Mitochondrial ribosomal protein L17

MRPL17
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2CQM, 3J7Y, 3J9M
Identifiers
Aliases	MRPL17 , L17mt, LIP2, MRP-L17, MRP-L26, RPL17L, RPML26, mitochondrial ribosomal protein L17
External IDs	OMIM: 611830; MGI: 1351608; HomoloGene: 32526; GeneCards: MRPL17; OMA:MRPL17 - orthologs
Gene location (Human) Chr. Chromosome 11 (human) [1] Band 11p15.4 Start 6,680,385 bp [1] End 6,683,340 bp [1]
Gene location (Mouse) Chr. Chromosome 7 (mouse) [2] Band 7|7 E3 Start 105,452,413 bp [2] End 105,460,306 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in stromal cell of endometrium apex of heart anterior pituitary left adrenal gland right ventricle right adrenal gland left adrenal cortex gonad right adrenal cortex muscle of thigh Top expressed in blastocyst embryo embryo yolk sac morula right kidney otic placode lip muscle of thigh epiblast More reference expression data BioGPS More reference expression data
Gene ontology Molecular function structural constituent of ribosome protein domain specific binding Cellular component ribosome intracellular anatomical structure mitochondrion mitochondrial large ribosomal subunit mitochondrial inner membrane Biological process mitochondrial translational elongation mitochondrial translational termination protein biosynthesis mitochondrial genome maintenance Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 63875 27397 Ensembl ENSG00000158042 ENSMUSG00000030879 UniProt Q9NRX2 Q9D8P4 RefSeq (mRNA) NM_022061 NM_025301 RefSeq (protein) NP_071344 NP_079577 Location (UCSC) Chr 11: 6.68 – 6.68 Mb Chr 7: 105.45 – 105.46 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

39S ribosomal protein L17, mitochondrial is a protein that in humans is encoded by the MRPL17 gene. ^[5]

Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. ^[5]

References

1. GRCh38: Ensembl release 89: ENSG00000158042 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000030879 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: MRPL17 mitochondrial ribosomal protein L17".

Further reading

• Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC   1356129 . PMID   16344560.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Zhang Z, Gerstein M (2003). "Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome". Genomics. 81 (5): 468–80. doi:10.1016/S0888-7543(03)00004-1. PMID   12706105.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Tchernev VT, Mansfield TA, Giot L, et al. (2002). "The Chediak-Higashi protein interacts with SNARE complex and signal transduction proteins". Mol. Med. 8 (1): 56–64. doi:10.1007/bf03402003. PMC   2039936 . PMID   11984006.
• Kenmochi N, Suzuki T, Uechi T, et al. (2001). "The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders". Genomics. 77 (1–2): 65–70. doi:10.1006/geno.2001.6622. PMID   11543634.
• Hu RM, Han ZG, Song HD, et al. (2000). "Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning". Proc. Natl. Acad. Sci. U.S.A. 97 (17): 9543–8. Bibcode:2000PNAS...97.9543H. doi: 10.1073/pnas.160270997 . PMC   16901 . PMID   10931946.
• O'Brien TW, Fiesler SE, Denslow ND, et al. (2000). "Mammalian mitochondrial ribosomal proteins (2). Amino acid sequencing, characterization, and identification of corresponding gene sequences". J. Biol. Chem. 274 (51): 36043–51. doi: 10.1074/jbc.274.51.36043 . PMID   10593885.
• Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi: 10.1101/gr.6.9.791 . PMID   8889548.

External links

• Overview of all the structural information available in the PDB for UniProt : Q9NRX2 (39S ribosomal protein L17, mitochondrial) at the PDBe-KB .