Domestication

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Dogs and sheep were among the first animals to be domesticated. Backing sheep at sheepdog competition.jpg
Dogs and sheep were among the first animals to be domesticated.

Domestication is a sustained multi-generational relationship in which one group of organisms assumes a significant degree of influence over the reproduction and care of another group to secure a more predictable supply of resources from that second group. [1] The domestication of plants and animals was a major cultural innovation ranked in importance with the conquest of fire, the manufacturing of tools, and the development of verbal language. [2]

Contents

Charles Darwin recognized the small number of traits that made domestic species different from their wild ancestors. He was also the first to recognize the difference between conscious selective breeding in which humans directly select for desirable traits, and unconscious selection where traits evolve as a by-product of natural selection or from selection on other traits. [3] [4] [5] There is a genetic difference between domestic and wild populations. There is also such a difference between the domestication traits that researchers believe to have been essential at the early stages of domestication, and the improvement traits that have appeared since the split between wild and domestic populations. [6] [7] [8] Domestication traits are generally fixed within all domesticates, and were selected during the initial episode of domestication of that animal or plant, whereas improvement traits are present only in a proportion of domesticates, though they may be fixed in individual breeds or regional populations. [7] [8] [9]

The dog was the first domesticated species, [10] [11] [12] and was established across Eurasia before the end of the Late Pleistocene era, well before cultivation and before the domestication of other animals. [11] The archaeological and genetic data suggest that long-term bidirectional gene flow between wild and domestic stocks – including donkeys, horses, New and Old World camelids, goats, sheep, and pigs – was common. [8] [13] Given its importance to humans and its value as a model of evolutionary and demographic change, domestication has attracted scientists from archaeology, paleontology, anthropology, botany, zoology, genetics, and the environmental sciences. [14] Among birds, the major domestic species today is the chicken, important for meat and eggs, though economically valuable poultry include the turkey, guineafowl and numerous other species. Birds are also widely kept as cagebirds, from songbirds to parrots. The longest established invertebrate domesticates are the honey bee and the silkworm. Land snails are raised for food, while species from several phyla are kept for research, and others are bred for biological control.

The domestication of plants began at least 12,000 years ago with cereals in the Middle East, and the bottle gourd in Asia. Agriculture developed in at least 11 different centres around the world, domesticating different crops and animals.

Overview

Succulents like this jelly bean plant (Sedum rubrotinctum) need infrequent watering, making them convenient as houseplants. Sedum rubrotinctum.jpg
Succulents like this jelly bean plant ( Sedum rubrotinctum ) need infrequent watering, making them convenient as houseplants.

Domestication, from the Latin domesticus, 'belonging to the house', [15] is "a sustained multi-generational, mutualistic relationship in which one organism assumes a significant degree of influence over the reproduction and care of another organism in order to secure a more predictable supply of a resource of interest, and through which the partner organism gains advantage over individuals that remain outside this relationship, thereby benefitting and often increasing the fitness of both the domesticator and the target domesticate." [1] [16] [17] [18] [19] This definition recognizes both the biological and the cultural components of the domestication process and the impacts on both humans and the domesticated animals and plants. All past definitions of domestication have included a relationship between humans with plants and animals, but their differences lay in who was considered as the lead partner in the relationship. This new definition recognizes a mutualistic relationship in which both partners gain benefits. Domestication has vastly enhanced the reproductive output of crop plants, livestock, and pets far beyond that of their wild progenitors. Domesticates have provided humans with resources that they could more predictably and securely control, move, and redistribute, which has been the advantage that had fueled a population explosion of the agro-pastoralists and their spread to all corners of the planet. [19]

Houseplants and ornamentals are plants domesticated primarily for aesthetic enjoyment in and around the home, while those domesticated for large-scale food production are called crops. Domesticated plants deliberately altered or selected for special desirable characteristics are cultigens. Animals domesticated for home companionship are called pets, while those domesticated for food or work are known as livestock.

This biological mutualism is not restricted to humans with domestic crops and livestock but is well-documented in nonhuman species, especially among a number of social insect domesticators and their plant and animal domesticates, for example the ant–fungus mutualism that exists between leafcutter ants and certain fungi. [1]

Domestication syndrome is the suite of phenotypic traits arising during domestication that distinguish crops from their wild ancestors. [6] [20] The term is also applied to vertebrate animals, and includes increased docility and tameness, coat color changes, reductions in tooth size, changes in craniofacial morphology, alterations in ear and tail form (e.g., floppy ears), more frequent and nonseasonal estrus cycles, alterations in adrenocorticotropic hormone levels, changed concentrations of several neurotransmitters, prolongations in juvenile behavior, and reductions in both total brain size and of particular brain regions. [21]

Cause and timing

Evolution of temperatures in the postglacial period, after the Last Glacial Maximum, showing very low temperatures for the most part of the Younger Dryas, rapidly rising afterwards to reach the level of the warm Holocene, based on Greenland ice cores. Evolution of temperature in the Post-Glacial period according to Greenland ice cores (Younger Dryas).jpg
Evolution of temperatures in the postglacial period, after the Last Glacial Maximum, showing very low temperatures for the most part of the Younger Dryas, rapidly rising afterwards to reach the level of the warm Holocene, based on Greenland ice cores.

The domestication of animals and plants was triggered by the climatic and environmental changes that occurred after the peak of the Last Glacial Maximum around 21,000 years ago and which continue to this present day. These changes made obtaining food difficult. The first domesticate was the wolf (Canis lupus) at least 15,000 years ago. The Younger Dryas that occurred 12,900 years ago was a period of intense cold and aridity that put pressure on humans to intensify their foraging strategies. By the beginning of the Holocene from 11,700 years ago, favorable climatic conditions and increasing human populations led to small-scale animal and plant domestication, which allowed humans to augment the food that they were obtaining through hunter-gathering. [2]

The Neolithic transition led to agricultural societies emerging in locations across Eurasia, North Africa, and South and Central America. In the Fertile Crescent 10,000-11,000 years ago, zooarchaeology indicates that goats, pigs, sheep, and taurine cattle were the first livestock to be domesticated. Two thousand years later, humped zebu cattle were domesticated in what is today Baluchistan in Pakistan. In East Asia 8,000 years ago, pigs were domesticated from wild boar that were genetically different from those found in the Fertile Crescent. The horse was domesticated on the Central Asian steppe 5,500 years ago. Both the chicken in Southeast Asia and the cat in Egypt were domesticated 4,000 years ago. [2]

The sudden appearance of the domestic dog (Canis lupus familiaris) in the archaeological record then led to a rapid shift in the evolution, ecology, and demography of both humans and numerous species of animals and plants. [23] [8] It was followed by livestock and crop domestication, and the transition of humans from foraging to farming in different places and times across the planet. [23] [24] [25] Around 10,000 YBP, a new way of life emerged for humans through the management and exploitation of plant and animal species, leading to higher-density populations in the centers of domestication, [23] [26] the expansion of agricultural economies, and the development of urban communities. [23] [27]

Animals

Theory

Karakul sheep and shepherds in Iran. Photograph by Harold F. Weston, 1920s Harold f Weston - Iran7.jpg
Karakul sheep and shepherds in Iran. Photograph by Harold F. Weston, 1920s

The domestication of animals is the mutual relationship between animals with the humans who have influence on their care and reproduction. [1] Charles Darwin recognized the small number of traits that made domestic species different from their wild ancestors. He was also the first to recognize the difference between conscious selective breeding in which humans directly select for desirable traits, and unconscious selection where traits evolve as a by-product of natural selection or from selection on other traits. [3] [4] [5]

There is a genetic difference between domestic and wild populations. There is also such a difference between the domestication traits that researchers believe to have been essential at the early stages of domestication, and the improvement traits that have appeared since the split between wild and domestic populations. [6] [7] [8] Domestication traits are generally fixed within all domesticates, and were selected during the initial episode of domestication of that animal or plant, whereas improvement traits are present only in a proportion of domesticates, though they may be fixed in individual breeds or regional populations. [7] [8] [9]

Domestication of animals should not be confused with taming. Taming is the conditioned behavioral modification of an individual animal, to reduce its natural avoidance of humans, and to tolerate the presence of humans. Domestication is the permanent genetic modification of a bred lineage that leads to an inherited predisposition to respond calmly to human presence. [29] [30] [31]

Certain animal species, and certain individuals within those species, make better candidates for domestication than others because they exhibit certain behavioral characteristics: [19] :Fig 1 [32] [33] [34]

  1. The size and organization of their social structure
  2. The availability and the degree of selectivity in their choice of mates
  3. The ease and speed with which the parents bond with their young, and the maturity and mobility of the young at birth
  4. The degree of flexibility in diet and habitat tolerance; and
  5. Responses to humans and new environments, including reduced flight response and reactivity to external stimuli.

Mammals

The beginnings of animal domestication involved a protracted coevolutionary process with multiple stages along different pathways. [8] There are three proposed major pathways that most animal domesticates followed into domestication:

  1. commensals, adapted to a human niche (e.g., dogs, cats, fowl, possibly pigs);
  2. prey animals sought for food (e.g., sheep, goats, cattle, water buffalo, yak, pig, reindeer, llama and alpaca); and
  3. animals targeted for draft and non-food resources (e.g., horse, donkey, camel). [8] [13] [19] [35] [36] [37] [38]

The dog was the first domesticant, [11] [12] and was established across Eurasia before the end of the Late Pleistocene era, well before cultivation and before the domestication of other animals. [11] Humans did not intend to domesticate animals from either the commensal or prey pathways, or at least they did not envision a domesticated animal would result from it. In both of those cases, humans became entangled with these species as the relationship between them intensified, and humans' role in their survival and reproduction led gradually to formalised animal husbandry. [8] Although the directed pathway proceeded from capture to taming, the other two pathways are not as goal-oriented, and archaeological records suggest that they took place over much longer time frames. [14]

Unlike other domestic species which were primarily selected for production-related traits, dogs were initially selected for their behaviors. [39] [40] The archaeological and genetic data suggest that long-term bidirectional gene flow between wild and domestic stocks – including donkeys, horses, New and Old World camelids, goats, sheep, and pigs – was common. [8] [13] One study has concluded that human selection for domestic traits likely counteracted the homogenizing effect of gene flow from wild boars into pigs and created domestication islands in the genome. The same process may also apply to other domesticated animals. [41] [42]

Birds

The red junglefowl of Southeast Asia was domesticated, apparently for cockfighting, some 7,000 years ago. Red Junglefowl (male) - Thailand.jpg
The red junglefowl of Southeast Asia was domesticated, apparently for cockfighting, some 7,000 years ago.

Domesticated birds principally mean poultry, raised for meat and eggs: [43] some Galliformes (chicken, turkey, guineafowl) and Anseriformes (waterfowl: duck, goose, swan). Also widely domesticated are cagebirds such as songbirds and parrots; these are kept both for pleasure and for use in research. [44] The domestic pigeon has been used both for food and as a means of communication between far-flung places through the exploitation of the pigeon's homing instinct; research suggests it was domesticated as early as 10,000 years ago. [45] Chicken fossils in China were dated 7,400 years ago. The chicken's wild ancestor is Gallus gallus , the red junglefowl of Southeast Asia. It appears to have been kept initially for cockfighting rather than for food. [46]

Invertebrates

Sericulturalists preparing silkworms for spinning of the silk Sericuturist.jpg
Sericulturalists preparing silkworms for spinning of the silk

Two insects, the silkworm and the western honey bee, have been domesticated for over 5,000 years, often for commercial use. The silkworm is raised for the silk threads wound around its pupal cocoon; the western honey bee, for honey, and, lately, for pollination of crops. [47]

Several other invertebrates have been domesticated, both terrestrial and aquatic, including some such as Drosophila melanogaster fruit flies and the freshwater cnidarian Hydra for research into genetics and physiology. Few have a long history of domestication. Most are used for food or other products such as shellac and cochineal. The phyla involved are Cnidaria, Platyhelminthes (for biological control), Annelida, Mollusca, Arthropoda (marine crustaceans as well as insects and spiders), and Echinodermata. While many marine molluscs are used for food, only a few have been domesticated, including squid, cuttlefish and octopus, all used in research on behaviour and neurology. Terrestrial snails in the genera Helix and Murex are raised for food. Several parasitic or parasitoidal insects including the fly Eucelatoria , the beetle Chrysolina , and the wasp Aphytis are raised for biological control. Conscious or unconscious artificial selection has many effects on species under domestication; variability can readily be lost by inbreeding, selection against undesired traits, or genetic drift, while in Drosophila, variability in eclosion time (when adults emerge) has increased. [48]

Plants

The initial domestication of animals impacted most on the genes that controlled their behavior, but the initial domestication of plants impacted most on the genes that controlled their morphology (seed size, plant architecture, dispersal mechanisms) and their physiology (timing of germination or ripening). [19] [25]

The domestication of wheat provides an example. Wild wheat shatters and falls to the ground to reseed itself when ripe, but domesticated wheat stays on the stem for easier harvesting. This change was possible because of a random mutation in the wild populations at the beginning of wheat's cultivation. Wheat with this mutation was harvested more frequently and became the seed for the next crop. Therefore, without realizing, early farmers selected for this mutation. The result is domesticated wheat, which relies on farmers for its reproduction and dissemination. [49]

History

Farmers with wheat and cattle - Ancient Egyptian art 3,400 years ago Maler der Grabkammer des Menna 012.jpg
Farmers with wheat and cattle – Ancient Egyptian art 3,400 years ago

The earliest human attempts at plant domestication occurred in the Middle East. There is early evidence for conscious cultivation and trait selection of plants by pre-Neolithic groups in Syria: grains of rye with domestic traits dated 13,000 years ago have been recovered from Abu Hureyra in Syria, [50] but this appears to be a localised phenomenon resulting from cultivation of stands of wild rye, rather than a definitive step towards domestication. [50]

The bottle gourd (Lagenaria siceraria) plant, used as a container before the advent of ceramic technology, appears to have been domesticated 10,000 years ago. The domesticated bottle gourd reached the Americas from Asia by 8,000 years ago, most likely due to the migration of peoples from Asia to America. [51]

Cereal crops were first domesticated around 11,000 years ago in the Fertile Crescent in the Middle East. The first domesticated crops were generally annuals with large seeds or fruits. These included pulses such as peas and grains such as wheat. The Middle East was especially suited to these species; the dry-summer climate was conducive to the evolution of large-seeded annual plants, and the variety of elevations led to a great variety of species. As domestication took place humans began to move from a hunter-gatherer society to a settled agricultural society. This change would eventually lead, some 4000 to 5000 years later, to the first city states and eventually the rise of civilization itself.

Continued domestication was gradual, a process of intermittent trial and error, and often resulted in diverging traits and characteristics. [52] Over time perennials and small trees including the apple and the olive were domesticated. Some plants, such as the macadamia nut and the pecan, were not domesticated until recently.

In other parts of the world very different species were domesticated. In the Americas squash, maize, beans, and perhaps manioc (also known as cassava) formed the core of the diet. In East Asia millet, rice, and soy were the most important crops. Some areas of the world such as Southern Africa, Australia, California and southern South America never saw local species domesticated.

Differences from wild plants

Domesticated plants may differ from their wild relatives in many ways, including

Traits that are being genetically improved

There are many challenges facing modern farmers, including climate change, pests, soil salinity, drought, and periods with limited sunlight. [55]

Drought is one of the most serious challenges facing farmers today. With shifting climates comes shifting weather patterns, meaning that regions that could traditionally rely on a substantial amount of precipitation were, quite literally, left out to dry. In light of these conditions, drought resistance in major crop plants has become a clear priority. [56] One method is to identify the genetic basis of drought resistance in naturally drought resistant plants, i.e. the Bambara groundnut. Next, transferring these advantages to otherwise vulnerable crop plants. Rice, which is one of the most vulnerable crops in terms of drought, has been successfully improved by the addition of the Barley hva1 gene into the genome using transgenetics. Drought resistance can also be improved through changes in a plant's root system architecture, [57] such as a root orientation that maximizes water retention and nutrient uptake. There must be a continued focus on the efficient usage of available water on a planet that is expected to have a population in excess of nine-billion people by 2050.

Another specific area of genetic improvement for domesticated crops is the crop plant's uptake and utilization of soil potassium, an essential element for crop plants yield and overall quality. A plant's ability to effectively uptake potassium and utilize it efficiently is known as its potassium utilization efficiency. [58] It has been suggested that first optimizing plant root architecture and then root potassium uptake activity may effectively improve plant potassium utilization efficiency.

Crop plants that are being genetically improved

Cereals, rice, wheat, corn, sorghum and barley, make up a huge amount of the global diet across all demographic and social scales. These cereal crop plants are all autogamous, i.e. self-fertilizing, which limits overall diversity in allelic combinations, and therefore adaptability to novel environments. [59] To combat this issue the researchers suggest an "Island Model of Genomic Selection". By breaking a single large population of cereal crop plants into several smaller sub-populations which can receive "migrants" from the other subpopulations, new genetic combinations can be generated.

The Bambara groundnut is a durable crop plant that, like many underutilized crops, has received little attention in an agricultural sense. The Bambara Groundnut is drought resistant and is known to be able to grow in almost any soil conditions, no matter how impoverished an area may be. New genomic and transcriptomic approaches are allowing researchers to improve this relatively small-scale crop, as well as other large-scale crop plants. [60] The reduction in cost, and wide availability of both microarray technology and Next Generation Sequencing have made it possible to analyze underutilized crops, like the groundnut, at genome-wide level. Not overlooking particular crops that don't appear to hold any value outside of the developing world will be key to not only overall crop improvement, but also to reducing the global dependency on only a few crop plants, which holds many intrinsic dangers to the global population's food supply. [60]

Challenges facing genetic improvement

The semi-arid tropics, ranging from parts of North and South Africa, Asia especially in the South Pacific, all the way to Australia are notorious for being both economically destitute and agriculturally difficult to cultivate and farm effectively. Barriers include everything from lack of rainfall and diseases, to economic isolation and environmental irresponsibility. [61] There is a large interest in the continued efforts, of the International Crops Research Institute for the Semi-Arid Tropics (ICRSAT) to improve staple foods. some mandated crops of ICRISAT include the groundnut, pigeonpea, chickpea, sorghum and pearl millet, which are the main staple foods for nearly one billion people in the semi-arid tropics. [62] As part of the ICRISAT efforts, some wild plant breeds are being used to transfer genes to cultivated crops by interspecific hybridization involving modern methods of embryo rescue and tissue culture. [63] One example of early success has been work to combat the very detrimental peanut clump virus. Transgenetic plants containing the coat protein gene for resistance against peanut clump virus have already been produced successfully. [62] Another region threatened by food security are the Pacific Island Countries, which are disproportionally faced with the negative effects of climate change. The Pacific Islands are largely made up of a chain of small bodies of land, which obviously limits the amount of geographical area in which to farm. This leaves the region with only two viable options 1.) increase agricultural production or 2.) increase food importation. The latter of course runs into the issues of availability and economic feasibility, leaving only the first option as a viable means to solve the region's food crisis. It is much easier to misuse the limited resources remaining, as compared with solving the problem at its core. [64]

Working with wild plants to improve domestics

Work has also has been focusing on improving domestic crops through the use of crop wild relatives. [62] The amount and depth of genetic material available in crop wild relatives is larger than originally believed, and the range of plants involved, both wild and domestic, is ever expanding. [65] Through the use of new biotechnological tools such as genome editing, cisgenesis/intragenesis, the transfer of genes between crossable donor species including hybrids, and other omic approaches. [65]

Wild plants can be hybridized with crop plants to form perennial crops from annuals, increase yield, growth rate, and resistance to outside pressures like disease and drought. [66] It is important to remember that these changes take significant lengths of time to achieve, sometimes even decades. However, the outcome can be extremely successful as is the case with a hybrid grass variant known as Kernza. [66] Over the course of nearly three decades, work was done on an attempted hybridization between an already domesticated grass strain, and several of its wild relatives. The domesticated strain as was more uniform in its orientation, but the wild strains were larger and propagated faster. The resulting Kernza crop has traits from both progenitors: uniform orientation and a linearly vertical root system from the domesticated crop, along with increased size and rate of propagation from the wild relatives. [66]

Fungi and micro-organisms

Button mushrooms are widely cultivated for food. Champignons Agaricus.jpg
Button mushrooms are widely cultivated for food.

Several species of fungi have been domesticated for use directly as food, or in fermentation to produce foods and drugs. The white button mushroom Agaricus bisporus is widely grown for food. [67] The yeast Saccharomyces cerevisiae have been used for thousands of years to ferment beer and wine, and to leaven bread. [68] Mould fungi including Penicillium are used to mature cheeses and other dairy products, as well as to make drugs such as antibiotics. [69]

Effects

On domestic animals

Selection of animals for visible "desirable" traits may have undesired consequences. Captive and domesticated animals often have smaller size, piebald color, shorter faces with smaller and fewer teeth, diminished horns, weak muscle ridges, and less genetic variability. Poor joint definition, late fusion of the limb bone epiphyses with the diaphyses, hair changes, greater fat accumulation, smaller brains, simplified behavior patterns, extended immaturity, and more pathology are among the defects of domestic animals. All of these changes have been documented by archaeological evidence, and confirmed by animal breeders in the 20th century. [70] In 2014, a study proposed the theory that under selection, docility in mammals and birds results partly from a slowed pace of neural crest development, that would in turn cause a reduced fear–startle response due to mild neurocristopathy that causes domestication syndrome. The theory was unable to explain curly tails nor domestication syndrome exhibited by plants. [21]

A side effect of domestication has been zoonotic diseases. For example, cattle have given humanity various viral poxes, measles, and tuberculosis; pigs and ducks have given influenza; and horses have given the rhinoviruses. Many parasites have their origins in domestic animals. [4] [ page needed ] The advent of domestication resulted in denser human populations which provided ripe conditions for pathogens to reproduce, mutate, spread, and eventually find a new host in humans. [71]

Paul Shepard writes "Man substitutes controlled breeding for natural selection; animals are selected for special traits like milk production or passivity, at the expense of overall fitness and nature-wide relationships...Though domestication broadens the diversity of forms – that is, increases visible polymorphism – it undermines the crisp demarcations that separate wild species and cripples our recognition of the species as a group. Knowing only domestic animals dulls our understanding of the way in which unity and discontinuity occur as patterns in nature, and substitutes an attention to individuals and breeds. The wide variety of size, color, shape, and form of domestic horses, for example, blurs the distinction among different species of Equus that once were constant and meaningful." [72]

On society

Jared Diamond in his book Guns, Germs, and Steel describes the universal tendency for populations that have acquired agriculture and domestic animals to develop a large population and to expand into new territories. He recounts migrations of people armed with domestic crops overtaking, displacing or killing indigenous hunter-gatherers, [4] :112 whose lifestyle is coming to an end. [4] :86

Some anarcho-primitivist authors describe domestication as the process by which previously nomadic human populations shifted towards a sedentary or settled existence through agriculture and animal husbandry. They claim that this kind of domestication demands a totalitarian relationship with both the land and the plants and animals being domesticated. They say that whereas, in a state of wildness, all life shares and competes for resources, domestication destroys this balance. Domesticated landscape (e.g. pastoral lands/agricultural fields and, to a lesser degree, horticulture and gardening) ends the open sharing of resources; where "this was everyone's", it is now "mine". Anarcho-primitivists state that this notion of ownership laid the foundation for social hierarchy as property and power emerged. It also involved the destruction, enslavement, or assimilation of other groups of early people who did not make such a transition. [73]

On diversity

Industrialized wheat harvest - North America today Wheat harvest.jpg
Industrialized wheat harvest – North America today

In 2016, a study found that humans have had a major impact on global genetic diversity as well as extinction rates, including a contribution to megafaunal extinctions. Pristine landscapes no longer exist and have not existed for millennia, and humans have concentrated the planet's biomass into human-favored plants and animals. Domesticated ecosystems provide food, reduce predator and natural dangers, and promote commerce, but have also resulted in habitat loss and extinctions commencing in the Late Pleistocene. Ecologists and other researchers are advised to make better use of the archaeological and paleoecological data available for gaining an understanding the history of human impacts before proposing solutions. [74]

See also

Notes

  1. This Central Asian breed is ancient, dating perhaps to 1400 BCE. [28]

Related Research Articles

Agriculture Cultivation of plants and animals to provide useful products

Agriculture is the science and art of cultivating plants and livestock. Agriculture was the key development in the rise of sedentary human civilization, whereby farming of domesticated species created food surpluses that enabled people to live in cities. The history of agriculture began thousands of years ago. After gathering wild grains beginning at least 105,000 years ago, nascent farmers began to plant them around 11,500 years ago. Pigs, sheep and cattle were domesticated over 10,000 years ago. Plants were independently cultivated in at least 11 regions of the world. Industrial agriculture based on large-scale monoculture in the twentieth century came to dominate agricultural output, though about 2 billion people still depended on subsistence agriculture into the twenty-first.

Hybrid (biology) Offspring of cross-species reproduction

In biology, a hybrid is the offspring resulting from combining the qualities of two organisms of different breeds, varieties, species or genera through sexual reproduction. Hybrids are not always intermediates between their parents, but can show hybrid vigour, sometimes growing larger or taller than either parent. The concept of a hybrid is interpreted differently in animal and plant breeding, where there is interest in the individual parentage. In genetics, attention is focused on the numbers of chromosomes. In taxonomy, a key question is how closely related the parent species are.

Feral Formerly domestic animal or plant that lives in the wild

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Neolithic Revolution transition from hunter-gatherer to settled peoples in human history

The Neolithic Revolution, or the (First) Agricultural Revolution, was the wide-scale transition of many human cultures during the Neolithic period from a lifestyle of hunting and gathering to one of agriculture and settlement, making an increasingly large population possible. These settled communities permitted humans to observe and experiment with plants to learn how they grew and developed. This new knowledge led to the domestication of plants.

Landrace Infraspecific name

A landrace is a domesticated, locally adapted, traditional variety of a species of animal or plant that has developed over time, through adaptation to its natural and cultural environment of agriculture and pastoralism, and due to isolation from other populations of the species. Landraces are generally distinguished from cultivars, and from breeds in the standardized sense, although the term landrace breed is sometimes used as distinguished from the term standardized breed when referring to cattle.

Agricultural biodiversity

Agricultural biodiversity is a sub-set of general biodiversity. Otherwise known as agrobiodiversity, agricultural biodiversity is a broad term that includes "the variety and variability of animals, plants and micro-organisms at the genetic, species and ecosystem levels that sustain the ecosystem structures, functions and processes in and around production systems, and that provide food and non-food agricultural products.” managed by farmers, pastoralists, fishers and forest dwellers, agrobiodiversity provides stability, adaptability and resilience and constitutes a key element of the livelihood strategies of rural communities throughout the world. Agrobiodiversity is central to sustainable food systems and sustainable diets. The use of agricultural biodiversity can contribute to food security, nutrition security, and livelihood security, and it is critical for climate adaptation and climate mitigation.

Domestication of animals

The domestication of animals is the mutual relationship between animals and the humans who have influence on their care and reproduction. Charles Darwin recognized a small number of traits that made domesticated species different from their wild ancestors. He was also the first to recognize the difference between conscious selective breeding in which humans directly select for desirable traits, and unconscious selection where traits evolve as a by-product of natural selection or from selection on other traits. There is a genetic difference between domestic and wild populations. There is also a genetic difference between the domestication traits that researchers believe to have been essential at the early stages of domestication, and the improvement traits that have appeared since the split between wild and domestic populations. Domestication traits are generally fixed within all domesticates, and were selected during the initial episode of domestication of that animal or plant, whereas improvement traits are present only in a proportion of domesticates, though they may be fixed in individual breeds or regional populations.

Introgression, also known as introgressive hybridization, in genetics is the movement of a gene from one species into the gene pool of another by the repeated backcrossing of an interspecific hybrid with one of its parent species. Purposeful introgression is a long-term process; it may take many hybrid generations before the backcrossing occurs.

Eastern Agricultural Complex

The Eastern Agricultural Complex was one of about 10 independent centers of plant domestication in the pre-historic world. By about 1800 BCE the Native Americans of North America were cultivating several species of plants, thus transitioning from a hunter-gatherer economy to agriculture. After 200 BCE when maize from Mexico was introduced to the Eastern Woodlands, the Native Americans of the present-day United States and Canada slowly changed from growing local indigenous plants to a maize-based agricultural economy. The cultivation of local indigenous plants other than squash declined and was eventually abandoned. The formerly domesticated plants, except for squash, returned to their wild forms.

Origin of the domestic dog Aspect of history

The origin of the domestic dog includes the dog's genetic divergence from the wolf, its domestication, and its development into dog types and dog breeds. The dog is a member of the wolf-like canids and was the first species and the only large carnivore to have been domesticated. Genetic studies show that dogs and modern wolves display reciprocal monophyly, which implies that dogs are not genetically close to any living wolf population and that the wild ancestor of the dog is extinct. An extinct Late Pleistocene wolf may have been the ancestor of the dog, with the dog's similarity to the extant grey wolf being the result of genetic admixture between the two. In 2020, a literature review of canid domestication stated that modern dogs were not descended from the same Canis lineage as modern wolves, and proposes that dogs may be descended from a Pleistocene wolf closer in size to a village dog.

Genetic pollution is a controversial term for uncontrolled gene flow into wild populations. It is defined as "the dispersal of contaminated altered genes from genetically engineered organisms to natural organisms, esp. by cross-pollination", but has come to be used in some broader ways. It is related to the population genetics concept of gene flow, and genetic rescue, which is genetic material intentionally introduced to increase the fitness of a population. It is called genetic pollution when it negatively impacts on the fitness of a population, such as through outbreeding depression and the introduction of unwanted phenotypes which can lead to extinction.

Center of origin Geographical area where a group of organisms develop particular properties

A centre of origin is a geographical area where a group of organisms, either domesticated or wild, first developed its distinctive properties. They are also considered centers of diversity. Centers of origin were first identified in 1924 by Nikolai Vavilov.

Plant genetics Study of genes and heredity in plants

Plant genetics is the study of genes, genetic variation, and heredity specifically in plants. It is generally considered a field of biology and botany, but intersects frequently with many other life sciences and is strongly linked with the study of information systems. Plant genetics is similar in many ways to animal genetics but differs in a few key areas.

Plant breeding The art and science of changing the traits of plants in order to produce desired characteristics

Plant breeding is the science of changing the traits of plants in order to produce desired characteristics. It has been used to improve the quality of nutrition in products for humans and animals. The goals of plant breeding are to produce crop varieties that boast unique and superior traits for a variety of agricultural applications. The most frequently addressed traits are those related to biotic and abiotic stress tolerance, grain or biomass yield, end-use quality characteristics such as taste or the concentrations of specific biological molecules and ease of processing . Plant breeding can be accomplished through many different techniques ranging from simply selecting plants with desirable characteristics for propagation, to methods that make use of knowledge of genetics and chromosomes, to more complex molecular techniques. Genes in a plant are what determine what type of qualitative or quantitative traits it will have. Plant breeders strive to create a specific outcome of plants and potentially new plant varieties.

Plant breeding started with sedentary agriculture, particularly the domestication of the first agricultural plants, a practice which is estimated to date back 9,000 to 11,000 years. Initially, early human farmers selected food plants with particular desirable characteristics and used these as a seed source for subsequent generations, resulting in an accumulation of characteristics over time. In time however, experiments began with deliberate hybridization, the science and understanding of which was greatly enhanced by the work of Gregor Mendel. Mendel's work ultimately led to the new science of genetics. Modern plant breeding is applied genetics, but its scientific basis is broader, covering molecular biology, cytology, systematics, physiology, pathology, entomology, chemistry, and statistics (biometrics). It has also developed its own technology. Plant breeding efforts are divided into a number of different historical landmarks.

Domesticated species and the human populations that domesticate them are typified by a mutualistic relationship of interdependence, in which humans have over thousands of years modified the genomics of domesticated species. Genomics is the study of the structure, content, and evolution of genomes, or the entire genetic information of organisms. Domestication is the process by which humans alter the morphology and genes of targeted organisms by selecting for desirable traits.

History of genetic engineering

Genetic engineering is the science of manipulating genetic material of an organism. The first artificial genetic modification accomplished using biotechnology was transgenesis, the process of transferring genes from one organism to another, was first accomplished by Herbert Boyer and Stanley Cohen in 1973. It was the result of a series of advancements in techniques that allowed the direct modification of the genome. Important advances included the discovery of restriction enzymes and DNA ligases, the ability to design plasmids and technologies like polymerase chain reaction and sequencing. Transformation of the DNA into a host organism was accomplished with the invention of biolistics, Agrobacterium-mediated recombination and microinjection. The first genetically modified animal was a mouse created in 1974 by Rudolf Jaenisch. In 1976 the technology was commercialised, with the advent of genetically modified bacteria that produced somatostatin, followed by insulin in 1978. In 1983 an antibiotic resistant gene was inserted into tobacco, leading to the first genetically engineered plant. Advances followed that allowed scientists to manipulate and add genes to a variety of different organisms and induce a range of different effects. Plants were first commercialized with virus resistant tobacco released in China in 1992. The first genetically modified food was the Flavr Savr tomato marketed in 1994. By 2010, 29 countries had planted commercialized biotech crops. In 2000 a paper published in Science introduced golden rice, the first food developed with increased nutrient value.

Animal genetic resources for food and agriculture

Animal genetic resources for food and agriculture (AnGR) are a subset of genetic resources and a specific element of agricultural biodiversity. The term animal genetic resources refers specifically to the genetic resources of avian and mammalian species, which are used for food and agriculture purposes. Further terms referring to AnGR are "farm animal genetic resources" or "livestock diversity".

The domestic cat originated from Near-Eastern and Egyptian populations of the African wildcat, Felis sylvestris lybica. The family Felidae, to which all living feline species belong, arose about ten to eleven million years ago. This family is divided into eight major phylogenetic lineages. The domestic cat is a member of the Felis lineage. A number of investigations have shown that all domestic varieties of cats come from a single species of the Felis lineage, Felis catus. Variations of this lineage are found all over the world and up until recently scientists have had a hard time pinning down exactly which region gave rise to modern domestic cat breeds. Scientists believed that it was not just one incident that led to the domesticated cat but multiple, independent incidents at different places that led to these breeds. More complications arose from the fact that the wildcat population as a whole is very widespread and very similar to one another. These variations of wild cat can and will interbreed freely with one another when in close contact further blurring the lines between taxa. Recent DNA studies, advancement in genetic technologies, and a better understanding of DNA and genetics as a whole has helped make discoveries in the evolutionary history of the domestic cat.

Wild ancestors are the original species from which domesticated plants and animals are derived.

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Further reading