TPCN1

Last updated
TPCN1
Identifiers
Aliases TPCN1 , TPC1, two pore segment channel 1
External IDs OMIM: 609666 MGI: 2182472 HomoloGene: 9905 GeneCards: TPCN1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001143819
NM_001301214
NM_017901
NM_001351346
NM_001351347

Contents

NM_145853

RefSeq (protein)

NP_001137291
NP_001288143
NP_060371
NP_001338275
NP_001338276

NP_665852

Location (UCSC) Chr 12: 113.22 – 113.3 Mb Chr 5: 120.67 – 120.73 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Two pore segment channel 1 (TPC1) is a human protein encoded by the TPCN1 gene. [5] The protein encoded by this gene is an ion channel. In contrast to other calcium and sodium channels which have four homologous domains, each containing six transmembrane segments (S1 to S6), TPCN1 only contains two domains (each containing segments S1 to S6). [6] [7] [8]

Structure

The structure of a TPC1 ortholog from Arabidopsis thaliana has been solved by two laboratories. [9] [10] The structures were solved using X-ray crystallography and contained the fold of a voltage-gated ion channel and EF hands. Only a single voltage sensor domain appears to responsible for voltage sensing.

Filoviral infections

Genetic knockout and pharmacological inhibition experiments demonstrate that the two-pore channels, TPC1 and TPC2, are required for infection by Filoviruses Ebola and Marburg in mice. [11]

See also

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References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000186815 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000032741 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: two pore segment channel 1".
  6. Hirosawa M, Nagase T, Ishikawa K, Kikuno R, Nomura N, Ohara O (October 1999). "Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain". DNA Research. 6 (5): 329–36. doi: 10.1093/dnares/6.5.329 . PMID   10574461.
  7. Ishibashi K, Suzuki M, Imai M (April 2000). "Molecular cloning of a novel form (two-repeat) protein related to voltage-gated sodium and calcium channels". Biochemical and Biophysical Research Communications. 270 (2): 370–6. doi:10.1006/bbrc.2000.2435. PMID   10753632.
  8. Clapham DE, Garbers DL (December 2005). "International Union of Pharmacology. L. Nomenclature and structure-function relationships of CatSper and two-pore channels". Pharmacological Reviews. 57 (4): 451–4. doi:10.1124/pr.57.4.7. PMID   16382101. S2CID   35096827.
  9. Guo J, Zeng W, Chen Q, Lee C, Chen L, Yang Y, Cang C, Ren D, Jiang Y (March 2016). "Structure of the voltage-gated two-pore channel TPC1 from Arabidopsis thaliana". Nature. 531 (7593): 196–201. Bibcode:2016Natur.531..196G. doi:10.1038/nature16446. PMC   4841471 . PMID   26689363.
  10. Kintzer AF, Stroud RM (March 2016). "Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana". Nature. 531 (7593): 258–62. Bibcode:2016Natur.531..258K. doi:10.1038/nature17194. PMC   4863712 . PMID   26961658.
  11. Sakurai Y, Kolokoltsov AA, Chen CC, Tidwell MW, Bauta WE, Klugbauer N, Grimm C, Wahl-Schott C, Biel M, Davey RA (February 2015). "Ebola virus. Two-pore channels control Ebola virus host cell entry and are drug targets for disease treatment". Science. 347 (6225): 995–8. doi:10.1126/science.1258758. PMC   4550587 . PMID   25722412.

Further reading