A violin plot is a statistical graphic for comparing probability distributions. It is similar to a box plot, with the addition of a rotated kernel density plot on each side. [1]
A violin plot is a statistical graphic for comparing probability distributions. It is similar to a box plot, with the addition of a rotated kernel density plot on each side. [1]
The violin plot was proposed in 1997 by Jerry L. Hintze and Ray D. Nelson as a way to display even more information than box plots, which were created by John Tukey in 1977. [2] The name comes from the plot's alleged resemblance to a violin. [2]
Violin plots are similar to box plots, except that they also show the probability density of the data at different values, usually smoothed by a kernel density estimator. A violin plot will include all the data that is in a box plot: a marker for the median of the data; a box or marker indicating the interquartile range; and possibly all sample points, if the number of samples is not too high.
While a box plot shows a summary statistics such as mean/median and interquartile ranges, the violin plot shows the full distribution of the data. The violin plot can be used in multimodal data (more than one peak). In this case a violin plot shows the presence of different peaks, their position and relative amplitude.
Like box plots, violin plots are used to represent comparison of a variable distribution (or sample distribution) across different "categories" (for example, temperature distribution compared between day and night, or distribution of car prices compared across different car makers).
A violin plot can have multiple layers. For instance, the outer shape represents all possible results. The next layer inside might represent the values that occur 95% of the time. The next layer (if it exists) inside might represent the values that occur 50% of the time.
Violin plots are less popular than box plots. Violin plots may be harder to understand for readers not familiar with them. In this case, a more accessible alternative is to plot a series of stacked histograms or kernel density plots.
The original meaning of "violin plot" was a combination of a box plot and a two-sided kernel density plot. [1] However, currently "violin plots" are sometimes understood just as two-sided kernel density plots, without a box plot or any other elements. [3] [4]
A histogram is a visual representation of the distribution of quantitative data. To construct a histogram, the first step is to "bin" the range of values— divide the entire range of values into a series of intervals—and then count how many values fall into each interval. The bins are usually specified as consecutive, non-overlapping intervals of a variable. The bins (intervals) are adjacent and are typically of equal size.
In descriptive statistics, the interquartile range (IQR) is a measure of statistical dispersion, which is the spread of the data. The IQR may also be called the midspread, middle 50%, fourth spread, or H‑spread. It is defined as the difference between the 75th and 25th percentiles of the data. To calculate the IQR, the data set is divided into quartiles, or four rank-ordered even parts via linear interpolation. These quartiles are denoted by Q1 (also called the lower quartile), Q2 (the median), and Q3 (also called the upper quartile). The lower quartile corresponds with the 25th percentile and the upper quartile corresponds with the 75th percentile, so IQR = Q3 − Q1.
In statistics, quartiles are a type of quantiles which divide the number of data points into four parts, or quarters, of more-or-less equal size. The data must be ordered from smallest to largest to compute quartiles; as such, quartiles are a form of order statistic. The three quartiles, resulting in four data divisions, are as follows:
In statistics and probability, quantiles are cut points dividing the range of a probability distribution into continuous intervals with equal probabilities, or dividing the observations in a sample in the same way. There is one fewer quantile than the number of groups created. Common quantiles have special names, such as quartiles, deciles, and percentiles. The groups created are termed halves, thirds, quarters, etc., though sometimes the terms for the quantile are used for the groups created, rather than for the cut points.
The following outline is provided as an overview of and topical guide to statistics:
In descriptive statistics, a box plot or boxplot is a method for demonstrating graphically the locality, spread and skewness groups of numerical data through their quartiles. In addition to the box on a box plot, there can be lines extending from the box indicating variability outside the upper and lower quartiles, thus, the plot is also called the box-and-whisker plot and the box-and-whisker diagram. Outliers that differ significantly from the rest of the dataset may be plotted as individual points beyond the whiskers on the box-plot. Box plots are non-parametric: they display variation in samples of a statistical population without making any assumptions of the underlying statistical distribution. The spacings in each subsection of the box-plot indicate the degree of dispersion (spread) and skewness of the data, which are usually described using the five-number summary. In addition, the box-plot allows one to visually estimate various L-estimators, notably the interquartile range, midhinge, range, mid-range, and trimean. Box plots can be drawn either horizontally or vertically.
The five-number summary is a set of descriptive statistics that provides information about a dataset. It consists of the five most important sample percentiles:
Nonparametric statistics is a type of statistical analysis that makes minimal assumptions about the underlying distribution of the data being studied. Often these models are infinite-dimensional, rather than finite dimensional, as is parametric statistics. Nonparametric statistics can be used for descriptive statistics or statistical inference. Nonparametric tests are often used when the assumptions of parametric tests are evidently violated.
In statistics, the mode is the value that appears most often in a set of data values. If X is a discrete random variable, the mode is the value x at which the probability mass function takes its maximum value. In other words, it is the value that is most likely to be sampled.
In statistics, kernel density estimation (KDE) is the application of kernel smoothing for probability density estimation, i.e., a non-parametric method to estimate the probability density function of a random variable based on kernels as weights. KDE answers a fundamental data smoothing problem where inferences about the population are made based on a finite data sample. In some fields such as signal processing and econometrics it is also termed the Parzen–Rosenblatt window method, after Emanuel Parzen and Murray Rosenblatt, who are usually credited with independently creating it in its current form. One of the famous applications of kernel density estimation is in estimating the class-conditional marginal densities of data when using a naive Bayes classifier, which can improve its prediction accuracy.
This glossary of statistics and probability is a list of definitions of terms and concepts used in the mathematical sciences of statistics and probability, their sub-disciplines, and related fields. For additional related terms, see Glossary of mathematics and Glossary of experimental design.
Robust statistics are statistics that maintain their properties even if the underlying distributional assumptions are incorrect. Robust statistical methods have been developed for many common problems, such as estimating location, scale, and regression parameters. One motivation is to produce statistical methods that are not unduly affected by outliers. Another motivation is to provide methods with good performance when there are small departures from a parametric distribution. For example, robust methods work well for mixtures of two normal distributions with different standard deviations; under this model, non-robust methods like a t-test work poorly.
In statistics, a Q–Q plot (quantile–quantile plot) is a probability plot, a graphical method for comparing two probability distributions by plotting their quantiles against each other. A point (x, y) on the plot corresponds to one of the quantiles of the second distribution (y-coordinate) plotted against the same quantile of the first distribution (x-coordinate). This defines a parametric curve where the parameter is the index of the quantile interval.
In statistics, the frequency or absolute frequency of an event is the number of times the observation has occurred/been recorded in an experiment or study. These frequencies are often depicted graphically or tabular form.
A dot chart or dot plot is a statistical chart consisting of data points plotted on a fairly simple scale, typically using filled in circles. There are two common, yet very different, versions of the dot chart. The first has been used in hand-drawn graphs to depict distributions going back to 1884. The other version is described by William S. Cleveland as an alternative to the bar chart, in which dots are used to depict the quantitative values associated with categorical variables.
A plot is a graphical technique for representing a data set, usually as a graph showing the relationship between two or more variables. The plot can be drawn by hand or by a computer. In the past, sometimes mechanical or electronic plotters were used. Graphs are a visual representation of the relationship between variables, which are very useful for humans who can then quickly derive an understanding which may not have come from lists of values. Given a scale or ruler, graphs can also be used to read off the value of an unknown variable plotted as a function of a known one, but this can also be done with data presented in tabular form. Graphs of functions are used in mathematics, sciences, engineering, technology, finance, and other areas.
In statistical graphics, the functional boxplot is an informative exploratory tool that has been proposed for visualizing functional data. Analogous to the classical boxplot, the descriptive statistics of a functional boxplot are: the envelope of the 50% central region, the median curve and the maximum non-outlying envelope.
A probabilistic neural network (PNN) is a feedforward neural network, which is widely used in classification and pattern recognition problems. In the PNN algorithm, the parent probability distribution function (PDF) of each class is approximated by a Parzen window and a non-parametric function. Then, using PDF of each class, the class probability of a new input data is estimated and Bayes’ rule is then employed to allocate the class with highest posterior probability to new input data. By this method, the probability of mis-classification is minimized. This type of artificial neural network (ANN) was derived from the Bayesian network and a statistical algorithm called Kernel Fisher discriminant analysis. It was introduced by D.F. Specht in 1966. In a PNN, the operations are organized into a multilayered feedforward network with four layers:
In statistical graphics and scientific visualization, the contour boxplot is an exploratory tool that has been proposed for visualizing ensembles of feature-sets determined by a threshold on some scalar function. Analogous to the classical boxplot and considered an expansion of the concepts defining functional boxplot, the descriptive statistics of a contour boxplot are: the envelope of the 50% central region, the median curve and the maximum non-outlying envelope.
This article incorporates public domain material from Dataplot reference manual: Violin plot. National Institute of Standards and Technology.
