographic stochasticity will decrease the population growth rate, causing an effect similar to the Allee effect, [18] [19] which will increase the risk of population extinction. Whether or not demographic stochasticity can be considered a part of Allee effect is somewhat contentious however. The most current definition of Allee effect considers the correlation between population density and mean individual fitness. Therefore, random variation resulting from birth and death events would not be considered part of Allee effect as the increased risk of extinction is not a consequence of the changing fates of individuals within the population. [20]
Meanwhile, when demographic stochasticity results in fluctuations of sex ratios, it arguably reduces the mean individual fitness as population declines. For example, a fluctuation in small population that causes a scarcity in one sex would in turn limit the access of mates for the opposite sex, decreasing the fitness of the individuals within the population. This type of Allee effect will likely be more prevalent in monogamous species than polygynous species. [21]
Demographic and mathematical studies demonstrate that the existence of an Allee effect can reduce the speed of range expansion of a population [22] [23] [24] [25] and can even prevent biological invasions. [26]
Recent results based on spatio-temporal models show that the Allee effect can also promote genetic diversity in expanding populations. [27] These results counteract commonly held notions that the Allee effect possesses net adverse consequences. Reducing the growth rate of the individuals ahead of the colonization front simultaneously reduces the speed of colonization and enables a diversity of genes coming from the core of the population to remain on the front. The Allee effect also affects the spatial distribution of diversity. Whereas spatio-temporal models which do not include an Allee effect lead to a vertical pattern of genetic diversity (i.e., a strongly structured spatial distribution of genetic fractions), those including an Allee effect lead to a "horizontal pattern" of genetic diversity (i.e., an absence of genetic differentiation in space). [27]
A simple mathematical example of an Allee effect is given by the cubic growth model.
where the population has a negative growth rate for , and a positive growth rate for (assuming ). This is a departure from the logistic growth equation
where
After dividing both sides of the equation by the population size N, in the logistic growth the left hand side of the equation represents the per capita population growth rate, which is dependent on the population size N, and decreases with increasing N throughout the entire range of population sizes. In contrast, when there is an Allee effect the per-capita growth rate increases with increasing N over some range of population sizes [0, N]. [28]
Spatio-temporal models can take Allee effect into account as well. A simple example is given by the reaction-diffusion model
where
When a population is made up of small sub-populations additional factors to the Allee effect arise.
If the sub-populations are subject to different environmental variations (i.e. separated enough that a disaster could occur at one sub-population site without affecting the other sub-populations) but still allow individuals to travel between sub-populations, then the individual sub-populations are more likely to go extinct than the total population. In the case of a catastrophic event decreasing numbers at a sub-population, individuals from another sub-population site may be able to repopulate the area.
If all sub-populations are subject to the same environmental variations (i.e. if a disaster affected one, it would affect them all) then fragmentation of the population is detrimental to the population and increases extinction risk for the total population. In this case, the species receives none of the benefits of a small sub-population (loss of the sub-population is not catastrophic to the species as a whole) and all of the disadvantages (inbreeding depression, loss of genetic diversity and increased vulnerability to environmental instability) and the population would survive better unfragmented. [26] [29]
Clumping results due to individuals aggregating in response to: local habitat or landscape differences, daily and seasonal weather changes, reproductive processes, or as the result of social attractions.
Theoretical ecology is the scientific discipline devoted to the study of ecological systems using theoretical methods such as simple conceptual models, mathematical models, computational simulations, and advanced data analysis. Effective models improve understanding of the natural world by revealing how the dynamics of species populations are often based on fundamental biological conditions and processes. Further, the field aims to unify a diverse range of empirical observations by assuming that common, mechanistic processes generate observable phenomena across species and ecological environments. Based on biologically realistic assumptions, theoretical ecologists are able to uncover novel, non-intuitive insights about natural processes. Theoretical results are often verified by empirical and observational studies, revealing the power of theoretical methods in both predicting and understanding the noisy, diverse biological world.
Inbreeding is the production of offspring from the mating or breeding of individuals or organisms that are closely related genetically. By analogy, the term is used in human reproduction, but more commonly refers to the genetic disorders and other consequences that may arise from expression of deleterious recessive traits resulting from incestuous sexual relationships and consanguinity. Animals avoid incest only rarely.
Small populations can behave differently from larger populations. They are often the result of population bottlenecks from larger populations, leading to loss of heterozygosity and reduced genetic diversity and loss or fixation of alleles and shifts in allele frequencies. A small population is then more susceptible to demographic and genetic stochastic events, which can impact the long-term survival of the population. Therefore, small populations are often considered at risk of endangerment or extinction, and are often of conservation concern.
In population ecology and economics, maximum sustainable yield (MSY) is theoretically, the largest yield that can be taken from a species' stock over an indefinite period. Fundamental to the notion of sustainable harvest, the concept of MSY aims to maintain the population size at the point of maximum growth rate by harvesting the individuals that would normally be added to the population, allowing the population to continue to be productive indefinitely. Under the assumption of logistic growth, resource limitation does not constrain individuals' reproductive rates when populations are small, but because there are few individuals, the overall yield is small. At intermediate population densities, also represented by half the carrying capacity, individuals are able to breed to their maximum rate. At this point, called the maximum sustainable yield, there is a surplus of individuals that can be harvested because growth of the population is at its maximum point due to the large number of reproducing individuals. Above this point, density dependent factors increasingly limit breeding until the population reaches carrying capacity. At this point, there are no surplus individuals to be harvested and yield drops to zero. The maximum sustainable yield is usually higher than the optimum sustainable yield and maximum economic yield.
Genetic diversity is the total number of genetic characteristics in the genetic makeup of a species, it ranges widely from the number of species to differences within species and can be attributed to the span of survival for a species. It is distinguished from genetic variability, which describes the tendency of genetic characteristics to vary.
Habitat fragmentation describes the emergence of discontinuities (fragmentation) in an organism's preferred environment (habitat), causing population fragmentation and ecosystem decay. Causes of habitat fragmentation include geological processes that slowly alter the layout of the physical environment, and human activity such as land conversion, which can alter the environment much faster and causes the extinction of many species. More specifically, habitat fragmentation is a process by which large and contiguous habitats get divided into smaller, isolated patches of habitats.
A metapopulation consists of a group of spatially separated populations of the same species which interact at some level. The term metapopulation was coined by Richard Levins in 1969 to describe a model of population dynamics of insect pests in agricultural fields, but the idea has been most broadly applied to species in naturally or artificially fragmented habitats. In Levins' own words, it consists of "a population of populations".
In population genetics and population ecology, population size is a countable quantity representing the number of individual organisms in a population. Population size is directly associated with amount of genetic drift, and is the underlying cause of effects like population bottlenecks and the founder effect. Genetic drift is the major source of decrease of genetic diversity within populations which drives fixation and can potentially lead to speciation events.
Minimum viable population (MVP) is a lower bound on the population of a species, such that it can survive in the wild. This term is commonly used in the fields of biology, ecology, and conservation biology. MVP refers to the smallest possible size at which a biological population can exist without facing extinction from natural disasters or demographic, environmental, or genetic stochasticity. The term "population" is defined as a group of interbreeding individuals in similar geographic area that undergo negligible gene flow with other groups of the species. Typically, MVP is used to refer to a wild population, but can also be used for ex situ conservation.
Conservation genetics is an interdisciplinary subfield of population genetics that aims to understand the dynamics of genes in a population for the purpose of natural resource management, conservation of genetic diversity, and the prevention of species extinction. Scientists involved in conservation genetics come from a variety of fields including population genetics, research in natural resource management, molecular ecology, molecular biology, evolutionary biology, and systematics. The genetic diversity within species is one of the three fundamental components of biodiversity, so it is an important consideration in the wider field of conservation biology.
Genetic load is the difference between the fitness of an average genotype in a population and the fitness of some reference genotype, which may be either the best present in a population, or may be the theoretically optimal genotype. The average individual taken from a population with a low genetic load will generally, when grown in the same conditions, have more surviving offspring than the average individual from a population with a high genetic load. Genetic load can also be seen as reduced fitness at the population level compared to what the population would have if all individuals had the reference high-fitness genotype. High genetic load may put a population in danger of extinction.
Genetic viability is the ability of the genes present to allow a cell, organism or population to survive and reproduce. The term is generally used to mean the chance or ability of a population to avoid the problems of inbreeding. Less commonly genetic viability can also be used in respect to a single cell or on an individual level.
Molecular ecology is a field of evolutionary biology that is concerned with applying molecular population genetics, molecular phylogenetics, and more recently genomics to traditional ecological questions. It is virtually synonymous with the field of "Ecological Genetics" as pioneered by Theodosius Dobzhansky, E. B. Ford, Godfrey M. Hewitt, and others. These fields are united in their attempt to study genetic-based questions "out in the field" as opposed to the laboratory. Molecular ecology is related to the field of conservation genetics.
Inbreeding depression is the reduced biological fitness that has the potential to result from inbreeding. Biological fitness refers to an organism's ability to survive and perpetuate its genetic material. Inbreeding depression is often the result of a population bottleneck. In general, the higher the genetic variation or gene pool within a breeding population, the less likely it is to suffer from inbreeding depression, though inbreeding and outbreeding depression can simultaneously occur.
Extinction vortices are a class of models through which conservation biologists, geneticists and ecologists can understand the dynamics of and categorize extinctions in the context of their causes. This model shows the events that ultimately lead small populations to become increasingly vulnerable as they spiral toward extinction. Developed by M. E. Gilpin and M. E. Soulé in 1986, there are currently four classes of extinction vortices. The first two deal with environmental factors that have an effect on the ecosystem or community level, such as disturbance, pollution, habitat loss etc. Whereas the second two deal with genetic factors such as inbreeding depression and outbreeding depression, genetic drift etc.
A fishery is an area with an associated fish or aquatic population which is harvested for its commercial or recreational value. Fisheries can be wild or farmed. Population dynamics describes the ways in which a given population grows and shrinks over time, as controlled by birth, death, and migration. It is the basis for understanding changing fishery patterns and issues such as habitat destruction, predation and optimal harvesting rates. The population dynamics of fisheries is used by fisheries scientists to determine sustainable yields.
Genetic purging is the reduction of the frequency of a deleterious allele, caused by an increased efficiency of natural selection prompted by inbreeding.
Coexistence theory is a framework to understand how competitor traits can maintain species diversity and stave-off competitive exclusion even among similar species living in ecologically similar environments. Coexistence theory explains the stable coexistence of species as an interaction between two opposing forces: fitness differences between species, which should drive the best-adapted species to exclude others within a particular ecological niche, and stabilizing mechanisms, which maintains diversity via niche differentiation. For many species to be stabilized in a community, population growth must be negative density-dependent, i.e. all participating species have a tendency to increase in density as their populations decline. In such communities, any species that becomes rare will experience positive growth, pushing its population to recover and making local extinction unlikely. As the population of one species declines, individuals of that species tend to compete predominantly with individuals of other species. Thus, the tendency of a population to recover as it declines in density reflects reduced intraspecific competition (within-species) relative to interspecific competition (between-species), the signature of niche differentiation.
Genetic rescue is seen as a mitigation strategy designed to restore genetic diversity and reduce extinction risks in small, isolated and frequently inbred populations. It is largely implemented through translocation, a type of demographic rescue and technical migration that adds individuals to a population to prevent its potential extinction. This demographic rescue may be similar to genetic rescue, as each increase population size and/or fitness. This overlap in meaning has led some researchers to consider a more detailed definition for each type of rescue that details 'assessment and documentation of pre- and post-translocation genetic ancestry'. Not every example of genetic rescue is clearly successful and the current definition of genetic rescue does not mandate that the process result in a 'successful' outcome. Despite an ambiguous definition, genetic rescue is viewed positively, with many perceived successes.
The rescue effect is a phenomenon which was first described by Brown and Kodric-Brown, and is commonly used in metapopulation dynamics and many other disciplines in ecology. This populational process explains how the migration of individuals can increase the persistence of small isolated populations by helping to stabilize a metapopulation, thus reducing the chances of extinction. In other words, immigration can lead to the recolonization of previously extinct patches, promoting the long-term persistence of the network of populations.
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