60S ribosomal protein L7a

RPL7A
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	4UG0, 4V6X, 5AJ0, 4UJD, 4D67, 4D5Y, 4UJE, 4UJC
Identifiers
Aliases	RPL7A , L7A, SURF3, TRUP, ribosomal protein L7a
External IDs	OMIM: 185640 MGI: 1353472 HomoloGene: 105462 GeneCards: RPL7A
Gene location (Human)
Chr.	Chromosome 9 (human)
End	133,351,426 bp
Gene location (Mouse)
Chr.	Chromosome 2 (mouse)
End	26,803,330 bp
RNA expression pattern
	Top expressed in
	islet of Langerhans; ; right uterine tube; ; right adrenal gland; ; smooth muscle tissue; ; pituitary gland; ; rectum; ; anterior pituitary; ; zone of skin; ; body of pancreas; ; skin of abdomen;
	Top expressed in
	ganglionic eminence; ; uterus; ; ovary; ; esophagus; ; lip; ; mirror; ; ileum; ; colon; ; zone of skin; ; thymus;
	More reference expression data
	n/a
Gene ontology
Molecular function	structural constituent of ribosome ; protein binding ; cadherin binding ; RNA binding ;
Cellular component	cytoplasm ; cytosol ; ribosome ; membrane ; focal adhesion ; nucleolus ; cytosolic large ribosomal subunit ; extracellular exosome ; nucleus ; polysomal ribosome ; ribonucleoprotein complex ;
Biological process	ribosome biogenesis ; viral transcription ; SRP-dependent cotranslational protein targeting to membrane ; translational initiation ; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ; rRNA processing ; maturation of LSU-rRNA ; protein biosynthesis ;
	Sources:Amigo / QuickGO
Orthologs
	6130
	27176
	ENSG00000280858 ; ENSG00000148303
	ENSMUSG00000062647
	P62424
	P12970
	NM_000972
	NM_013721
	NP_000963
	NP_038749
	Wikidata
View/Edit Human	View/Edit Mouse

Last updated September 12, 2023

60S ribosomal protein L7a is a protein that in humans is encoded by the RPL7A gene.^[5]^[6]^[7]

Cytoplasmic ribosomes, organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L7AE family of ribosomal proteins. It can interact with a subclass of nuclear hormone receptors, including thyroid hormone receptor, and inhibit their ability to transactivate by preventing their binding to their DNA response elements. This gene is included in the surfeit gene cluster, a group of very tightly linked genes that do not share sequence similarity. It is co-transcribed with the U24, U36a, U36b, and U36c small nucleolar RNA genes, which are located in its second, fifth, fourth, and sixth introns, respectively. This gene rearranges with the trk proto-oncogene to form the chimeric oncogene trk-2h, which encodes an oncoprotein consisting of the N terminus of ribosomal protein L7a fused to the receptor tyrosine kinase domain of trk. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome.^[7]

Related Research Articles

<span class="mw-page-title-main">Small nucleolar RNA SNORD24</span>

In molecular biology, U24 is a member of the C/D class of snoRNA which contain the C (UGAUGA) and D (CUGA) box motifs. C/D box snoRNAs have been shown to act as methylation guides for a number of RNA targets. U24 is encoded within an intron of the gene for ribosomal protein L7a in mammals, chicken and Fugu. The U76/SNORD76 snoRNA is found in an intron of the uRNA host gene (UHG) growth arrest specific 5 (GAS5) transcript gene. snoRNAs Z20 and U76 snoRNAs show clear similarity to U24.

<span class="mw-page-title-main">Small nucleolar RNA SNORD36</span>

In molecular biology, snoRNA U36 is a non-coding RNA (ncRNA) molecule which functions in the biogenesis (modification) of other small nuclear RNAs (snRNAs). This type of modifying RNA is located in the nucleolus of the eukaryotic cell which is a major site of snRNA biogenesis. It is known as a small nucleolar RNA (snoRNA) and also often referred to as a guide RNA.

60S ribosomal protein L5 is a protein that in humans is encoded by the RPL5 gene.

60S ribosomal protein L10 is a protein that in humans is encoded by the RPL10 gene.

40S ribosomal protein S3 is a protein that in humans is encoded by the RPS3 gene.

40S ribosomal protein S3a is a protein that in humans is encoded by the RPS3A gene.

60S ribosomal protein L3 is a protein that in humans is encoded by the RPL3 gene.

40S ribosomal protein S13 is a protein that in humans is encoded by the RPS13 gene.

60S ribosomal protein L18a is a protein that in humans is encoded by the RPL18A gene.

40S ribosomal protein S17 is a protein that in humans is encoded by the RPS17 gene.

60S ribosomal protein L13a is a protein that in humans is encoded by the RPL13A gene.

60S ribosomal protein L8 is a protein that in humans is encoded by the RPL8 gene.

60S ribosomal protein L19 is a protein that in humans is encoded by the RPL19 gene.

40S ribosomal protein S20 is a protein that in humans is encoded by the RPS20 gene.

60S ribosomal protein L23a is a protein that in humans is encoded by the RPL23A gene.

40S ribosomal protein S8 is a protein that in humans is encoded by the RPS8 gene.

40S ribosomal protein S11 is a protein that in humans is encoded by the RPS11 gene.

60S ribosomal protein L17 is a protein that in humans is encoded by the RPL17 gene.

60S ribosomal protein L30 is a protein that in humans is encoded by the RPL30 gene.

60S ribosomal protein L39 is a protein that in humans is encoded by the RPL39 gene.

References

1 2 3 ENSG00000148303 GRCh38: Ensembl release 89: ENSG00000280858, ENSG00000148303 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000062647 - Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ Ziemiecki A, Muller RG, Fu XC, Hynes NE, Kozma S (Feb 1990). "Oncogenic activation of the human trk proto-oncogene by recombination with the ribosomal large subunit protein L7a". EMBO J. 9 (1): 191–6. doi:10.1002/j.1460-2075.1990.tb08095.x. PMC 551645 . PMID 2403926.
↑ Kozma SC, Redmond SM, Fu XC, Saurer SM, Groner B, Hynes NE (May 1988). "Activation of the receptor kinase domain of the trk oncogene by recombination with two different cellular sequences". EMBO J. 7 (1): 147–54. doi:10.1002/j.1460-2075.1988.tb02794.x. PMC 454232 . PMID 2966065.
1 2 "Entrez Gene: RPL7A ribosomal protein L7a".

Wool IG, Chan YL, Glück A (1996). "Structure and evolution of mammalian ribosomal proteins". Biochem. Cell Biol. 73 (11–12): 933–47. doi:10.1139/o95-101. PMID 8722009.
Colombo P, Fried M (1992). "Functional elements of the ribosomal protein L7a (rpL7a) gene promoter region and their conservation between mammals and birds". Nucleic Acids Res. 20 (13): 3367–73. doi:10.1093/nar/20.13.3367. PMC 312491 . PMID 1630908.
Ben-Ishai R, Scharf R, Sharon R, Kapten I (1990). "A human cellular sequence implicated in trk oncogene activation is DNA damage inducible". Proc. Natl. Acad. Sci. U.S.A. 87 (16): 6039–43. Bibcode:1990PNAS...87.6039B. doi: 10.1073/pnas.87.16.6039 . PMC 54467 . PMID 1696715.
Colombo P, Yon J, Fried M (1992). "The organization and expression of the human L7a ribosomal protein gene". Biochim. Biophys. Acta. 1129 (1): 93–5. doi:10.1016/0167-4781(91)90218-b. PMID 1756182.
Burris TP, Nawaz Z, Tsai MJ, O'Malley BW (1995). "A nuclear hormone receptor-associated protein that inhibits transactivation by the thyroid hormone and retinoic acid receptors". Proc. Natl. Acad. Sci. U.S.A. 92 (21): 9525–9. Bibcode:1995PNAS...92.9525B. doi: 10.1073/pnas.92.21.9525 . PMC 40834 . PMID 7568167.
Qu LH, Henry Y, Nicoloso M, et al. (1995). "U24, a novel intron-encoded small nucleolar RNA with two 12 nt long, phylogenetically conserved complementarities to 28S rRNA". Nucleic Acids Res. 23 (14): 2669–76. doi:10.1093/nar/23.14.2669. PMC 307091 . PMID 7651828.
Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
Seshadri T, Uzman JA, Oshima J, Campisi J (1993). "Identification of a transcript that is down-regulated in senescent human fibroblasts. Cloning, sequence analysis, and regulation of the human L7 ribosomal protein gene". J. Biol. Chem. 268 (25): 18474–80. doi: 10.1016/S0021-9258(17)46650-6 . PMID 8360149.
De Falco S, Russo G, Angiolillo A, Pietropaolo C (1993). "Human L7a ribosomal protein: sequence, structural organization, and expression of a functional gene". Gene. 126 (2): 227–35. doi:10.1016/0378-1119(93)90371-9. PMID 8482538.
Yon J, Jones T, Garson K, et al. (1993). "The organization and conservation of the human Surfeit gene cluster and its localization telomeric to the c-abl and can proto-oncogenes at chromosome band 9q34.1". Hum. Mol. Genet. 2 (3): 237–40. doi:10.1093/hmg/2.3.237. PMID 8499913.
Nicoloso M, Qu LH, Michot B, Bachellerie JP (1996). "Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs". J. Mol. Biol. 260 (2): 178–95. doi:10.1006/jmbi.1996.0391. PMID 8764399.
Mor O, Duhig T, Fried M (1996). "A high frequency polymorphism in the candidate region for tuberous sclerosis 1 (TSC1) at 9q34". Ann. Hum. Genet. 60 (Pt 3): 259–60. doi:10.1111/j.1469-1809.1996.tb00429.x. PMID 8800442. S2CID 31900112.
Russo G, Ricciardelli G, Pietropaolo C (1997). "Different domains cooperate to target the human ribosomal L7a protein to the nucleus and to the nucleoli". J. Biol. Chem. 272 (8): 5229–35. doi: 10.1074/jbc.272.8.5229 . PMID 9030593.
Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
Kenmochi N, Kawaguchi T, Rozen S, et al. (1998). "A map of 75 human ribosomal protein genes". Genome Res. 8 (5): 509–23. doi: 10.1101/gr.8.5.509 . PMID 9582194.
Gilley J, Fried M (1998). "Evolution of U24 and U36 snoRNAs encoded within introns of vertebrate rpL7a gene homologs: unique features of mammalian U36 variants". DNA Cell Biol. 17 (7): 591–602. doi:10.1089/dna.1998.17.591. PMID 9703018.
Lalli E, Ohe K, Hindelang C, Sassone-Corsi P (2000). "Orphan receptor DAX-1 is a shuttling RNA binding protein associated with polyribosomes via mRNA". Mol. Cell. Biol. 20 (13): 4910–21. doi:10.1128/MCB.20.13.4910-4921.2000. PMC 85942 . PMID 10848616.

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[refGRCh38Ensembl-1] 1 2 3 ENSG00000148303 GRCh38: Ensembl release 89: ENSG00000280858, ENSG00000148303 - Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000062647 - Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid2403926-5] Ziemiecki A, Muller RG, Fu XC, Hynes NE, Kozma S (Feb 1990). "Oncogenic activation of the human trk proto-oncogene by recombination with the ribosomal large subunit protein L7a". EMBO J. 9 (1): 191–6. doi:10.1002/j.1460-2075.1990.tb08095.x. PMC 551645 . PMID 2403926.

[pmid2966065-6] Kozma SC, Redmond SM, Fu XC, Saurer SM, Groner B, Hynes NE (May 1988). "Activation of the receptor kinase domain of the trk oncogene by recombination with two different cellular sequences". EMBO J. 7 (1): 147–54. doi:10.1002/j.1460-2075.1988.tb02794.x. PMC 454232 . PMID 2966065.

[entrez-7] 1 2 "Entrez Gene: RPL7A ribosomal protein L7a".

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60S ribosomal protein L7a

Related Research Articles

References

Further reading