# F-test

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An F-test is any statistical test in which the test statistic has an F-distribution under the null hypothesis. It is most often used when comparing statistical models that have been fitted to a data set, in order to identify the model that best fits the population from which the data were sampled. Exact "F-tests" mainly arise when the models have been fitted to the data using least squares. The name was coined by George W. Snedecor, in honour of Sir Ronald A. Fisher. Fisher initially developed the statistic as the variance ratio in the 1920s. [1]

## Common examples

Common examples of the use of F-tests include the study of the following cases:

In addition, some statistical procedures, such as Scheffé's method for multiple comparisons adjustment in linear models, also use F-tests.

### F-test of the equality of two variances

The F-test is sensitive to non-normality. [2] [3] In the analysis of variance (ANOVA), alternative tests include Levene's test, Bartlett's test, and the Brown–Forsythe test. However, when any of these tests are conducted to test the underlying assumption of homoscedasticity (i.e. homogeneity of variance), as a preliminary step to testing for mean effects, there is an increase in the experiment-wise Type I error rate. [4]

## Formula and calculation

Most F-tests arise by considering a decomposition of the variability in a collection of data in terms of sums of squares. The test statistic in an F-test is the ratio of two scaled sums of squares reflecting different sources of variability. These sums of squares are constructed so that the statistic tends to be greater when the null hypothesis is not true. In order for the statistic to follow the F-distribution under the null hypothesis, the sums of squares should be statistically independent, and each should follow a scaled χ²-distribution. The latter condition is guaranteed if the data values are independent and normally distributed with a common variance.

### Multiple-comparison ANOVA problems

The F-test in one-way analysis of variance is used to assess whether the expected values of a quantitative variable within several pre-defined groups differ from each other. For example, suppose that a medical trial compares four treatments. The ANOVA F-test can be used to assess whether any of the treatments is on average superior, or inferior, to the others versus the null hypothesis that all four treatments yield the same mean response. This is an example of an "omnibus" test, meaning that a single test is performed to detect any of several possible differences. Alternatively, we could carry out pairwise tests among the treatments (for instance, in the medical trial example with four treatments we could carry out six tests among pairs of treatments). The advantage of the ANOVA F-test is that we do not need to pre-specify which treatments are to be compared, and we do not need to adjust for making multiple comparisons. The disadvantage of the ANOVA F-test is that if we reject the null hypothesis, we do not know which treatments can be said to be significantly different from the others, nor, if the F-test is performed at level α, can we state that the treatment pair with the greatest mean difference is significantly different at level α.

The formula for the one-way ANOVAF-test statistic is

${\displaystyle F={\frac {\text{explained variance}}{\text{unexplained variance}}},}$

or

${\displaystyle F={\frac {\text{between-group variability}}{\text{within-group variability}}}.}$

The "explained variance", or "between-group variability" is

${\displaystyle \sum _{i=1}^{K}n_{i}({\bar {Y}}_{i\cdot }-{\bar {Y}})^{2}/(K-1)}$

where ${\displaystyle {\bar {Y}}_{i\cdot }}$ denotes the sample mean in the i-th group, ${\displaystyle n_{i}}$ is the number of observations in the i-th group,${\displaystyle {\bar {Y}}}$ denotes the overall mean of the data, and ${\displaystyle K}$ denotes the number of groups.

The "unexplained variance", or "within-group variability" is

${\displaystyle \sum _{i=1}^{K}\sum _{j=1}^{n_{i}}\left(Y_{ij}-{\bar {Y}}_{i\cdot }\right)^{2}/(N-K),}$

where ${\displaystyle Y_{ij}}$ is the jth observation in the ith out of ${\displaystyle K}$ groups and ${\displaystyle N}$ is the overall sample size. This F-statistic follows the F-distribution with degrees of freedom ${\displaystyle d_{1}=K-1}$ and ${\displaystyle d_{2}=N-K}$ under the null hypothesis. The statistic will be large if the between-group variability is large relative to the within-group variability, which is unlikely to happen if the population means of the groups all have the same value.

Note that when there are only two groups for the one-way ANOVA F-test, ${\displaystyle F=t^{2}}$where t is the Student's ${\displaystyle t}$ statistic.

### Regression problems

Consider two models, 1 and 2, where model 1 is 'nested' within model 2. Model 1 is the restricted model, and model 2 is the unrestricted one. That is, model 1 has p1 parameters, and model 2 has p2 parameters, where p1 < p2, and for any choice of parameters in model 1, the same regression curve can be achieved by some choice of the parameters of model 2.

One common context in this regard is that of deciding whether a model fits the data significantly better than does a naive model, in which the only explanatory term is the intercept term, so that all predicted values for the dependent variable are set equal to that variable's sample mean. The naive model is the restricted model, since the coefficients of all potential explanatory variables are restricted to equal zero.

Another common context is deciding whether there is a structural break in the data: here the restricted model uses all data in one regression, while the unrestricted model uses separate regressions for two different subsets of the data. This use of the F-test is known as the Chow test.

The model with more parameters will always be able to fit the data at least as well as the model with fewer parameters. Thus typically model 2 will give a better (i.e. lower error) fit to the data than model 1. But one often wants to determine whether model 2 gives a significantly better fit to the data. One approach to this problem is to use an F-test.

If there are n data points to estimate parameters of both models from, then one can calculate the F statistic, given by

${\displaystyle F={\frac {\left({\frac {{\text{RSS}}_{1}-{\text{RSS}}_{2}}{p_{2}-p_{1}}}\right)}{\left({\frac {{\text{RSS}}_{2}}{n-p_{2}}}\right)}},}$

where RSSi is the residual sum of squares of model i. If the regression model has been calculated with weights, then replace RSSi with χ2, the weighted sum of squared residuals. Under the null hypothesis that model 2 does not provide a significantly better fit than model 1, F will have an F distribution, with (p2p1, np2) degrees of freedom. The null hypothesis is rejected if the F calculated from the data is greater than the critical value of the F-distribution for some desired false-rejection probability (e.g. 0.05). Since F is a monotone function of the likelihood ratio statistic, the F-test is a likelihood ratio test.

## Related Research Articles

Analysis of variance (ANOVA) is a collection of statistical models and their associated estimation procedures used to analyze the differences among means. ANOVA was developed by the statistician Ronald Fisher. ANOVA is based on the law of total variance, where the observed variance in a particular variable is partitioned into components attributable to different sources of variation. In its simplest form, ANOVA provides a statistical test of whether two or more population means are equal, and therefore generalizes the t-test beyond two means.

Analysis of covariance (ANCOVA) is a general linear model which blends ANOVA and regression. ANCOVA evaluates whether the means of a dependent variable (DV) are equal across levels of a categorical independent variable (IV) often called a treatment, while statistically controlling for the effects of other continuous variables that are not of primary interest, known as covariates (CV) or nuisance variables. Mathematically, ANCOVA decomposes the variance in the DV into variance explained by the CV(s), variance explained by the categorical IV, and residual variance. Intuitively, ANCOVA can be thought of as 'adjusting' the DV by the group means of the CV(s).

In statistics, deviance is a goodness-of-fit statistic for a statistical model; it is often used for statistical hypothesis testing. It is a generalization of the idea of using the sum of squares of residuals (RSS) in ordinary least squares to cases where model-fitting is achieved by maximum likelihood. It plays an important role in exponential dispersion models and generalized linear models.

In statistics, an effect size is a number measuring the strength of the relationship between two variables in a population, or a sample-based estimate of that quantity. It can refer to the value of a statistic calculated from a sample of data, the value of a parameter for a hypothetical population, or to the equation that operationalizes how statistics or parameters lead to the effect size value. Examples of effect sizes include the correlation between two variables, the regression coefficient in a regression, the mean difference, or the risk of a particular event happening. Effect sizes complement statistical hypothesis testing, and play an important role in power analyses, sample size planning, and in meta-analyses. The cluster of data-analysis methods concerning effect sizes is referred to as estimation statistics.

Linear trend estimation is a statistical technique to aid interpretation of data. When a series of measurements of a process are treated as, for example, a sequences or time series, trend estimation can be used to make and justify statements about tendencies in the data, by relating the measurements to the times at which they occurred. This model can then be used to describe the behaviour of the observed data, without explaining it. In this case linear trend estimation expresses data as a linear function of time, and can also be used to determine the significance of differences in a set of data linked by a categorical factor. An example of the latter from biomedical science would be levels of a molecule in the blood or tissues of patients with incrementally worsening disease – such as mild, moderate and severe. This is in contrast to an ANOVA, which is reserved for three or more independent groups.

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In statistics, the number of degrees of freedom is the number of values in the final calculation of a statistic that are free to vary.

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Omnibus tests are a kind of statistical test. They test whether the explained variance in a set of data is significantly greater than the unexplained variance, overall. One example is the F-test in the analysis of variance. There can be legitimate significant effects within a model even if the omnibus test is not significant. For instance, in a model with two independent variables, if only one variable exerts a significant effect on the dependent variable and the other does not, then the omnibus test may be non-significant. This fact does not affect the conclusions that may be drawn from the one significant variable. In order to test effects within an omnibus test, researchers often use contrasts.

In statistics, one-way analysis of variance is a technique that can be used to compare whether two samples means are significantly different or not. This technique can be used only for numerical response data, the "Y", usually one variable, and numerical or (usually) categorical input data, the "X", always one variable, hence "one-way".

The Brown–Forsythe test is a statistical test for the equality of group variances based on performing an Analysis of Variance (ANOVA) on a transformation of the response variable. When a one-way ANOVA is performed, samples are assumed to have been drawn from distributions with equal variance. If this assumption is not valid, the resulting F-test is invalid. The Brown–Forsythe test statistic is the F statistic resulting from an ordinary one-way analysis of variance on the absolute deviations of the groups or treatments data from their individual medians.

In statistics, a sum of squares due to lack of fit, or more tersely a lack-of-fit sum of squares, is one of the components of a partition of the sum of squares of residuals in an analysis of variance, used in the numerator in an F-test of the null hypothesis that says that a proposed model fits well. The other component is the pure-error sum of squares.

In statistics, Tukey's test of additivity, named for John Tukey, is an approach used in two-way ANOVA to assess whether the factor variables are additively related to the expected value of the response variable. It can be applied when there are no replicated values in the data set, a situation in which it is impossible to directly estimate a fully general non-additive regression structure and still have information left to estimate the error variance. The test statistic proposed by Tukey has one degree of freedom under the null hypothesis, hence this is often called "Tukey's one-degree-of-freedom test."

In statistics, the two-way analysis of variance (ANOVA) is an extension of the one-way ANOVA that examines the influence of two different categorical independent variables on one continuous dependent variable. The two-way ANOVA not only aims at assessing the main effect of each independent variable but also if there is any interaction between them.

In statistics, expected mean squares (EMS) are the expected values of certain statistics arising in partitions of sums of squares in the analysis of variance (ANOVA). They can be used for ascertaining which statistic should appear in the denominator in an F-test for testing a null hypothesis that a particular effect is absent.

## References

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3. Markowski, Carol A; Markowski, Edward P. (1990). "Conditions for the Effectiveness of a Preliminary Test of Variance". The American Statistician . 44 (4): 322–326. doi:10.2307/2684360. JSTOR   2684360.
4. Sawilowsky, S. (2002). "Fermat, Schubert, Einstein, and Behrens–Fisher: The Probable Difference Between Two Means When σ12 ≠ σ22". Journal of Modern Applied Statistical Methods. 1 (2): 461–472. Archived from the original on 2015-04-03. Retrieved 2015-03-30.