Butyric acid

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Butyric acid
Skeletal structure of butyric acid Butyric acid acsv.svg
Skeletal structure of butyric acid
Flat structure of butyric acid Butyric acid flat structure.png
Flat structure of butyric acid
Butyric-acid-3D-balls.png
Names
Preferred IUPAC name
Butanoic acid [1]
Other names
Ethylacetic acid
1-Propanecarboxylic acid
Propylformic acid
C4:0 (Lipid numbers)
Identifiers
3D model (JSmol)
ChEBI
ChEMBL
ChemSpider
  • Butyric acid: 259  Yes check.svgY
  • Butyrate: 94582  Yes check.svgY
DrugBank
ECHA InfoCard 100.003.212 OOjs UI icon edit-ltr-progressive.svg
EC Number
  • Butyric acid:203-532-3
KEGG
MeSH Butyric+acid
PubChem CID
RTECS number
  • Butyric acid:ES5425000
UNII
UN number 2820
  • InChI=1S/C4H8O2/c1-2-3-4(5)6/h2-3H2,1H3,(H,5,6) Yes check.svgY
    Key: FERIUCNNQQJTOY-UHFFFAOYSA-N Yes check.svgY
  • Butyric acid:InChI=1/C4H8O2/c1-2-3-4(5)6/h2-3H2,1H3,(H,5,6)
    Key: FERIUCNNQQJTOY-UHFFFAOYAP
  • Butyric acid:O=C(O)CCC
Properties
C
3
H
7
COOH
Molar mass 88.106 g·mol−1
AppearanceColorless liquid
Odor Unpleasant, similar to vomit or body odor
Density 1.135 g/cm3 (−43 °C) [2]
0.9528 g/cm3 (25 °C) [3]
Melting point −5.1 °C (22.8 °F; 268.0 K) [3]
Boiling point 163.75 °C (326.75 °F; 436.90 K) [3]
Sublimes at −35 °C
ΔsublHo = 76 kJ/mol [4]
Miscible
Solubility Miscible with ethanol, ether. Slightly soluble in CCl4
log P 0.79
Vapor pressure 0.112 kPa (20 °C)
0.74 kPa (50 °C)
9.62 kPa (100 °C) [4]
5.35·10−4 L·atm/mol
Acidity (pKa)4.82
−55.10·10−6 cm3/mol
Thermal conductivity 1.46·105 W/m·K
1.398 (20 °C) [3]
Viscosity 1.814 cP (15 °C) [5]
1.426 cP (25 °C)
Structure
Monoclinic (−43 °C) [2]
C2/m [2]
a = 8.01 Å, b = 6.82 Å, c = 10.14 Å [2]
α = 90°, β = 111.45°, γ = 90°
0.93 D (20 °C) [5]
Thermochemistry
178.6 J/mol·K [4]
Std molar
entropy
(S298)
222.2 J/mol·K [5]
−533.9 kJ/mol [4]
2183.5 kJ/mol [4]
Hazards
GHS labelling:
GHS-pictogram-acid.svg [6]
Danger
H314 [6]
P280, P305+P351+P338, P310 [6]
NFPA 704 (fire diamond)
NFPA 704.svgHealth 3: Short exposure could cause serious temporary or residual injury. E.g. chlorine gasFlammability 2: Must be moderately heated or exposed to relatively high ambient temperature before ignition can occur. Flash point between 38 and 93 °C (100 and 200 °F). E.g. diesel fuelInstability 0: Normally stable, even under fire exposure conditions, and is not reactive with water. E.g. liquid nitrogenSpecial hazards (white): no code
3
2
0
Flash point 71 to 72 °C (160 to 162 °F; 344 to 345 K) [6]
440 °C (824 °F; 713 K) [6]
Explosive limits 2.2–13.4%
Lethal dose or concentration (LD, LC):
2000 mg/kg (oral, rat)
Safety data sheet (SDS) External MSDS
Related compounds
Propionic acid, Pentanoic acid
Related compounds
1-Butanol
Butyraldehyde
Methyl butyrate
Except where otherwise noted, data are given for materials in their standard state (at 25 °C [77 °F], 100 kPa).

Butyric acid ( /ˈbjtɪrɪk/ ; from Ancient Greek : βούτῡρον, meaning "butter"), also known under the systematic name butanoic acid, is a straight-chain alkyl carboxylic acid with the chemical formula CH3CH2CH2CO2H. It is an oily, colorless liquid with an unpleasant odor. Isobutyric acid (2-methylpropanoic acid) is an isomer. Salts and esters of butyric acid are known as butyrates or butanoates. The acid does not occur widely in nature, but its esters are widespread. It is a common industrial chemical [7] and an important component in the mammalian gut.

History

Butyric acid was first observed in an impure form in 1814 by the French chemist Michel Eugène Chevreul. By 1818, he had purified it sufficiently to characterize it. However, Chevreul did not publish his early research on butyric acid; instead, he deposited his findings in manuscript form with the secretary of the Academy of Sciences in Paris, France. Henri Braconnot, a French chemist, was also researching the composition of butter and was publishing his findings and this led to disputes about priority. As early as 1815, Chevreul claimed that he had found the substance responsible for the smell of butter. [8] By 1817, he published some of his findings regarding the properties of butyric acid and named it. [9] However, it was not until 1823 that he presented the properties of butyric acid in detail. [10] The name butyric acid comes from βούτῡρον , meaning "butter", the substance in which it was first found. The Latin name butyrum (or buturum) is similar.

Occurrence

Triglycerides of butyric acid compose 3–4% of butter. When butter goes rancid, butyric acid is liberated from the glyceride by hydrolysis. [11] It is one of the fatty acid subgroup called short-chain fatty acids. Butyric acid is a typical carboxylic acid that reacts with bases and affects many metals. [12] It is found in animal fat and plant oils, bovine milk, breast milk, butter, parmesan cheese, body odor, vomit and as a product of anaerobic fermentation (including in the colon). [13] [14] It has a taste somewhat like butter and an unpleasant odor. Mammals with good scent detection abilities, such as dogs, can detect it at 10 parts per billion, whereas humans can detect it only in concentrations above 10 parts per million. In food manufacturing, it is used as a flavoring agent. [15]

In humans, butyric acid is one of two primary endogenous agonists of human hydroxycarboxylic acid receptor 2 (HCA2), a Gi/o-coupled G protein-coupled receptor. [16] [17]

Butyric acid is present as its octyl ester in parsnip (Pastinaca sativa) [18] and in the seed of the ginkgo tree. [19]

Production

Industrial

In industry, butyric acid is produced by hydroformylation from propene and syngas, forming butyraldehyde, which is oxidised to the final product. [7]

H2 + CO + CH3CH=CH2 → CH3CH2CH2CHOoxidationbutyric acid

It can be separated from aqueous solutions by saturation with salts such as calcium chloride. The calcium salt, Ca(C4H7O2)2· H2O, is less soluble in hot water than in cold.

Microbial biosynthesis

One pathway for butyrate biosynthesis. Relevant enzymes: acetoacetyl-CoA thiolase, NAD- and NADP-dependent 3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxybutyryl-CoA dehydratase, and NAD-dependent butyryl-CoA dehydrogenase. ButyrateBisyn.svg
One pathway for butyrate biosynthesis. Relevant enzymes: acetoacetyl-CoA thiolase, NAD- and NADP-dependent 3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxybutyryl-CoA dehydratase, and NAD-dependent butyryl-CoA dehydrogenase.

Butyrate is produced by several fermentation processes performed by obligate anaerobic bacteria. [20] This fermentation pathway was discovered by Louis Pasteur in 1861. Examples of butyrate-producing species of bacteria:

The pathway starts with the glycolytic cleavage of glucose to two molecules of pyruvate, as happens in most organisms. Pyruvate is oxidized into acetyl coenzyme A catalyzed by pyruvate:ferredoxin oxidoreductase. Two molecules of carbon dioxide (CO2) and two molecules of hydrogen (H2) are formed as waste products. Subsequently, ATP is produced in the last step of the fermentation. Three molecules of ATP are produced for each glucose molecule, a relatively high yield. The balanced equation for this fermentation is

C6H12O6 → C4H8O2 + 2CO2 + 2H2

Other pathways to butyrate include succinate reduction and crotonate disproportionation.

ActionResponsible enzyme
Acetyl coenzyme A converts into acetoacetyl coenzyme A acetyl-CoA-acetyl transferase
Acetoacetyl coenzyme A converts into β-hydroxybutyryl CoA β-hydroxybutyryl-CoA dehydrogenase
β-hydroxybutyryl CoA converts into crotonyl CoA crotonase
Crotonyl CoA converts into butyryl CoA (CH3CH2CH2C=O−CoA) butyryl CoA dehydrogenase
A phosphate group replaces CoA to form butyryl phosphate phosphobutyrylase
The phosphate group joins ADP to form ATP and butyrate butyrate kinase

Several species form acetone and n-butanol in an alternative pathway, which starts as butyrate fermentation. Some of these species are:

These bacteria begin with butyrate fermentation, as described above, but, when the pH drops below 5, they switch into butanol and acetone production to prevent further lowering of the pH. Two molecules of butanol are formed for each molecule of acetone.

The change in the pathway occurs after acetoacetyl CoA formation. This intermediate then takes two possible pathways:

For commercial purposes Clostridium species are used preferably for butyric acid or butanol production. The most common species used for probiotics is the Clostridium butyricum. [21]

Fermentable fiber sources

Highly-fermentable fiber residues, such as those from resistant starch, oat bran, pectin, and guar are transformed by colonic bacteria into short-chain fatty acids (SCFA) including butyrate, producing more SCFA than less fermentable fibers such as celluloses. [14] [22] One study found that resistant starch consistently produces more butyrate than other types of dietary fiber. [23] The production of SCFA from fibers in ruminant animals such as cattle is responsible for the butyrate content of milk and butter. [13] [24]

Fructans are another source of prebiotic soluble dietary fibers which can be digested to produce butyrate. [25] They are often found in the soluble fibers of foods which are high in sulfur, such as the allium and cruciferous vegetables. Sources of fructans include wheat (although some wheat strains such as spelt contain lower amounts), [26] rye, barley, onion, garlic, Jerusalem and globe artichoke, asparagus, beetroot, chicory, dandelion leaves, leek, radicchio, the white part of spring onion, broccoli, brussels sprouts, cabbage, fennel, and prebiotics, such as fructooligosaccharides (FOS), oligofructose, and inulin. [27] [28]

Reactions

Butyric acid reacts as a typical carboxylic acid: it can form amide, ester, anhydride, and chloride derivatives. [29] The latter, butyryl chloride, is commonly used as the intermediate to obtain the others.

Uses

Butyric acid is used in the preparation of various butyrate esters. It is used to produce cellulose acetate butyrate (CAB), which is used in a wide variety of tools, paints, and coatings, and is more resistant to degradation than cellulose acetate. [30] CAB can degrade with exposure to heat and moisture, releasing butyric acid. [31]

Low-molecular-weight esters of butyric acid, such as methyl butyrate, have mostly pleasant aromas or tastes. [7] As a consequence, they are used as food and perfume additives. It is an approved food flavoring in the EU FLAVIS database (number 08.005).

Due to its powerful odor, it has also been used as a fishing bait additive. [32] Many of the commercially available flavors used in carp (Cyprinus carpio) baits use butyric acid as their ester base. It is not clear whether fish are attracted by the butyric acid itself or the substances added to it. Butyric acid was one of the few organic acids shown to be palatable for both tench and bitterling. [33] The substance has been used as a stink bomb by the Sea Shepherd Conservation Society to disrupt Japanese whaling crews. [34]

Pharmacology

Human enzyme and GPCR binding [35] [36]
Inhibited enzyme IC50 (nM)Entry note
HDAC1 16,000
HDAC2 12,000
HDAC3 9,000
HDAC4 2,000,000Lower bound
HDAC5 2,000,000Lower bound
HDAC6 2,000,000Lower bound
HDAC7 2,000,000Lower bound
HDAC8 15,000
HDAC9 2,000,000Lower bound
CA1 511,000
CA2 1,032,000
GPCR target pEC50 Entry note
FFAR2 2.9–4.6Full agonist
FFAR3 3.8–4.9Full agonist
HCA2 2.8Agonist

Pharmacodynamics

Butyric acid (pKa 4.82) is fully ionized at physiological pH, so its anion is the material that is mainly relevant in biological systems. It is one of two primary endogenous agonists of human hydroxycarboxylic acid receptor 2 (HCA2, also known as GPR109A), a Gi/o-coupled G protein-coupled receptor (GPCR), [16] [17]

Like other short-chain fatty acids (SCFAs), butyrate is an agonist at the free fatty acid receptors FFAR2 and FFAR3, which function as nutrient sensors that facilitate the homeostatic control of energy balance; however, among the group of SCFAs, only butyrate is an agonist of HCA2. [37] [38] [39] It is also an HDAC inhibitor (specifically, HDAC1, HDAC2, HDAC3, and HDAC8), [35] [36] a drug that inhibits the function of histone deacetylase enzymes, thereby favoring an acetylated state of histones in cells. [39] Histone acetylation loosens the structure of chromatin by reducing the electrostatic attraction between histones and DNA. [39] In general, it is thought that transcription factors will be unable to access regions where histones are tightly associated with DNA (i.e., non-acetylated, e.g., heterochromatin).[ medical citation needed ] Therefore, butyric acid is thought to enhance the transcriptional activity at promoters, [39] which are typically silenced or downregulated due to histone deacetylase activity.

Pharmacokinetics

Butyrate that is produced in the colon through microbial fermentation of dietary fiber is primarily absorbed and metabolized by colonocytes and the liver [note 1] for the generation of ATP during energy metabolism; however, some butyrate is absorbed in the distal colon, which is not connected to the portal vein, thereby allowing for the systemic distribution of butyrate to multiple organ systems through the circulatory system. [39] [40] Butyrate that has reached systemic circulation can readily cross the blood–brain barrier via monocarboxylate transporters (i.e., certain members of the SLC16A group of transporters). [41] [42] Other transporters that mediate the passage of butyrate across lipid membranes include SLC5A8 (SMCT1), SLC27A1 (FATP1), and SLC27A4 (FATP4). [35] [42]

Metabolism

Butyric acid is metabolized by various human XM-ligases (ACSM1, ACSM2B, ASCM3, ACSM4, ACSM5, and ACSM6), also known as butyrate–CoA ligase. [43] [44] The metabolite produced by this reaction is butyryl–CoA, and is produced as follows: [43]

Adenosine triphosphate + butyric acid + coenzyme A → adenosine monophosphate + pyrophosphate + butyryl-CoA

As a short-chain fatty acid, butyrate is metabolized by mitochondria as an energy (i.e., adenosine triphosphate or ATP) source through fatty acid metabolism. [39] In particular, it is an important energy source for cells lining the mammalian colon (colonocytes). [25] Without butyrates, colon cells undergo autophagy (i.e., self-digestion) and die. [45]

In humans, the butyrate precursor tributyrin, which is naturally present in butter, is metabolized by triacylglycerol lipase into dibutyrin and butyrate through the reaction: [46]

Tributyrin + H2O → dibutyrin + butyric acid

Biochemistry

Butyrate has numerous effects on energy homeostasis and related diseases (diabetes and obesity), inflammation, and immune function (e.g., it has pronounced antimicrobial and anticarcinogenic effects) in humans. These effects occur through its metabolism by mitochondria to generate ATP during fatty acid metabolism or through one or more of its histone-modifying enzyme targets (i.e., the class I histone deacetylases) and G-protein coupled receptor targets (i.e., FFAR2, FFAR3, and HCA2). [37] [47]

In the mammalian gut

Butyrate is essential to host immune homeostasis. [37] Although the role and importance of butyrate in the gut is not fully understood, many researchers argue that a depletion of butyrate-producing bacteria in patients with several vasculitic conditions is essential to the pathogenesis of these disorders. A depletion of butyrate in the gut is typically caused by an absence or depletion of butyrate-producing-bacteria (BPB). This depletion in BPB leads to microbial dysbiosis. This is characterized by an overall low biodiversity and a depletion of key butyrate-producing members. Butyrate is an essential microbial metabolite with a vital role as a modulator of proper immune function in the host. It has been shown that children lacking in BPB are more susceptible to allergic disease [48] and Type 1 Diabetes. [49] Butyrate is also reduced in a diet low in dietary fiber, which can induce inflammation and have other adverse affects insofar as these short-chain fatty acids activate PPAR-γ. [50]

Butyrate exerts a key role for the maintenance of immune homeostasis both locally (in the gut) and systemically (via circulating butyrate). It has been shown to promote the differentiation of regulatory T cells. In particular, circulating butyrate prompts the generation of extrathymic regulatory T cells. The low-levels of butyrate in human subjects could favor reduced regulatory T cell-mediated control, thus promoting a powerful immuno-pathological T-cell response. [51] On the other hand, gut butyrate has been reported to inhibit local pro-inflammatory cytokines. The absence or depletion of these BPB in the gut could therefore be a possible aide in the overly-active inflammatory response. Butyrate in the gut also protects the integrity of the intestinal epithelial barrier. Decreased butyrate levels therefore lead to a damaged or dysfunctional intestinal epithelial barrier. [52] Butyrate reduction has also been associated with Clostridioides difficile proliferation. Conversely, a high-fiber diet results in higher butyric acid concentration and inhibition of C. difficile growth. [53]

In a 2013 research study conducted by Furusawa et al., microbe-derived butyrate was found to be essential in inducing the differentiation of colonic regulatory T cells in mice. This is of great importance and possibly relevant to the pathogenesis and vasculitis associated with many inflammatory diseases because regulatory T cells have a central role in the suppression of inflammatory and allergic responses. [54] In several research studies, it has been demonstrated that butyrate induced the differentiation of regulatory T cells in vitro and in vivo. [55] The anti-inflammatory capacity of butyrate has been extensively analyzed and supported by many studies. It has been found that microorganism-produced butyrate expedites the production of regulatory T cells, although the specific mechanism by which it does so unclear. [56] More recently, it has been shown that butyrate plays an essential and direct role in modulating gene expression of cytotoxic T-cells. [57] Butyrate also has an anti-inflammatory effect on neutrophils, reducing their migration to wounds. This effect is mediated via the receptor HCA1. [58]

In the gut microbiomes found in the class Mammalia, omnivores and herbivores have butyrate-producing bacterial communities dominated by the butyryl-CoA:acetate CoA-transferase pathway, whereas carnivores have butyrate-producing bacterial communities dominated by the butyrate kinase pathway. [59]

The odor of butyric acid, which emanates from the sebaceous follicles of all mammals, works on the tick as a signal.

Immunomodulation and inflammation

Butyrate's effects on the immune system are mediated through the inhibition of class I histone deacetylases and activation of its G-protein coupled receptor targets: HCA2 (GPR109A), FFAR2 (GPR43), and FFAR3 (GPR41). [38] [60] Among the short-chain fatty acids, butyrate is the most potent promoter of intestinal regulatory T cells in vitro and the only one among the group that is an HCA2 ligand. [38] It has been shown to be a critical mediator of the colonic inflammatory response. It possesses both preventive and therapeutic potential to counteract inflammation-mediated ulcerative colitis and colorectal cancer.

Butyrate has established antimicrobial properties in humans that are mediated through the antimicrobial peptide LL-37, which it induces via HDAC inhibition on histone H3. [60] [61] [62] In vitro, butyrate increases gene expression of FOXP3 (the transcription regulator for Tregs) and promotes colonic regulatory T cells (Tregs) through the inhibition of class I histone deacetylases; [38] [60] through these actions, it increases the expression of interleukin 10, an anti-inflammatory cytokine. [60] [38] Butyrate also suppresses colonic inflammation by inhibiting the IFN-γSTAT1 signaling pathways, which is mediated partially through histone deacetylase inhibition. While transient IFN-γ signaling is generally associated with normal host immune response, chronic IFN-γ signaling is often associated with chronic inflammation. It has been shown that butyrate inhibits activity of HDAC1 that is bound to the Fas gene promoter in T cells, resulting in hyperacetylation of the Fas promoter and up-regulation of Fas receptor on the T-cell surface. [63]

Similar to other HCA2 agonists studied, butyrate also produces marked anti-inflammatory effects in a variety of tissues, including the brain, gastrointestinal tract, skin, and vascular tissue. [64] [65] [66] Butyrate binding at FFAR3 induces neuropeptide Y release and promotes the functional homeostasis of colonic mucosa and the enteric immune system. [67]

Cancer

Butyrate has been shown to be a critical mediator of the colonic inflammatory response. It is responsible for about 70% of energy from the colonocytes, being a critical SCFA in colon homeostasis. [68] Butyrate possesses both preventive and therapeutic potential to counteract inflammation-mediated ulcerative colitis (UC) and colorectal cancer. [69] It produces different effects in healthy and cancerous cells: this is known as the "butyrate paradox". In particular, butyrate inhibits colonic tumor cells and stimulates proliferation of healthy colonic epithelial cells. [70] [71] The explanation why butyrate is an energy source for normal colonocytes and induces apoptosis in colon cancer cells, is the Warburg effect in cancer cells, which leads to butyrate not being properly metabolized. This phenomenon leads to the accumulation of butyrate in the nucleus, acting as a histone deacetylase (HDAC) inhibitor. [72] One mechanism underlying butyrate function in suppression of colonic inflammation is inhibition of the IFN-γ/STAT1 signalling pathways. It has been shown that butyrate inhibits activity of HDAC1 that is bound to the Fas gene promoter in T cells, resulting in hyperacetylation of the Fas promoter and upregulation of Fas receptor on the T cell surface. It is thus suggested that butyrate enhances apoptosis of T cells in the colonic tissue and thereby eliminates the source of inflammation (IFN-γ production). [73] Butyrate inhibits angiogenesis by inactivating Sp1 transcription factor activity and downregulating vascular endothelial growth factor gene expression. [74]

In summary, the production of volatile fatty acids such as butyrate from fermentable fibers may contribute to the role of dietary fiber in colon cancer. Short-chain fatty acids, which include butyric acid, are produced by beneficial colonic bacteria (probiotics) that feed on, or ferment prebiotics, which are plant products that contain dietary fiber. These short-chain fatty acids benefit the colonocytes by increasing energy production, and may protect against colon cancer by inhibiting cell proliferation. [22]

Conversely, some researchers have sought to eliminate butyrate and consider it a potential cancer driver. [75] Studies in mice indicate it drives transformation of MSH2-deficient colon epithelial cells. [76]

Potential treatments from butyrate restoration

Owing to the importance of butyrate as an inflammatory regulator and immune system contributor, butyrate depletions could be a key factor influencing the pathogenesis of many vasculitic conditions. It is thus essential to maintain healthy levels of butyrate in the gut. Fecal microbiota transplants (to restore BPB and symbiosis in the gut) could be effective by replenishing butyrate levels. In this treatment, a healthy individual donates their stool to be transplanted into an individual with dysbiosis. A less-invasive treatment option is the administration of butyrate—as oral supplements or enemas—which has been shown to be very effective in terminating symptoms of inflammation with minimal-to-no side-effects. In a study where patients with ulcerative colitis were treated with butyrate enemas, inflammation decreased significantly, and bleeding ceased completely after butyrate provision. [77]

Addiction

Butyric acid is an HDAC Tooltip histone deacetylase inhibitor that is selective for class I HDACs in humans. [35] HDACs are histone-modifying enzymes that can cause histone deacetylation and repression of gene expression. HDACs are important regulators of synaptic formation, synaptic plasticity, and long-term memory formation. Class I HDACs are known to be involved in mediating the development of an addiction. [78] [79] [80] Butyric acid and other HDAC inhibitors have been used in preclinical research to assess the transcriptional, neural, and behavioral effects of HDAC inhibition in animals addicted to drugs. [80] [81] [82]

Butyrate salts and esters

The butyrate or butanoate ion, C 3 H 7COO, is the conjugate base of butyric acid. It is the form found in biological systems at physiological pH. A butyric (or butanoic) compound is a carboxylate salt or ester of butyric acid.

Examples

Salts

Esters

See also

Notes

  1. Most of the butyrate that is absorbed into blood plasma from the colon enters the circulatory system via the portal vein; most of the butyrate that enters the circulatory system by this route is taken up by the liver. [39]

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<span class="mw-page-title-main">Free fatty acid receptor 3</span> Protein-coding gene in the species Homo sapiens

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Hydroxycarboxylic acid receptor 2 (HCA2), also known as GPR109A and niacin receptor 1 (NIACR1), is a protein which in humans is encoded (its formation is directed) by the HCAR2 gene and in rodents by the Hcar2 gene. The human HCAR2 gene is located on the long (i.e., "q") arm of chromosome 12 at position 24.31 (notated as 12q24.31). Like the two other hydroxycarboxylic acid receptors, HCA1 and HCA3, HCA2 is a G protein-coupled receptor (GPCR) located on the surface membrane of cells. HCA2 binds and thereby is activated by D-β-hydroxybutyric acid (hereafter termed β-hydroxybutyric acid), butyric acid, and niacin (also known as nicotinic acid). β-Hydroxybutyric and butyric acids are regarded as the endogenous agents that activate HCA2. Under normal conditions, niacin's blood levels are too low to do so: it is given as a drug in high doses in order to reach levels that activate HCA2.

<span class="mw-page-title-main">Butyrate kinase</span> Class of enzymes

In enzymology, a butyrate kinase is an enzyme that catalyzes the chemical reaction

<span class="mw-page-title-main">Sodium-coupled monocarboxylate transporter 1</span> Protein-coding gene in the species Homo sapiens

Sodium-coupled monocarboxylate transporter 1 (i.e., SMCT1) and sodium-coupled monocarboxylate transporter 2 (i.e., SMCT2) are plasma membrane transport proteins in the solute carrier family. They transport sodium cations in association with the anionic forms (see conjugated base) of certain short-chain fatty acids (i.e., SC-FAs) through the plasma membrane from the outside to the inside of cells. For example, propionic acid (i.e., CH
3
CH
2
CO
2
H
) in its anionic "propionate" form (i.e., CH
3
CH
2
CO
2
) along with sodium cations (i.e., Na+) are co-transported from the extracellular fluid into a SMCT1-epxressing cell's cytoplasm. Monocarboxylate transporters (MCTs) are also transport proteins in the solute carrier family. They co-transport the anionic forms of various compounds into cells in association with proton cations (i.e. H+). Four of the 14 MCTs, i.e. SLC16A1 (i.e., MCT1), SLC16A7 (i.e., MCT22), SLC16A8 (i.e., MCT3), and SLC16A3 (i.e., MCT4), transport some of the same SC-FAs anions that the SMCTs transport into cells. SC-FAs do diffuse into cells independently of transport proteins but at the levels normally occurring in tissues far greater amounts of the SC-FAs are brought into cells that express a SC-FA transporter.

<span class="mw-page-title-main">Microbial symbiosis and immunity</span>

Long-term close-knit interactions between symbiotic microbes and their host can alter host immune system responses to other microorganisms, including pathogens, and are required to maintain proper homeostasis. The immune system is a host defense system consisting of anatomical physical barriers as well as physiological and cellular responses, which protect the host against harmful microorganisms while limiting host responses to harmless symbionts. Humans are home to 1013 to 1014 bacteria, roughly equivalent to the number of human cells, and while these bacteria can be pathogenic to their host most of them are mutually beneficial to both the host and bacteria.

Faecalibacterium is a genus of bacteria. The genus contains several species including Faecalibacterium prausnitzii, Faecalibacterium butyricigenerans, Faecalibacterium longum, Faecalibacterium duncaniae, Faecalibacterium hattorii, and Faecalibacterium gallinarum. Its first known species, Faecalibacterium prausnitzii is gram-positive, mesophilic, rod-shaped, and anaerobic, and is one of the most abundant and important commensal bacteria of the human gut microbiota. It is non-spore forming and non-motile. These bacteria produce butyrate and other short-chain fatty acids through the fermentation of dietary fiber. The production of butyrate makes them an important member of the gut microbiota, fighting against inflammation.

<span class="mw-page-title-main">Sodium butyrate</span> Chemical compound

Sodium butyrate is a compound with formula Na(C3H7COO). It is the sodium salt of butyric acid. It has various effects on cultured mammalian cells including inhibition of proliferation, induction of differentiation and induction or repression of gene expression. As such, it can be used in lab to bring about any of these effects. Specifically, butyrate treatment of cells results in histone hyperacetylation, and butyrate itself inhibits class I histone deacetylase (HDAC) activity, specifically HDAC1, HDAC2, HDAC3, and butyrate can be used in determining histone deacetylene in chromatin structure and function. Inhibition of HDAC activity is estimated to affect the expression of only 2% of mammalian genes.

<span class="mw-page-title-main">Gut–brain axis</span> Biochemical signaling between the gastrointestinal tract and the central nervous system

The gut–brain axis is the two-way biochemical signaling that takes place between the gastrointestinal tract and the central nervous system (CNS). The term "microbiota–gut–brain axis" highlights the role of gut microbiota in these biochemical signaling. Broadly defined, the gut–brain axis includes the central nervous system, neuroendocrine system, neuroimmune systems, the hypothalamic–pituitary–adrenal axis, sympathetic and parasympathetic arms of the autonomic nervous system, the enteric nervous system, vagus nerve, and the gut microbiota.

<i>Bacteroides thetaiotaomicron</i> Species of bacterium

Bacteroides thetaiotaomicron is a Gram-negative, obligate anaerobic bacterium and a prominent member of the human gut microbiota, particularly within the large intestine. B. thetaiotaomicron belongs to the Bacteroides genus – a group that is known for its role in the complex microbial community of the gut microbiota. Its proteome, consisting of 4,779 members, includes a system for obtaining and breaking down dietary polysaccharides that would otherwise be difficult to digest for the human body.

Butyrate fermentation is a process that produces butyric acid via anaerobic bacteria. This process occurs commonly in clostridia which can be isolated from many anaerobic environments such as mud, fermented foods, and intestinal tracts or feces. Clostridium can ferment carbohydrates into butyric acid, producing byproducts including hydrogen gas, carbon dioxide, and acetate. Butyrate fermentation is currently being utilized in the production of a variety of biochemicals and biofuels.

References

Wikisource-logo.svg This article incorporates text from a publication now in the public domain :  Chisholm, Hugh, ed. (1911). "Butyric Acid". Encyclopædia Britannica (11th ed.). Cambridge University Press.

  1. "Applications to Specific Classes of Compounds". Nomenclature of Organic Chemistry : IUPAC Recommendations and Preferred Names 2013 (Blue Book). Cambridge: The Royal Society of Chemistry. 2014. p. 746. doi:10.1039/9781849733069-00648. ISBN   978-0-85404-182-4.
  2. 1 2 3 4 Strieter FJ, Templeton DH (1962). "Crystal structure of butyric acid" (PDF). Acta Crystallographica. 15 (12): 1240–1244. Bibcode:1962AcCry..15.1240S. doi:10.1107/S0365110X6200328X.
  3. 1 2 3 4 Lide, David R., ed. (2009). CRC Handbook of Chemistry and Physics (90th ed.). Boca Raton, Florida: CRC Press. ISBN   978-1-4200-9084-0.
  4. 1 2 3 4 5 Butanoic acid in Linstrom, Peter J.; Mallard, William G. (eds.); NIST Chemistry WebBook, NIST Standard Reference Database Number 69, National Institute of Standards and Technology, Gaithersburg (MD) (retrieved 27 October 2020)
  5. 1 2 3 "Butanoic acid". Chemister.ru. 19 March 2007. Retrieved 27 October 2020.
  6. 1 2 3 4 5 Sigma-Aldrich Co., Butyric acid. Retrieved on 27 October 2020.
  7. 1 2 3 Riemenschneider, Wilhelm (2002). "Carboxylic Acids, Aliphatic". Ullmann's Encyclopedia of Industrial Chemistry . Weinheim: Wiley-VCH. doi:10.1002/14356007.a05_235. ISBN   978-3527306732.
  8. Chevreul (1815) "Lettre de M. Chevreul à MM. les rédacteurs des Annales de chimie" (Letter from Mr. Chevreul to the editors of the Annals of Chemistry), Annales de chimie, 94 : 73–79; in a footnote spanning pages 75–76, he mentions that he had found a substance that is responsible for the smell of butter.
  9. Chevreul (1817) "Extrait d'une lettre de M. Chevreul à MM. les Rédacteurs du Journal de Pharmacie" (Extract of a letter from Mr. Chevreul to the editors of the Journal of Pharmacy), Journal de Pharmacie et des sciences accessoires, 3 : 79–81. On p. 81, he named butyric acid: "Ce principe, que j'ai appelé depuis acid butérique, … " (This principle [i.e., constituent], which I have since named "butyric acid", … )
  10. E. Chevreul, Recherches chimiques sur les corps gras d'origine animale [Chemical researches on fatty substances of animal origin] (Paris, France: F.G. Levrault, 1823), pages 115–133.
  11. Woo, A.H.; Lindsay, R.C. (1983). "Stepwise Discriminant Analysis of Free Fatty Acid Profiles for Identifying Sources of Lipolytic Enzymes in Rancid Butter". Journal of Dairy Science. 66 (10): 2070–2075. doi: 10.3168/jds.S0022-0302(83)82052-9 .
  12. ICSC 1334 – Butyric acid. Inchem.org (23 November 1998). Retrieved on 2020-10-27.
  13. 1 2 McNabney, S. M.; Henagan, T. M. (2017). "Short Chain Fatty Acids in the Colon and Peripheral Tissues: A Focus on Butyrate, Colon Cancer, Obesity and Insulin Resistance". Nutrients. 9 (12): 1348. doi: 10.3390/nu9121348 . PMC   5748798 . PMID   29231905.
  14. 1 2 Morrison, D. J.; Preston, T. (2016). "Formation of short chain fatty acids by the gut microbiota and their impact on human metabolism". Gut Microbes. 7 (3): 189–200. doi:10.1080/19490976.2015.1134082. PMC   4939913 . PMID   26963409.
  15. "Butyric acid". The Good Scents Company. Retrieved 26 October 2020.
  16. 1 2 Offermanns S, Colletti SL, Lovenberg TW, Semple G, Wise A, IJzerman AP (June 2011). "International Union of Basic and Clinical Pharmacology. LXXXII: Nomenclature and Classification of Hydroxy-carboxylic Acid Receptors (GPR81, GPR109A, and GPR109B)". Pharmacological Reviews. 63 (2): 269–90. doi: 10.1124/pr.110.003301 . PMID   21454438.
  17. 1 2 Offermanns S, Colletti SL, IJzerman AP, Lovenberg TW, Semple G, Wise A, Waters MG. "Hydroxycarboxylic acid receptors". IUPHAR/BPS Guide to Pharmacology. International Union of Basic and Clinical Pharmacology. Retrieved 13 July 2018.
  18. Carroll, Mark J.; Berenbaum, May R. (2002). "Behavioral responses of the parsnip webworm to host plant volatiles". Journal of Chemical Ecology. 28 (11): 2191–2201. Bibcode:2002JCEco..28.2191C. doi:10.1023/A:1021093114663. PMID   12523562. S2CID   23512190.
  19. Raven, Peter H.; Evert, Ray F.; Eichhorn, Susan E. (2005). Biology of Plants . W. H. Freemanand Company. pp.  429–431. ISBN   978-0-7167-1007-3 . Retrieved 11 October 2018.
  20. Seedorf, H.; Fricke, W. F.; Veith, B.; Bruggemann, H.; Liesegang, H.; Strittmatter, A.; Miethke, M.; Buckel, W.; Hinderberger, J.; Li, F.; Hagemeier, C.; Thauer, R. K.; Gottschalk, G. (2008). "The Genome of Clostridium kluyveri, a Strict Anaerobe with Unique Metabolic Features". Proceedings of the National Academy of Sciences. 105 (6): 2128–2133. Bibcode:2008PNAS..105.2128S. doi: 10.1073/pnas.0711093105 . PMC   2542871 . PMID   18218779.
  21. Zigová, Jana; Šturdı́k, Ernest; Vandák, Dušan; Schlosser, Štefan (October 1999). "Butyric acid production by Clostridium butyricum with integrated extraction and pertraction". Process Biochemistry. 34 (8): 835–843. doi:10.1016/S0032-9592(99)00007-2.
  22. 1 2 Lupton JR (February 2004). "Microbial degradation products influence colon cancer risk: the butyrate controversy". The Journal of Nutrition. 134 (2): 479–82. doi: 10.1093/jn/134.2.479 . PMID   14747692.
  23. Cummings JH, Macfarlane GT, Englyst HN (February 2001). "Prebiotic digestion and fermentation". The American Journal of Clinical Nutrition. 73 (2 Suppl): 415S–420S. doi: 10.1093/ajcn/73.2.415s . PMID   11157351.
  24. Grummer RR (September 1991). "Effect of feed on the composition of milk fat". Journal of Dairy Science. 74 (9): 3244–57. doi: 10.3168/jds.S0022-0302(91)78510-X . PMID   1779073.
  25. 1 2 Rivière, Audrey; Selak, Marija; Lantin, David; Leroy, Frédéric; De Vuyst, Luc (2016). "Bifidobacteria and Butyrate-Producing Colon Bacteria: Importance and Strategies for Their Stimulation in the Human Gut". Frontiers in Microbiology. 7: 979. doi: 10.3389/fmicb.2016.00979 . PMC   4923077 . PMID   27446020.
  26. "Frequently asked questions in the area of diet and IBS". Department of Gastroenterology Translational Nutrition Science, Monash University, Victoria, Australia. Retrieved 24 March 2016.
  27. Gibson, Peter R.; Shepherd, Susan J. (1 February 2010). "Evidence-based dietary management of functional gastrointestinal symptoms: The FODMAP approach". Journal of Gastroenterology and Hepatology. 25 (2): 252–258. doi: 10.1111/j.1440-1746.2009.06149.x . ISSN   1440-1746. PMID   20136989. S2CID   20666740.
  28. Gibson, Peter R.; Varney, Jane; Malakar, Sreepurna; Muir, Jane G. (1 May 2015). "Food components and irritable bowel syndrome". Gastroenterology. 148 (6): 1158–1174.e4. doi: 10.1053/j.gastro.2015.02.005 . ISSN   1528-0012. PMID   25680668.
  29. Jenkins, P. R. (1985). "Carboxylic acids and derivatives". General and Synthetic Methods. Vol. 7. pp. 96–160. doi:10.1039/9781847556196-00096. ISBN   978-0-85186-884-4.
  30. Lokensgard, Erik (2015). Industrial Plastics: Theory and Applications (6th ed.). Cengage Learning.
  31. Williams, R. Scott. "Care of Plastics: Malignant plastics". WAAC Newsletter. Vol. 24, no. 1. Conservation OnLine. Retrieved 29 May 2017.
  32. Freezer Baits Archived 25 January 2010 at the Wayback Machine , nutrabaits.net
  33. Kasumyan A, Døving K (2003). "Taste preferences in fishes". Fish and Fisheries. 4 (4): 289–347. Bibcode:2003AqFF....4..289K. doi:10.1046/j.1467-2979.2003.00121.x.
  34. Japanese Whalers Injured by Acid-Firing Activists Archived 8 June 2010 at the Wayback Machine , newser.com, 10 February 2010
  35. 1 2 3 4 "Butyric acid". IUPHAR/BPS Guide to Pharmacology. International Union of Basic and Clinical Pharmacology. Retrieved 13 July 2018.
  36. 1 2 "Butanoic acid and Sodium butyrate". BindingDB. The Binding Database. Retrieved 27 October 2020.
  37. 1 2 3 Kasubuchi M, Hasegawa S, Hiramatsu T, Ichimura A, Kimura I (2015). "Dietary gut microbial metabolites, short-chain fatty acids, and host metabolic regulation". Nutrients. 7 (4): 2839–49. doi: 10.3390/nu7042839 . PMC   4425176 . PMID   25875123. Short-chain fatty acids (SCFAs) such as acetate, butyrate, and propionate, which are produced by gut microbial fermentation of dietary fiber, are recognized as essential host energy sources and act as signal transduction molecules via G-protein coupled receptors (FFAR2, FFAR3, OLFR78, GPR109A) and as epigenetic regulators of gene expression by the inhibition of histone deacetylase (HDAC). Recent evidence suggests that dietary fiber and the gut microbial-derived SCFAs exert multiple beneficial effects on the host energy metabolism not only by improving the intestinal environment, but also by directly affecting various host peripheral tissues.
  38. 1 2 3 4 5 Hoeppli RE, Wu D, Cook L, Levings MK (February 2015). "The environment of regulatory T cell biology: cytokines, metabolites, and the microbiome". Front Immunol. 6: 61. doi: 10.3389/fimmu.2015.00061 . PMC   4332351 . PMID   25741338.
    Figure 1: Microbial-derived molecules promote colonic Treg differentiation.
  39. 1 2 3 4 5 6 7 Bourassa MW, Alim I, Bultman SJ, Ratan RR (June 2016). "Butyrate, neuroepigenetics and the gut microbiome: Can a high fiber diet improve brain health?". Neurosci. Lett. 625: 56–63. doi:10.1016/j.neulet.2016.02.009. PMC   4903954 . PMID   26868600.
  40. van Hoogdalem, Edward; de Boer, Albertus G.; Breimer, Douwe D. (July 1991). "Pharmacokinetics of rectal drug administration, Part I. General considerations and clinical applications of centrally acting drugs". Clinical Pharmacokinetics. 21 (1): 14. doi:10.2165/00003088-199121010-00002. ISSN   0312-5963. PMID   1717195 . Retrieved 18 March 2024. the middle and inferior rectal veins drain the lower part of the rectum and venous blood is returned to the inferior vena cava. Therefore, drugs absorbed in the latter system will be delivered preferentially to the systemic circulation, bypassing the liver and avoiding first-pass metabolism
  41. Tsuji A (2005). "Small molecular drug transfer across the blood–brain barrier via carrier-mediated transport systems". NeuroRx. 2 (1): 54–62. doi:10.1602/neurorx.2.1.54. PMC   539320 . PMID   15717057. Other in vivo studies in our laboratories indicated that several compounds including acetate, propionate, butyrate, benzoic acid, salicylic acid, nicotinic acid, and some β-lactam antibiotics may be transported by the MCT at the BBB.21 ... Uptake of valproic acid was reduced in the presence of medium-chain fatty acids such as hexanoate, octanoate, and decanoate, but not propionate or butyrate, indicating that valproic acid is taken up into the brain via a transport system for medium-chain fatty acids, not short-chain fatty acids.
  42. 1 2 Vijay N, Morris ME (2014). "Role of monocarboxylate transporters in drug delivery to the brain". Curr. Pharm. Des. 20 (10): 1487–98. doi:10.2174/13816128113199990462. PMC   4084603 . PMID   23789956. Monocarboxylate transporters (MCTs) are known to mediate the transport of short chain monocarboxylates such as lactate, pyruvate and butyrate. ... MCT1 and MCT4 have also been associated with the transport of short chain fatty acids such as acetate and formate which are then metabolized in the astrocytes [78]. ... SLC5A8 is expressed in normal colon tissue, and it functions as a tumor suppressor in human colon with silencing of this gene occurring in colon carcinoma. This transporter is involved in the concentrative uptake of butyrate and pyruvate produced as a product of fermentation by colonic bacteria.
  43. 1 2 Butyric acid. University of Alberta. Retrieved 15 August 2015.{{cite encyclopedia}}: |website= ignored (help)
  44. "Butanoate metabolism – Reference pathway". Kyoto Encyclopedia of Genes and Genomes. Kanehisa Laboratories. 1 November 2017. Retrieved 1 February 2018.
  45. Donohoe, Dallas R.; Garge, Nikhil; Zhang, Xinxin; Sun, Wei; O'Connell, Thomas M.; Bunger, Maureen K.; Bultman, Scott J. (4 May 2011). "The Microbiome and Butyrate Regulate Energy Metabolism and Autophagy in the Mammalian Colon". Cell Metabolism. 13 (5): 517–526. doi:10.1016/j.cmet.2011.02.018. ISSN   1550-4131. PMC   3099420 . PMID   21531334.
  46. "triacylglycerol lipase – Homo sapiens". BRENDA. Technische Universität Braunschweig. Retrieved 25 May 2015.
  47. Tilg H, Moschen AR (September 2014). "Microbiota and diabetes: an evolving relationship". Gut. 63 (9): 1513–1521. doi:10.1136/gutjnl-2014-306928. PMID   24833634. S2CID   22633025.
  48. Cait, Alissa; Cardenas, Erick (December 2019). "Reduced genetic potential for butyrate fermentation in the gut microbiome of infants who develop allergic sensitization". Journal of Allergy and Clinical Immunology. 144 (6): 1638–1647. E3. doi: 10.1016/j.jaci.2019.06.029 . PMID   31279007.
  49. Vatanen, T.; Franzosa, E.A.; Schwager, R.; et al. (2018). "The human gut microbiome in early-onset type 1 diabetes from the TEDDY study". Nature. 562 (7728): 589–594. Bibcode:2018Natur.562..589V. doi: 10.1038/s41586-018-0620-2 . PMC   6296767 . PMID   30356183.
  50. Kumar J, Rani K, Datt C (2020). "Molecular link between dietary fibre, gut microbiota and health". Molecular Biology Reports . 47 (8): 6229–6237. doi:10.1007/s11033-020-05611-3. PMID   32623619. S2CID   220337072.
  51. Consolandi, Clarissa; Turroni, Silvia; Emmi, Giacomo; et al. (April 2015). "Behçet's syndrome patients exhibit specific microbiome signature". Autoimmunity Reviews. 14 (4): 269–276. doi: 10.1016/j.autrev.2014.11.009 . hdl: 2158/962790 . PMID   25435420.
  52. Ye, Zi; Zhang, Ni; Wu, Chunyan; et al. (4 August 2018). "A metagenomic study of the gut microbiome in Behcet's disease". Microbiome. 6 (1): 135. doi: 10.1186/s40168-018-0520-6 . PMC   6091101 . PMID   30077182.
  53. Di Bella, Stefano; Sanson, Gianfranco; Monticelli, Jacopo; Zerbato, Verena; Principe, Luigi; Giuffrè, Mauro; Pipitone, Giuseppe; Luzzati, Roberto (29 February 2024). Staley, Christopher (ed.). "Clostridioides difficile infection: history, epidemiology, risk factors, prevention, clinical manifestations, treatment, and future options". Clinical Microbiology Reviews. 37 (2). Mayuresh Abhyankar: e0013523. doi:10.1128/cmr.00135-23. ISSN   0893-8512. PMC  11324037. PMID   38421181.
  54. Cait, Alissa; Hughes, Michael R (May 2018). "Microbiome-driven allergic lung inflammation is ameliorated by short chain fatty acids". Mucosal Immunology. 11 (3): 785–796. doi: 10.1038/mi.2017.75 . PMID   29067994.
  55. Furusawa, Yukihiro; Obata, Yuuki; Fukuda, Shinji; et al. (13 November 2013). "Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells". Nature. 504 (7480): 446–450. Bibcode:2013Natur.504..446F. doi:10.1038/nature12721. PMID   24226770. S2CID   4408815.
  56. Arpaia, Nicholas; Campbell, Clarissa; Fan, Xiying; et al. (13 November 2013). "Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation". Nature. 504 (7480): 451–455. Bibcode:2013Natur.504..451A. doi:10.1038/nature12726. PMC   3869884 . PMID   24226773.
  57. Luu, Maik; Weigand, Katharina; Wedi, Fatana; et al. (26 September 2018). "Regulation of the effector function of CD8+ T cells by gut microbiota-derived metabolite butyrate". Scientific Reports. 8 (1): 14430. Bibcode:2018NatSR...814430L. doi:10.1038/s41598-018-32860-x. PMC   6158259 . PMID   30258117.
  58. Cholan, Pradeep Manuneedhi; Han, Alvin; Woodie, Brad R.; Watchon, Maxinne; Kurz, Angela RM; Laird, Angela S.; Britton, Warwick J.; Ye, Lihua; Holmes, Zachary C.; McCann, Jessica R.; David, Lawrence A. (9 November 2020). "Conserved anti-inflammatory effects and sensing of butyrate in zebrafish". Gut Microbes. 12 (1): 1–11. doi:10.1080/19490976.2020.1824563. ISSN   1949-0976. PMC   7575005 . PMID   33064972.
  59. Vital, Marius; Gao, Jiarong; Rizzo, Mike; Harrison, Tara; Tiedje, James M. (2015). "Diet is a major factor governing the fecal butyrate-producing community structure across Mammalia, Aves and Reptilia". The ISME Journal. 9 (4): 832–843. Bibcode:2015ISMEJ...9..832V. doi:10.1038/ismej.2014.179. PMC   4817703 . PMID   25343515.
  60. 1 2 3 4 Wang G (2014). "Human antimicrobial peptides and proteins". Pharmaceuticals. 7 (5): 545–94. doi: 10.3390/ph7050545 . PMC   4035769 . PMID   24828484.
    Table 3: Select human antimicrobial peptides and their proposed targets
    Table 4: Some known factors that induce antimicrobial peptide expression
  61. Yonezawa H, Osaki T, Hanawa T, Kurata S, Zaman C, Woo TD, Takahashi M, Matsubara S, Kawakami H, Ochiai K, Kamiya S (2012). "Destructive effects of butyrate on the cell envelope of Helicobacter pylori". J. Med. Microbiol. 61 (Pt 4): 582–9. doi:10.1099/jmm.0.039040-0. PMID   22194341.
  62. McGee DJ, George AE, Trainor EA, Horton KE, Hildebrandt E, Testerman TL (2011). "Cholesterol enhances Helicobacter pylori resistance to antibiotics and LL-37". Antimicrob. Agents Chemother. 55 (6): 2897–904. doi:10.1128/AAC.00016-11. PMC   3101455 . PMID   21464244.
  63. Zimmerman MA, Singh N, Martin PM, Thangaraju M, Ganapathy V, Waller JL, Shi H, Robertson KD, Munn DH, Liu K (2012). "Butyrate suppresses colonic inflammation through HDAC1-dependent Fas upregulation and Fas-mediated apoptosis of T cells". Am. J. Physiol. Gastrointest. Liver Physiol. 302 (12): G1405–15. doi:10.1152/ajpgi.00543.2011. PMC   3378095 . PMID   22517765.
  64. Offermanns S, Schwaninger M (2015). "Nutritional or pharmacological activation of HCA(2) ameliorates neuroinflammation". Trends Mol Med. 21 (4): 245–255. doi:10.1016/j.molmed.2015.02.002. PMID   25766751.
  65. Chai JT, Digby JE, Choudhury RP (May 2013). "GPR109A and vascular inflammation". Curr Atheroscler Rep. 15 (5): 325. doi:10.1007/s11883-013-0325-9. PMC   3631117 . PMID   23526298.
  66. Graff EC, Fang H, Wanders D, Judd RL (February 2016). "Anti-inflammatory effects of the hydroxycarboxylic acid receptor 2". Metab. Clin. Exp. 65 (2): 102–113. doi:10.1016/j.metabol.2015.10.001. PMID   26773933.
  67. Farzi A, Reichmann F, Holzer P (2015). "The homeostatic role of neuropeptide Y in immune function and its impact on mood and behaviour". Acta Physiol (Oxf). 213 (3): 603–27. doi:10.1111/apha.12445. PMC   4353849 . PMID   25545642.
  68. Zeng, Huawei; Lazarova, DL; Bordonaro, M (2014). "Mechanisms linking dietary fiber, gut microbiota and colon cancer prevention". World Journal of Gastrointestinal Oncology. 6 (2): 41–51. doi: 10.4251/wjgo.v6.i2.41 . PMC   3926973 . PMID   24567795.
  69. Chen, Jiezhong; Zhao, Kong-Nan; Vitetta, Luis (2019). "Effects of Intestinal Microbial–Elaborated Butyrate on Oncogenic Signaling Pathways" (pdf). Nutrients. 11 (5): 1026. doi: 10.3390/nu11051026 . PMC   6566851 . PMID   31067776. S2CID   148568580.
  70. Klampfer L, Huang J, Sasazuki T, Shirasawa S, Augenlicht L (August 2004). "Oncogenic Ras promotes butyrate-induced apoptosis through inhibition of gelsolin expression". The Journal of Biological Chemistry. 279 (35): 36680–8. doi: 10.1074/jbc.M405197200 . PMID   15213223.
  71. Vanhoutvin SA, Troost FJ, Hamer HM, Lindsey PJ, Koek GH, Jonkers DM, Kodde A, Venema K, Brummer RJ (2009). Bereswill S (ed.). "Butyrate-induced transcriptional changes in human colonic mucosa". PLOS ONE. 4 (8): e6759. Bibcode:2009PLoSO...4.6759V. doi: 10.1371/journal.pone.0006759 . PMC   2727000 . PMID   19707587.
  72. Encarnação, J. C.; Abrantes, A. M.; Pires, A. S.; et al. (30 July 2015). "Revisit dietary fiber on colorectal cancer: butyrate and its role on prevention and treatment". Cancer and Metastasis Reviews. 34 (3): 465–478. doi:10.1007/s10555-015-9578-9. PMID   26224132. S2CID   18573671.
  73. Zimmerman, Mary A.; Singh, Nagendra; Martin, Pamela M.; et al. (15 June 2012). "Butyrate suppresses colonic inflammation through HDAC1-dependent Fas upregulation and Fas-mediated apoptosis of T cells". American Journal of Physiology. Gastrointestinal and Liver Physiology. 302 (12): G1405–G1415. doi:10.1152/ajpgi.00543.2011. PMC   3378095 . PMID   22517765.
  74. Prasanna Kumar, S.; Thippeswamy, G.; Sheela, M.L.; et al. (October 2008). "Butyrate-induced phosphatase regulates VEGF and angiogenesis via Sp1". Archives of Biochemistry and Biophysics. 478 (1): 85–95. doi:10.1016/j.abb.2008.07.004. PMID   18655767.
  75. "Low-carb diet cuts risk of colon cancer, study finds | University of Toronto Media Room". media.utoronto.ca. Retrieved 4 May 2016.
  76. Belcheva, Antoaneta; Irrazabal, Thergiory; Robertson, Susan J.; Streutker, Catherine; Maughan, Heather; Rubino, Stephen; Moriyama, Eduardo H.; Copeland, Julia K.; Kumar, Sachin (17 July 2014). "Gut microbial metabolism drives transformation of MSH2-deficient colon epithelial cells". Cell. 158 (2): 288–299. doi: 10.1016/j.cell.2014.04.051 . ISSN   1097-4172. PMID   25036629.
  77. Scheppach, W.; Sommer, H.; Kirchner, T.; et al. (1992). "Effect of butyrate enemas on the colonic mucosa in distal ulcerative colitis". Gastroenterology. 103 (1): 51–56. doi: 10.1016/0016-5085(92)91094-K . PMID   1612357.
  78. Robison AJ, Nestler EJ (November 2011). "Transcriptional and epigenetic mechanisms of addiction". Nat. Rev. Neurosci. 12 (11): 623–637. doi:10.1038/nrn3111. PMC   3272277 . PMID   21989194.
  79. Nestler EJ (January 2014). "Epigenetic mechanisms of drug addiction". Neuropharmacology. 76 Pt B: 259–268. doi:10.1016/j.neuropharm.2013.04.004. PMC   3766384 . PMID   23643695.
  80. 1 2 Walker DM, Cates HM, Heller EA, Nestler EJ (February 2015). "Regulation of chromatin states by drugs of abuse". Curr. Opin. Neurobiol. 30: 112–121. doi:10.1016/j.conb.2014.11.002. PMC   4293340 . PMID   25486626.
  81. Ajonijebu DC, Abboussi O, Russell VA, Mabandla MV, Daniels WM (August 2017). "Epigenetics: a link between addiction and social environment". Cellular and Molecular Life Sciences. 74 (15): 2735–2747. doi:10.1007/s00018-017-2493-1. PMC   11107568 . PMID   28255755. S2CID   40791780.
  82. Legastelois R, Jeanblanc J, Vilpoux C, Bourguet E, Naassila M (2017). "Mécanismes épigénétiques et troubles de l'usage d'alcool : une cible thérapeutique intéressante?" [Epigenetic mechanisms and alcohol use disorders: a potential therapeutic target]. Biologie Aujourd'hui (in French). 211 (1): 83–91. doi: 10.1051/jbio/2017014 . PMID   28682229.