TUBA1B

TUBA1B
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2E4H, 4TV8, 3RYI, 3JAR, 4TUY, 4TV9, 4YJ2, 3RYH, 3JAK, 3JAS, 4F61, 3UT5, 4O4J, 4YJ3, 4EB6, 4WBN, 3JAW, 4O2A, 3RYF, 3JAL, 4O4H, 4LNU, 3J8Y, 4IIJ, 4O4I, 3RYC, 4O4L, 4O2B, 4I50, 3JAT, 4HNA, 4F6R, 3J8X, 5CA0, 5ITZ, 5JQG, 5IJ0, 5FNV, 5IJ9
Identifiers
Aliases	TUBA1B , K-ALPHA-1, tubulin alpha 1b
External IDs	OMIM: 602530; MGI: 107804; HomoloGene: 134527; GeneCards: TUBA1B; OMA:TUBA1B - orthologs
Gene location (Human) Chr. Chromosome 12 (human) [1] Band 12q13.12 Start 49,127,782 bp [1] End 49,131,397 bp [1]
Gene location (Mouse) Chr. Chromosome 15 (mouse) [2] Band 15|15 F1 Start 98,829,306 bp [2] End 98,832,446 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in ventricular zone frontal pole superior frontal gyrus prefrontal cortex thalamus Brodmann area 10 right frontal lobe dorsolateral prefrontal cortex cingulate gyrus anterior cingulate cortex Top expressed in ventricular zone hypothalamus tail of embryo mesencephalon epiblast neural tube genital tubercle dentate gyrus of hippocampal formation granule cell cerebellar cortex primary visual cortex More reference expression data BioGPS n/a
Gene ontology Molecular function nucleotide binding GTP binding structural molecule activity structural constituent of cytoskeleton protein binding GTPase activity double-stranded RNA binding ubiquitin protein ligase binding Cellular component cytoplasm myelin sheath cytoplasmic microtubule microtubule cytoskeleton microtubule cytoskeleton membrane raft Biological process cellular response to interleukin-4 cytoskeleton-dependent intracellular transport cell division microtubule-based process microtubule cytoskeleton organization mitotic cell cycle Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 10376 22143 Ensembl ENSG00000123416 ENSMUSG00000023004 UniProt P68363 P05213 RefSeq (mRNA) NM_006082 NM_011654 RefSeq (protein) NP_006073 NP_035784 Location (UCSC) Chr 12: 49.13 – 49.13 Mb Chr 15: 98.83 – 98.83 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Tubulin alpha-1B chain is a protein that in humans is encoded by the TUBA1B gene. ^{[5] [6] [7]}

Interactions

TUBA1B has been shown to interact with PIK3R1. ^[8] Antibodies against tubulin alpha 1b can be used as markers for microtubules and spindles. ^[9]

References

1. GRCh38: Ensembl release 89: ENSG00000123416 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000023004 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Banerjee A (Jun 2002). "Increased levels of tyrosinated alpha-, beta(III)-, and beta(IV)-tubulin isotypes in paclitaxel-resistant MCF-7 breast cancer cells". Biochem Biophys Res Commun. 293 (1): 598–601. doi:10.1016/S0006-291X(02)00269-3. PMID   12054644.
6. Cowan NJ, Dobner PR, Fuchs EV, Cleveland DW (Jan 1984). "Expression of human alpha-tubulin genes: interspecies conservation of 3' untranslated regions". Mol Cell Biol. 3 (10): 1738–45. doi:10.1128/mcb.3.10.1738. PMC   370035 . PMID   6646120.
7. "Entrez Gene: TUBA1B tubulin, alpha 1b".
8. Kapeller, R; Toker A; Cantley L C; Carpenter C L (Oct 1995). "Phosphoinositide 3-kinase binds constitutively to alpha/beta-tubulin and binds to gamma-tubulin in response to insulin". J. Biol. Chem. 270 (43). UNITED STATES: 25985–91. doi: 10.1074/jbc.270.43.25985 . ISSN   0021-9258. PMID   7592789.
9. "Anti-alpha Tubulin antibody [GT114] (GTX628802) | GeneTex".

Further reading

• Venter JC (1993). "Identification of new human receptor and transporter genes by high throughput cDNA (EST) sequencing". J. Pharm. Pharmacol. 45. Suppl 1: 355–60. PMID   8098743.
• Lopez-Fanarraga M, Avila J, Guasch A, et al. (2002). "Review: postchaperonin tubulin folding cofactors and their role in microtubule dynamics". J. Struct. Biol. 135 (2): 219–29. doi:10.1006/jsbi.2001.4386. PMID   11580271.
• Kapeller R, Toker A, Cantley LC, Carpenter CL (1995). "Phosphoinositide 3-kinase binds constitutively to alpha/beta-tubulin and binds to gamma-tubulin in response to insulin". J. Biol. Chem. 270 (43): 25985–91. doi: 10.1074/jbc.270.43.25985 . PMID   7592789.
• Alexandrova N, Niklinski J, Bliskovsky V, et al. (1995). "The N-terminal domain of c-Myc associates with alpha-tubulin and microtubules in vivo and in vitro". Mol. Cell. Biol. 15 (9): 5188–95. doi:10.1128/mcb.15.9.5188. PMC   230766 . PMID   7651436.
• Szasz J, Yaffe MB, Sternlicht H (1993). "Site-directed mutagenesis of alpha-tubulin. Reductive methylation studies of the Lys 394 region". Biophys. J. 64 (3): 792–802. Bibcode:1993BpJ....64..792S. doi:10.1016/S0006-3495(93)81440-1. PMC   1262393 . PMID   8097117.
• Baumann MH, Wisniewski T, Levy E, et al. (1996). "C-terminal fragments of alpha- and beta-tubulin form amyloid fibrils in vitro and associate with amyloid deposits of familial cerebral amyloid angiopathy, British type". Biochem. Biophys. Res. Commun. 219 (1): 238–42. doi: 10.1006/bbrc.1996.0211 . PMID   8619814.
• Gress TM, Müller-Pillasch F, Geng M, et al. (1996). "A pancreatic cancer-specific expression profile". Oncogene. 13 (8): 1819–30. PMID   8895530.
• Crépieux P, Kwon H, Leclerc N, et al. (1997). "I kappaB alpha physically interacts with a cytoskeleton-associated protein through its signal response domain". Mol. Cell. Biol. 17 (12): 7375–85. doi:10.1128/mcb.17.12.7375. PMC   232593 . PMID   9372968.
• Herreros L, Rodríguez-Fernandez JL, Brown MC, et al. (2000). "Paxillin localizes to the lymphocyte microtubule organizing center and associates with the microtubule cytoskeleton". J. Biol. Chem. 275 (34): 26436–40. doi: 10.1074/jbc.M003970200 . hdl: 10261/135387 . PMID   10840040.
• Watts NR, Sackett DL, Ward RD, et al. (2000). "HIV-1 rev depolymerizes microtubules to form stable bilayered rings". J. Cell Biol. 150 (2): 349–60. doi:10.1083/jcb.150.2.349. PMC   2180222 . PMID   10908577.
• Takeoka A, Shimizu M, Horio T (2001). "Identification of an alpha-tubulin mutant of fission yeast from gamma-tubulin-interacting protein screening: genetic evidence for alpha-/gamma-tubulin interaction". J. Cell Sci. 113. Pt 24 (24): 4557–62. doi:10.1242/jcs.113.24.4557. PMID   11082048.
• Germani A, Bruzzoni-Giovanelli H, Fellous A, et al. (2001). "SIAH-1 interacts with alpha-tubulin and degrades the kinesin Kid by the proteasome pathway during mitosis". Oncogene. 19 (52): 5997–6006. doi: 10.1038/sj.onc.1204002 . PMID   11146551.
• Yokota S, Yanagi H, Yura T, Kubota H (2001). "Cytosolic chaperonin-containing t-complex polypeptide 1 changes the content of a particular subunit species concomitant with substrate binding and folding activities during the cell cycle". Eur. J. Biochem. 268 (17): 4664–73. doi:10.1046/j.1432-1327.2001.02393.x. PMID   11532003.
• Rommelaere H, De Neve M, Neirynck K, et al. (2001). "Prefoldin recognition motifs in the nonhomologous proteins of the actin and tubulin families". J. Biol. Chem. 276 (44): 41023–8. doi: 10.1074/jbc.M106591200 . PMID   11535601.
• Klein C, Kramer EM, Cardine AM, et al. (2002). "Process outgrowth of oligodendrocytes is promoted by interaction of fyn kinase with the cytoskeletal protein tau". J. Neurosci. 22 (3): 698–707. doi:10.1523/JNEUROSCI.22-03-00698.2002. PMC   6758498 . PMID   11826099.
• Saugstad JA, Yang S, Pohl J, et al. (2002). "Interaction between metabotropic glutamate receptor 7 and alpha tubulin". J. Neurochem. 80 (6): 980–8. doi:10.1046/j.0022-3042.2002.00778.x. PMC   2925652 . PMID   11953448.

External links

• TUBA1B human gene location in the UCSC Genome Browser .
• TUBA1B human gene details in the UCSC Genome Browser .