Pyrene

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Pyrene
Pyrene.svg
Pyrene molecule from xtal ball.png
Pyrene crystal 1.jpg
Names
Preferred IUPAC name
Pyrene [1]
Other names
Benzo[def]phenanthrene
Identifiers
3D model (JSmol)
1307225
ChEBI
ChEMBL
ChemSpider
ECHA InfoCard 100.004.481 OOjs UI icon edit-ltr-progressive.svg
84203
KEGG
PubChem CID
RTECS number
  • UR2450000
UNII
  • InChI=1S/C16H10/c1-3-11-7-9-13-5-2-6-14-10-8-12(4-1)15(11)16(13)14/h1-10H Yes check.svgY
    Key: BBEAQIROQSPTKN-UHFFFAOYSA-N Yes check.svgY
  • InChI=1/C16H10/c1-3-11-7-9-13-5-2-6-14-10-8-12(4-1)15(11)16(13)14/h1-10H
    Key: BBEAQIROQSPTKN-UHFFFAOYAB
  • c1cc2cccc3c2c4c1cccc4cc3
Properties
C16H10
Molar mass 202.256 g·mol−1
Appearancecolorless solid

(yellow impurities are often found at trace levels in many samples).

Contents

Density 1.271 g/cm3 [2]
Melting point 150.62 °C (303.12 °F; 423.77 K) [2]
Boiling point 394 °C (741 °F; 667 K) [2]
0.049 mg/L (0 °C)
0.139 mg/L (25 °C)
2.31 mg/L (75 °C) [3]
log P 5.08 [4]
Band gap 2.02 eV [5]
-147·10−6 cm3/mol [6]
Structure [7]
Monoclinic
P21/a
a = 13.64 Å, b = 9.25 Å, c = 8.47 Å
α = 90°, β = 100.28°, γ = 90°
4
Thermochemistry [8]
229.7 J/(K·mol)
Std molar
entropy (S⦵298)
224.9 J·mol−1·K−1
125.5 kJ·mol−1
Enthalpy of fusion (ΔfH⦵fus)
17.36 kJ·mol−1
Hazards
Occupational safety and health (OHS/OSH):
Main hazards
irritant
GHS labelling: [9]
GHS-pictogram-exclam.svg GHS-pictogram-pollu.svg
Warning
H315, H319, H335, H410
P261, P264, P271, P273, P280, P302+P352, P304+P340, P305+P351+P338, P312, P321, P332+P313, P337+P313, P362, P391, P403+P233, P405, P501
NFPA 704 (fire diamond)
2
1
0
Flash point non-flammable
Related compounds
Related PAHs
 benzopyrene
Except where otherwise noted, data are given for materials in their standard state (at 25 °C [77 °F], 100 kPa).
Yes check.svgY  verify  (what is  Yes check.svgYX mark.svgN ?)

Pyrene is a polycyclic aromatic hydrocarbon (PAH) consisting of four fused benzene rings, resulting in a flat aromatic system. The chemical formula is C16H10. This yellow-green solid is the smallest peri-fused PAH (one where the rings are fused through more than one face). Pyrene forms during incomplete combustion of organic compounds. [10]

Occurrence and properties

Pyrene was first isolated from coal tar, where it occurs up to 2% by weight. As a peri-fused PAH, pyrene is much more resonance-stabilized than its five-member-ring containing isomer fluoranthene. Therefore, it is produced in a wide range of combustion conditions. For example, automobiles produce about 1 μg/km. [11]

Reactions

Oxidation with chromate affords perinaphthenone and then naphthalene-1,4,5,8-tetracarboxylic acid. Pyrene undergoes a series of hydrogenation reactions and is susceptible to halogenation, Diels-Alder additions, and nitration, all with varying degrees of selectivity. [11] Bromination occurs at one of the 3-positions. [12]

Reduction with sodium affords the radical anion. From this anion, a variety of pi-arene complexes can be prepared. [13]

Photophysics

Pyrene and its derivatives are used commercially to make dyes and dye precursors, for example pyranine and naphthalene-1,4,5,8-tetracarboxylic acid. It has strong absorbance in UV-Vis in three sharp bands at 330 nm in DCM. The emission is close to the absorption, but moving at 375 nm. [14] The morphology of the signals change with the solvent. Its derivatives are also valuable molecular probes via fluorescence spectroscopy, having a high quantum yield and lifetime (0.65 and 410 nanoseconds, respectively, in ethanol at 293 K). Pyrene was the first molecule for which excimer behavior was discovered. [15] Such excimer appears around 450 nm. Theodor Förster reported this in 1954. [16]

Applications

Br4Py self-assembly on Au.jpg
Br4Py self-assembly on Au 2.jpg
STM image of self-assembled Br4Py molecules on Au(111) surface (top) and its model (bottom; pink spheres are Br atoms). [17]

Pyrene's fluorescence emission spectrum is very sensitive to solvent polarity, so pyrene has been used as a probe to determine solvent environments. This is due to its excited state having a different, non-planar structure than the ground state. Certain emission bands are unaffected, but others vary in intensity due to the strength of interaction with a solvent.

Diagram showing the numbering and ring fusion locations of pyrene according to IUPAC nomenclature of organic chemistry. Pyrene numbered.png
Diagram showing the numbering and ring fusion locations of pyrene according to IUPAC nomenclature of organic chemistry.

Pyrenes are strong electron donor materials and can be combined with several materials in order to make electron donor-acceptor systems which can be used in energy conversion and light harvesting applications. [14]

Safety and environmental factors

Although it is not as problematic as benzopyrene, animal studies have shown pyrene is toxic to the kidneys and liver. It is now known that pyrene affects several living functions in fish and algae. [18] [19] [20] [21]

Its biodegradation has been heavily examined. The process commences with dihydroxylation at each of two kinds of CH=CH linkages. [22] Experiments in pigs show that urinary 1-hydroxypyrene is a metabolite of pyrene, when given orally. [23]

See also

Related Research Articles

<span class="mw-page-title-main">Aromatic compound</span> Compound containing rings with delocalized pi electrons

Aromatic compounds, also known as "mono- and polycyclic aromatic hydrocarbons", are organic compounds containing one or more aromatic rings. The word "aromatic" originates from the past grouping of molecules based on smell, before their general chemical properties were understood. The current definition of aromatic compounds does not have any relation with their smell.

<span class="mw-page-title-main">Excimer</span> Excited dimeric molecule containing a noble gas

An excimer is a short-lived dimeric or heterodimeric molecule formed from two species, at least one of which has a valence shell completely filled with electrons. In this case, formation of molecules is possible only if such atom is in an electronic excited state. Heteronuclear molecules and molecules that have more than two species are also called exciplex molecules. Excimers are often diatomic and are composed of two atoms or molecules that would not bond if both were in the ground state. The lifetime of an excimer is very short, on the order of nanoseconds.

<span class="mw-page-title-main">Coronene</span> Chemical compound

Coronene is a polycyclic aromatic hydrocarbon (PAH) comprising seven peri-fused benzene rings. Its chemical formula is C
24H
12. It is a yellow material that dissolves in common solvents including benzene, toluene, and dichloromethane. Its solutions emit blue light fluorescence under UV light. It has been used as a solvent probe, similar to pyrene.

<span class="mw-page-title-main">Polycyclic aromatic hydrocarbon</span> Hydrocarbon composed of multiple aromatic rings

A polycyclic aromatic hydrocarbon (PAH) is a class of organic compounds that is composed of multiple aromatic rings. The simplest representative is naphthalene, having two aromatic rings and the three-ring compounds anthracene and phenanthrene. PAHs are uncharged, non-polar and planar. Many are colorless. Many of them are found in coal and in oil deposits, and are also produced by the incomplete combustion of organic matter—for example, in engines and incinerators or when biomass burns in forest fires.

Benzo(<i>a</i>)pyrene Carcinogenic compound found in smoke and soot

Benzo[a]pyrene (BaP or B[a]P) is a polycyclic aromatic hydrocarbon and the result of incomplete combustion of organic matter at temperatures between 300 °C (572 °F) and 600 °C (1,112 °F). The ubiquitous compound can be found in coal tar, tobacco smoke and many foods, especially grilled meats. The substance with the formula C20H12 is one of the benzopyrenes, formed by a benzene ring fused to pyrene. Its diol epoxide metabolites (more commonly known as BPDE) react with and bind to DNA, resulting in mutations and eventually cancer. It is listed as a Group 1 carcinogen by the IARC. In the 18th century a scrotal cancer of chimney sweepers, the chimney sweeps' carcinoma, was already known to be connected to soot.

<span class="mw-page-title-main">Radical anion</span> Free radical species

In organic chemistry, a radical anion is a free radical species that carries a negative charge. Radical anions are encountered in organic chemistry as reduced derivatives of polycyclic aromatic compounds, e.g. sodium naphthenide. An example of a non-carbon radical anion is the superoxide anion, formed by transfer of one electron to an oxygen molecule. Radical anions are typically indicated by .

<span class="mw-page-title-main">Fluoranthene</span> Chemical compound

Fluoranthene is a polycyclic aromatic hydrocarbon (PAH). The molecule can be viewed as the fusion of naphthalene and benzene unit connected by a five-membered ring. Although samples are often pale yellow, the compound is colorless. It is soluble in nonpolar organic solvents. It is a member of the class of PAHs known as non-alternant PAHs because it has rings other than those with six carbon atoms. It is a structural isomer of the alternant PAH pyrene. It is not as thermodynamically stable as pyrene. Its name is derived from its fluorescence under UV light.

<span class="mw-page-title-main">Ovalene</span> Chemical compound

Ovalene is a polycyclic aromatic hydrocarbon with the formula C32H14, which consists of ten peri-fused six-membered rings. It is very similar to coronene.

<span class="mw-page-title-main">Chrysene</span> Chemical compound

Chrysene is a polycyclic aromatic hydrocarbon (PAH) with the molecular formula C
18H
12 that consists of four fused benzene rings. It is a natural constituent of coal tar, from which it was first isolated and characterized. It is also found in creosote at levels of 0.5–6 mg/kg.

<i>Pomatoschistus</i> Genus of fishes

Pomatoschistus is a genus of gobies native to fresh, brackish and marine waters of Europe, the eastern Atlantic Ocean and the Mediterranean Sea.

<span class="mw-page-title-main">Lipid bilayer fusion</span>

In membrane biology, fusion is the process by which two initially distinct lipid bilayers merge their hydrophobic cores, resulting in one interconnected structure. If this fusion proceeds completely through both leaflets of both bilayers, an aqueous bridge is formed and the internal contents of the two structures can mix. Alternatively, if only one leaflet from each bilayer is involved in the fusion process, the bilayers are said to be hemifused. In hemifusion, the lipid constituents of the outer leaflet of the two bilayers can mix, but the inner leaflets remain distinct. The aqueous contents enclosed by each bilayer also remain separated.

<span class="mw-page-title-main">Benzopyrene</span>

A benzopyrene is an organic compound with the formula C20H12. Structurally speaking, the colorless isomers of benzopyrene are pentacyclic hydrocarbons and are fusion products of pyrene and a phenylene group. Two isomeric species of benzopyrene are benzo[a]pyrene and the less common benzo[e]pyrene. They belong to the chemical class of polycyclic aromatic hydrocarbons.

<span class="mw-page-title-main">Environmental impact of the petroleum industry</span>

The environmental impact of the petroleum industry is extensive and expansive due to petroleum having many uses. Crude oil and natural gas are primary energy and raw material sources that enable numerous aspects of modern daily life and the world economy. Their supply has grown quickly over the last 150 years to meet the demands of the rapidly increasing human population, creativity, knowledge, and consumerism.

Benzo(<i>j</i>)fluoranthene Chemical compound

Benzo[j]fluoranthene (BjF) is an organic compound with the chemical formula C20H12. Classified as a polycyclic aromatic hydrocarbon (PAH), it is a colourless solid that is poorly soluble in most solvents. Impure samples can appear off white. Closely related isomeric compounds include benzo[a]fluoranthene (BaF), bendo[b]fluoranthene (BbF), benzo[e]fluoranthene (BeF), and benzo[k]fluoranthene (BkF). BjF is present in fossil fuels and is released during incomplete combustion of organic matter. It has been traced in the smoke of cigarettes, exhaust from gasoline engines, emissions from the combustion of various types of coal and emissions from oil heating, as well as an impurity in some oils such as soybean oil.

<span class="mw-page-title-main">Dibenzopyrenes</span> Chemical compound

Dibenzopyrenes are a group of high molecular weight polycyclic aromatic hydrocarbons with the molecular formula C24H14. There are five isomers of dibenzopyrene which differ by the arrangement of aromatic rings: dibenzo[a,e]pyrene, dibenzo[a,h]pyrene, dibenzo[a,i]pyrene, dibenzo[a,l]pyrene, and dibenzo[e,l]pyrene.

Benzo(<i>c</i>)fluorene Chemical compound

Benzo[c]fluorene is a polycyclic aromatic hydrocarbon (PAH) with mutagenic activity. It is a component of coal tar, cigarette smoke and smog and thought to be a major contributor to its carcinogenic properties. The mutagenicity of benzo[c]fluorene is mainly attributed to formation of metabolites that are reactive and capable of forming DNA adducts. According to the KEGG it is a group 3 carcinogen. Other names for benzo[c]fluorene are 7H-benzo[c]fluorene, 3,4-benzofluorene, and NSC 89264.

(+)-Benzo(<i>a</i>)pyrene-7,8-dihydrodiol-9,10-epoxide Cancer-causing agent derived from tobacco smoke

(+)-Benzo[a]pyrene-7,8-dihydrodiol-9,10-epoxide is an organic compound with molecular formula C20H14O3. It is a metabolite and derivative of benzo[a]pyrene (found in tobacco smoke) as a result of oxidation to include hydroxyl and epoxide functionalities. (+)-Benzo[a]pyrene-7,8-dihydrodiol-9,10-epoxide binds to the N2 atom of a guanine nucleobase in DNA, distorting the double helix structure by intercalation of the pyrene moiety between base pairs through π-stacking. The carcinogenic properties of tobacco smoking are attributed in part to this compound binding and inactivating the tumor suppression ability of certain genes, leading to genetic mutations and potentially to cancer.

Indeno(1,2,3-<i>cd</i>)pyrene Polycyclic aromatic hydrocarbon

Indeno[1,2,3-cd]pyrene is a polycyclic aromatic hydrocarbon (PAH), one of 16 PAHs generally measured in studies of environmental exposure and air pollution. Many compounds of this class are formed when burning coal, oil, gas, wood, household waste and tobacco, and can bind to or form small particles in the air. The compounds are known to have toxic, mutagenic and/or carcinogenic properties. Over 100 different PAHs have been identified in environmental samples. One of these 16 is Indeno[1,2,3-cd]pyrene (IP). IP is the combination of an indeno molecule and a pyrene molecule with a fluoranthene network. In 1962, the National Cancer Institute reported that indeno[1,2,3-cd]pyrene has a slight tumor activity. This was confirmed in 1973 by the IARC in mice testing.

<i>N</i>-Heterocyclic carbene boryl anion Isoelectronic structure

An N-heterocyclic carbene boryl anion is an isoelectronic structure of an N-heterocyclic carbene (NHC), where the carbene carbon is replaced with a boron atom that has a -1 charge. NHC boryl anions have a planar geometry, and the boron atom is considered to be sp2-hybridized. They serve as extremely strong bases, as they are very nucleophilic. They also have a very strong trans influence, due to the σ-donation coming from the boron atom. NHC boryl anions have stronger electron-releasing character when compared to normal NHCs. These characteristics make NHC boryl anions key ligands in many applications, such as polycyclic aromatic hydrocarbons, and more commonly low oxidation state main group element bonding.

Ellipsomyxa is a genus of cnidarian that is part of the family Ceratomyxidae.

References

  1. ↑ International Union of Pure and Applied Chemistry (2014). Nomenclature of Organic Chemistry: IUPAC Recommendations and Preferred Names 2013. The Royal Society of Chemistry. p. 206. doi:10.1039/9781849733069. ISBN   978-0-85404-182-4.
  2. 1 2 3 Haynes, p. 3.472
  3. ↑ Haynes, p. 5.162
  4. ↑ Haynes, p. 5.176
  5. ↑ Haynes, p. 12.96
  6. ↑ Haynes, p. 3.579
  7. ↑ Camerman, A.; Trotter, J. (1965). "The crystal and molecular structure of pyrene". Acta Crystallographica. 18 (4): 636–643. doi:10.1107/S0365110X65001494.
  8. ↑ Haynes, pp. 5.34, 6.161
  9. ↑ GHS: PubChem
  10. ↑ Figueira-Duarte, Teresa M.; Müllen, Klaus (2011). "Pyrene-Based Materials for Organic Electronics". Chemical Reviews. 111 (11): 7260–7314. doi:10.1021/cr100428a. PMID   21740071.
  11. 1 2 Senkan, Selim and Castaldi, Marco (2003) "Combustion" in Ullmann's Encyclopedia of Industrial Chemistry, Wiley-VCH, Weinheim.
  12. ↑ Gumprecht, W. H. (1968). "3-Bromopyrene". Org. Synth. 48: 30. doi:10.15227/orgsyn.048.0030.
  13. ↑ Kucera, Benjamin E.; Jilek, Robert E.; Brennessel, William W.; Ellis, John E. (2014). "Bis(pyrene)metal complexes of vanadium, niobium and titanium: Isolable homoleptic pyrene complexes of transition metals". Acta Crystallographica Section C: Structural Chemistry. 70 (8): 749–753. doi:10.1107/S2053229614015290. PMID   25093352.
  14. 1 2 Tagmatarchis, Nikos; Ewels, Christopher P.; Bittencourt, Carla; Arenal, Raul; Pelaez-Fernandez, Mario; Sayed-Ahmad-Baraza, Yuman; Canton-Vitoria, Ruben (2017-06-05). "Functionalization of MoS 2 with 1,2-dithiolanes: toward donor-acceptor nanohybrids for energy conversion". npj 2D Materials and Applications. 1 (1): 13. doi: 10.1038/s41699-017-0012-8 . ISSN   2397-7132.
  15. ↑ Van Dyke, David A.; Pryor, Brian A.; Smith, Philip G.; Topp, Michael R. (May 1998). "Nanosecond Time-Resolved Fluorescence Spectroscopy in the Physical Chemistry Laboratory: Formation of the Pyrene Excimer in Solution". Journal of Chemical Education. 75 (5): 615. Bibcode:1998JChEd..75..615V. doi:10.1021/ed075p615.
  16. ↑ Förster, Th.; Kasper, K. (June 1954). "Ein Konzentrationsumschlag der Fluoreszenz". Zeitschrift für Physikalische Chemie. 1 (5_6): 275–277. doi:10.1524/zpch.1954.1.5_6.275.
  17. ↑ Pham, Tuan Anh; Song, Fei; Nguyen, Manh-Thuong; Stöhr, Meike (2014). "Self-assembly of pyrene derivatives on Au(111): Substituent effects on intermolecular interactions". Chem. Commun. 50 (91): 14089–92. doi: 10.1039/C4CC02753A . PMID   24905327.
  18. ↑ Oliveira, M.; Ribeiro, A.; Hylland, K.; Guilhermino, L. (2013). "Single and combined effects of microplastics and pyrene on juveniles (0+ group) of the common goby Pomatoschistus microps (Teleostei, Gobiidae)". Ecological Indicators. 34: 641–647. doi:10.1016/j.ecolind.2013.06.019.
  19. ↑ Oliveira, M.; Gravato, C.; Guilhermino, L. (2012). "Acute toxic effects of pyrene on Pomatoschistus microps (Teleostei, Gobiidae): Mortality, biomarkers and swimming performance". Ecological Indicators. 19: 206–214. doi:10.1016/j.ecolind.2011.08.006.
  20. ↑ Oliveira, M.; Ribeiro, A.; Guilhermino, L. (2012). "Effects of exposure to microplastics and PAHs on microalgae Rhodomonas baltica and Tetraselmis chuii". Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology. 163: S19–S20. doi:10.1016/j.cbpa.2012.05.062.
  21. ↑ Oliveira, M.; Ribeiro, A.; Guilhermino, L. (2012). "Effects of short-term exposure to microplastics and pyrene on Pomatoschistus microps (Teleostei, Gobiidae)". Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology. 163: S20. doi:10.1016/j.cbpa.2012.05.063.
  22. ↑ Seo, Jong-Su; Keum, Young-Soo; Li, Qing (2009). "Bacterial Degradation of Aromatic Compounds". International Journal of Environmental Research and Public Health. 6 (1): 278–309. doi: 10.3390/ijerph6010278 . PMC   2672333 . PMID   19440284.
  23. ↑ Keimig, S. D.; Kirby, K. W.; Morgan, D. P.; Keiser, J. E.; Hubert, T. D. (1983). "Identification of 1-hydroxypyrene as a major metabolite of pyrene in pig urine". Xenobiotica. 13 (7): 415–20. doi:10.3109/00498258309052279. PMID   6659544.

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