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Arabidopsis thaliana, the thale cress, mouse-ear cress or arabidopsis, is a small plant from the mustard family (Brassicaceae), native to Eurasia and Africa. Commonly found along the shoulders of roads and in disturbed land, it is generally considered a weed.
In physiology, transduction is the translation of arriving stimulus into an action potential by a sensory receptor. It begins when stimulus changes the membrane potential of a receptor cell.
Amyloplasts are a type of plastid, double-enveloped organelles in plant cells that are involved in various biological pathways. Amyloplasts are specifically a type of leucoplast, a subcategory for colorless, non-pigment-containing plastids. Amyloplasts are found in roots and storage tissues, and they store and synthesize starch for the plant through the polymerization of glucose. Starch synthesis relies on the transportation of carbon from the cytosol, the mechanism by which is currently under debate.
Photopigments are unstable pigments that undergo a chemical change when they absorb light. The term is generally applied to the non-protein chromophore moiety of photosensitive chromoproteins, such as the pigments involved in photosynthesis and photoreception. In medical terminology, "photopigment" commonly refers to the photoreceptor proteins of the retina.
In developmental biology, photomorphogenesis is light-mediated development, where plant growth patterns respond to the light spectrum. This is a completely separate process from photosynthesis where light is used as a source of energy. Phytochromes, cryptochromes, and phototropins are photochromic sensory receptors that restrict the photomorphogenic effect of light to the UV-A, UV-B, blue, and red portions of the electromagnetic spectrum.
Photoperiodism is the physiological reaction of organisms to the length of night or a dark period. It occurs in plants and animals. Plant photoperiodism can also be defined as the developmental responses of plants to the relative lengths of light and dark periods. They are classified under three groups according to the photoperiods: short-day plants, long-day plants, and day-neutral plants.
Cryptochromes are a class of flavoproteins found in plants and animals that are sensitive to blue light. They are involved in the circadian rhythms and the sensing of magnetic fields in a number of species. The name cryptochrome was proposed as a portmanteau combining the chromatic nature of the photoreceptor, and the cryptogamic organisms on which many blue-light studies were carried out.
Guard cells are specialized plant cells in the epidermis of leaves, stems and other organs that are used to control gas exchange. They are produced in pairs with a gap between them that forms a stomatal pore. The stomatal pores are largest when water is freely available and the guard cells turgid, and closed when water availability is critically low and the guard cells become flaccid. Photosynthesis depends on the diffusion of carbon dioxide (CO2) from the air through the stomata into the mesophyll tissues. Oxygen (O2), produced as a byproduct of photosynthesis, exits the plant via the stomata. When the stomata are open, water is lost by evaporation and must be replaced via the transpiration stream, with water taken up by the roots. Plants must balance the amount of CO2 absorbed from the air with the water loss through the stomatal pores, and this is achieved by both active and passive control of guard cell turgor pressure and stomatal pore size.
Photoreceptor proteins are light-sensitive proteins involved in the sensing and response to light in a variety of organisms. Some examples are rhodopsin in the photoreceptor cells of the vertebrate retina, phytochrome in plants, and bacteriorhodopsin and bacteriophytochromes in some bacteria. They mediate light responses as varied as visual perception, phototropism and phototaxis, as well as responses to light-dark cycles such as circadian rhythm and other photoperiodisms including control of flowering times in plants and mating seasons in animals.
In biology, phototropism is the growth of an organism in response to a light stimulus. Phototropism is most often observed in plants, but can also occur in other organisms such as fungi. The cells on the plant that are farthest from the light contain a hormone called auxin that reacts when phototropism occurs. This causes the plant to have elongated cells on the furthest side from the light. Phototropism is one of the many plant tropisms, or movements, which respond to external stimuli. Growth towards a light source is called positive phototropism, while growth away from light is called negative phototropism. Negative phototropism is not to be confused with skototropism, which is defined as the growth towards darkness, whereas negative phototropism can refer to either the growth away from a light source or towards the darkness. Most plant shoots exhibit positive phototropism, and rearrange their chloroplasts in the leaves to maximize photosynthetic energy and promote growth. Some vine shoot tips exhibit negative phototropism, which allows them to grow towards dark, solid objects and climb them. The combination of phototropism and gravitropism allow plants to grow in the correct direction.
UV-B resistance 8 (UVR8) also known as ultraviolet-B receptor UVR8 is an UV-B – sensing protein found in plants and possibly other sources. It is responsible for sensing ultraviolet light in the range 280-315 nm and initiating the plant stress response. It is most sensitive at 285nm, near the lower limit of UVB. UVR8 was first identified as a crucial mediator of a plant's response to UV-B in Arabidopsis thaliana containing a mutation in this protein. This plant was found to have a hypersensitivity to UV-B which damages DNA. UVR8 is thought to be a unique photoreceptor as it doesn't contain a prosthetic chromophore but its light-sensing ability is intrinsic to the molecule. Tryptophan (Trp) residue 285 has been suggested to act the UV-B sensor, while other Trp residues have been also seen to be involved although in-vivo data suggests that Trp285 and Trp233 are most important.
Randy O. Wayne is an associate professor of plant biology at Cornell University. Along with his former colleague Peter K. Hepler, Wayne established the role of calcium in regulating plant growth. Their 1985 article Calcium and Plant Development was awarded the "Citation Classic" award from Current Contents magazine. They researched how plant cells sense gravity through pressure, the water permeability of plant membranes, light microscopy, as well as the effects of calcium on plant development. Wayne authored two textbooks, including Plant Cell Biology: From Astronomy to Zoology and Light and Video Microscopy.
A Light-oxygen-voltage-sensing domain is a protein sensor used by a large variety of higher plants, microalgae, fungi and bacteria to sense environmental conditions. In higher plants, they are used to control phototropism, chloroplast relocation, and stomatal opening, whereas in fungal organisms, they are used for adjusting the circadian temporal organization of the cells to the daily and seasonal periods. They are a subset of PAS domains.
Steve A. Kay is a British-born chronobiologist who mainly works in the United States. Dr. Kay has pioneered methods to monitor daily gene expression in real time and characterized circadian gene expression in plants, flies and mammals. In 2014, Steve Kay celebrated 25 years of successful chronobiology research at the Kaylab 25 Symposium, joined by over one hundred researchers with whom he had collaborated with or mentored. Dr. Kay, a member of the National Academy of Sciences, U.S.A., briefly served as president of The Scripps Research Institute. and is currently a professor at the University of Southern California. He also served on the Life Sciences jury for the Infosys Prize in 2011.
Winslow Russell Briggs was an American plant biologist who introduced techniques from molecular biology to the field of plant biology. Briggs was an international leader in molecular biological research on plant sensing, in particular how plants respond to light for growth and development and the understanding of both red and blue-light photoreceptor systems in plants. His work has made substantial contributions to plant science, agriculture and ecology.
Aureochromes are blue light photoreceptors as well as transcription factors found only in stramenopiles so far.
Carla Beth Green is an American neurobiologist and chronobiologist. She is a professor in the Department of Neuroscience and a Distinguished Scholar in Neuroscience at the University of Texas Southwestern Medical Center. She is the former president of the Society for Research on Biological Rhythms (SRBR), as well as a satellite member of the International Institute for Integrative Sleep Medicine at the University of Tsukuba in Japan.
Plant nucleus movement is the movement of the cell nucleus in plants by the cytoskeleton.
Elaine Munsey Tobin is a professor of molecular, cell, and developmental biology at the University of California, Los Angeles (UCLA). Tobin is recognized as a Pioneer Member of the American Society of Plant Biologists (ASPB).
Photoblasticism is a mechanism of seed dormancy. Photoblastic seeds require light in order to germinate. Once germination starts, the stored nutrients that have accumulated during maturation start to be digested which then supports cell expansion and overall growth. Within light-stimulated germination, Phytochrome B (PHYB) is the photoreceptor that is responsible for the beginning stages of germination. When red light is present, PHYB is converted to its active form and moves from the cytoplasm to the nucleus where it upregulates the degradation of PIF1. PIF1, phytochrome-interaction-factor-1, negatively regulates germination by increasing the expression of proteins that repress the synthesis of gibberellin (GA), a major hormone in the germination process. Another factor that promotes germination is HFR1 which accumulates in light in some way and forms inactive heterodimers with PIF1.
References
- ↑ Veetil, S.K; Mittal, C; Ranjan, P; Kateriya, S (July 2011). "A conserved isoleucine in the LOV1 domain of a novel phototropin from the marine alga Ostreococcus tauri modulates the dark state recovery of the domain". Biochim Biophys Acta. 1810 (7): 675–82. doi:10.1016/j.bbagen.2011.04.008. PMID 21554927.
- ↑ Smith, Garland (2010). Fundamentals of Biomolecular Botany (2 ed.). Fisher Press. p. 340.
- ↑ Price (2009). Molecular Basis of Botanical Biology. Phoenix Publishing. p. 213.
- ↑ Price (2009). Molecular Basis of Botanical Biology. Phoenix Publishing. p. 213.
- ↑ Wada M, Kagawa T, Sato Y (2003). "Chloroplast movement". Annu Rev Plant Biol. 54: 455–68. doi:10.1146/annurev.arplant.54.031902.135023. PMID 14502999.
- ↑ DeBlasio SL, Luesse DL, Hangarter RP (September 2005). "A plant-specific protein essential for blue-light-induced chloroplast movements". Plant Physiol. 139 (1): 101–14. doi:10.1104/pp.105.061887. PMC 1203361 . PMID 16113226.
- ↑ Folta, Kevin (2001). "Unexpected Roles for Cryptochrome 2 and Phototropin Revealed by High-resolution Analysis of Blue Light-mediated Hypocotyl Growth Inhibition". The Plant Journal. 26 (5): 471–78. doi: 10.1046/j.1365-313x.2001.01038.x . PMID 11439133.
- ↑ Brighton; et al. (2006). "Role of phototropin in the differential expression of blue light mediated mRNAs". International Journal of Molecular Botany. 72 (54): 672–691.
