SPTBN1

Last updated
SPTBN1
Protein SPTBN1 PDB 1aa2.png
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases SPTBN1 , ELF, HEL102, SPTB2, betaSpII, spectrin beta, non-erythrocytic 1, DDISBA
External IDs OMIM: 182790 MGI: 98388 HomoloGene: 2354 GeneCards: SPTBN1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_003128
NM_178313

NM_009260
NM_175836

RefSeq (protein)

NP_003119
NP_842565

NP_033286
NP_787030

Location (UCSC) Chr 2: 54.46 – 54.67 Mb Chr 11: 30.05 – 30.22 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Spectrin beta chain, brain 1 is a protein that in humans is encoded by the SPTBN1 gene. [5]

Contents

Function

Spectrin is an actin crosslinking and molecular scaffold protein that links the plasma membrane to the actin cytoskeleton, and functions in the determination of cell shape, arrangement of transmembrane proteins, and organization of organelles. It is composed of two antiparallel dimers of alpha- and beta- subunits. This gene is one member of a family of beta-spectrin genes. The encoded protein contains an N-terminal actin-binding domain, and 17 spectrin repeats that are involved in dimer formation. Multiple transcript variants encoding different isoforms have been found for this gene. [5]

Interactions

SPTBN1 has been shown to interact with Merlin. [6]

Related Research Articles

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Fimbrin also known as is plastin 1 is a protein that in humans is encoded by the PLS1 gene. Fimbrin is an actin cross-linking protein important in the formation of filopodia.

<span class="mw-page-title-main">Merlin (protein)</span> Mammalian protein found in Homo sapiens

Merlin is a cytoskeletal protein. In humans, it is a tumor suppressor protein involved in neurofibromatosis type II. Sequence data reveal its similarity to the ERM protein family.

Actinin is a microfilament protein. The functional protein is an anti-parallel dimer, which cross-links the thin filaments in adjacent sarcomeres, and therefore coordinates contractions between sarcomeres in the horizontal axis. Alpha-actinin is a part of the spectrin superfamily. This superfamily is made of spectrin, dystrophin, and their homologous and isoforms. In non-muscle cells, it is found by the actin filaments and at the adhesion sites.The lattice like arrangement provides stability to the muscle contractile apparatus. Specifically, it helps bind actin filaments to the cell membrane. There is a binding site at each end of the rod and with bundles of actin filaments.

<span class="mw-page-title-main">Protein 4.1</span> Protein-coding gene in the species Homo sapiens

Protein 4.1,, is a protein associated with the cytoskeleton that in humans is encoded by the EPB41 gene. Protein 4.1 is a major structural element of the erythrocyte membrane skeleton. It plays a key role in regulating membrane physical properties of mechanical stability and deformability by stabilizing spectrin-actin interaction. Protein 4.1 interacts with spectrin and short actin filaments to form the erythrocyte membrane skeleton. Mutations of spectrin and protein 4.1 are associated with elliptocytosis or spherocytosis and anemia of varying severity.

<span class="mw-page-title-main">Beta-actin</span> Protein-coding gene in the species Homo sapiens

Actin beta is one of six different actin isoforms which have been identified in humans. This is one of the two nonmuscle cytoskeletal actins. Actins are highly conserved proteins that are involved in cell motility, structure and integrity. Alpha actins are a major constituent of the contractile apparatus.

<span class="mw-page-title-main">FLNA</span> Protein-coding gene in humans

Filamin A, alpha (FLNA) is a protein that in humans is encoded by the FLNA gene.

<span class="mw-page-title-main">DNAJA3</span> Protein-coding gene in the species Homo sapiens

DnaJ homolog subfamily A member 3, mitochondrial, also known as Tumorous imaginal disc 1 (TID1), is a protein that in humans is encoded by the DNAJA3 gene on chromosome 16. This protein belongs to the DNAJ/Hsp40 protein family, which is known for binding and activating Hsp70 chaperone proteins to perform protein folding, degradation, and complex assembly. As a mitochondrial protein, it is involved in maintaining membrane potential and mitochondrial DNA (mtDNA) integrity, as well as cellular processes such as cell movement, growth, and death. Furthermore, it is associated with a broad range of diseases, including neurodegenerative diseases, inflammatory diseases, and cancers.

<span class="mw-page-title-main">Alpha-actinin-1</span> Protein-coding gene in the species Homo sapiens

Alpha-actinin-1 is a protein that in humans is encoded by the ACTN1 gene.

<span class="mw-page-title-main">SPTAN1</span> Protein-coding gene in the species Homo sapiens

Alpha II-spectrin, also known as Spectrin alpha chain, brain is a protein that in humans is encoded by the SPTAN1 gene. Alpha II-spectrin is expressed in a variety of tissues, and is highly expressed in cardiac muscle at Z-disc structures, costameres and at the sarcolemma membrane. Mutations in alpha II-spectrin have been associated with early infantile epileptic encephalopathy-5, and alpha II-spectrin may be a valuable biomarker for Guillain–Barré syndrome and infantile congenital heart disease.

<span class="mw-page-title-main">ADD1</span> Protein-coding gene in the species Homo sapiens

Alpha-adducin is a protein that in humans is encoded by the ADD1 gene.

<span class="mw-page-title-main">Alpha-actinin-2</span> Protein-coding gene in the species Homo sapiens

Alpha-actinin-2 is a protein which in humans is encoded by the ACTN2 gene. This gene encodes an alpha-actinin isoform that is expressed in both skeletal and cardiac muscles and functions to anchor myofibrillar actin thin filaments and titin to Z-discs.

<span class="mw-page-title-main">Alpha-actinin-4</span> Protein-coding gene in the species Homo sapiens

Alpha-actinin-4 is a protein that in humans is encoded by the ACTN4 gene.

<span class="mw-page-title-main">ADD2</span> Protein-coding gene in the species Homo sapiens

Beta-adducin is a protein that in humans is encoded by the ADD2 gene.

<span class="mw-page-title-main">ACTR1A</span> Protein-coding gene in the species Homo sapiens

Alpha-centractin (yeast) or ARP1 is a protein that in humans is encoded by the ACTR1A gene.

<span class="mw-page-title-main">ADD3</span> Protein-coding gene in the species Homo sapiens

Gamma-adducin is a protein that in humans is encoded by the ADD3 gene.

<span class="mw-page-title-main">SPTBN2</span> Protein-coding gene in the species Homo sapiens

Spectrin beta chain, brain 2 is a protein that in humans is encoded by the SPTBN2 gene.

<span class="mw-page-title-main">SPTBN4</span> Protein-coding gene in the species Homo sapiens

Spectrin, beta, non-erythrocytic 4, also known as SPTBN4, is a protein that in humans is encoded by the SPTBN4 gene.

<span class="mw-page-title-main">Ankyrin-1</span> Protein-coding gene in the species Homo sapiens

Ankyrin 1, also known as ANK-1, and erythrocyte ankyrin, is a protein that in humans is encoded by the ANK1 gene.

<span class="mw-page-title-main">Calponin homology domain</span>

Calponin homology domain (or CH domain) is a family of actin binding domains found in both cytoskeletal proteins and signal transduction proteins. The domain is about 100 amino acids in length and is composed of four alpha helices. It comprises the following groups of actin-binding domains:

<span class="mw-page-title-main">Calponin 1</span> Protein-coding gene in the species Homo sapiens

Calponin 1 is a basic smooth muscle protein that in humans is encoded by the CNN1 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000115306 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000020315 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. 1 2 "Entrez Gene: SPTBN1 spectrin, beta, non-erythrocytic 1".
  6. Neill GW, Crompton MR (September 2001). "Binding of the merlin-I product of the neurofibromatosis type 2 tumour suppressor gene to a novel site in beta-fodrin is regulated by association between merlin domains". Biochem. J. 358 (Pt 3): 727–35. doi:10.1042/0264-6021:3580727. PMC   1222106 . PMID   11535133.

Further reading