60S ribosomal protein L30

RPL30
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 3VI6, 4UG0, 4V6X, 5AJ0, 3J92, 4UJC, 3J7P, 4UJE, 3J7Q, 3J7R, 4D67, 4UJD, 4V5Z, 4D5Y, 3J7O
Identifiers
Aliases	RPL30 , L30, ribosomal protein L30
External IDs	OMIM: 180467 MGI: 98037 HomoloGene: 766 GeneCards: RPL30
Gene location (Human) Chr. Chromosome 8 (human) [1] Band 8q22.2 Start 98,024,851 bp [1] End 98,046,469 bp [1]
Gene location (Mouse) Chr. Chromosome 15 (mouse) [2] Band 15 B3.1|15 14.33 cM Start 34,440,651 bp [2] End 34,443,786 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in parietal pleura urethra germinal epithelium secondary oocyte lactiferous duct caput epididymis vena cava visceral pleura lymph node canal of the cervix Top expressed in yolk sac lip morula superior frontal gyrus spermatocyte spermatid thymus cerebellar cortex proximal tubule esophagus More reference expression data BioGPS More reference expression data
Gene ontology Molecular function structural constituent of ribosome protein binding RNA binding selenocysteine insertion sequence binding Cellular component cytosol ribosome membrane focal adhesion intracellular anatomical structure extracellular exosome nucleus extracellular matrix cytosolic large ribosomal subunit postsynaptic density polysomal ribosome Biological process protein biosynthesis viral transcription SRP-dependent cotranslational protein targeting to membrane translational initiation nuclear-transcribed mRNA catabolic process, nonsense-mediated decay rRNA processing antimicrobial humoral immune response mediated by antimicrobial peptide cytoplasmic translation liver regeneration positive regulation of selenocysteine incorporation Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 6156 19946 Ensembl ENSG00000156482 ENSMUSG00000058600 UniProt P62888 P62889 RefSeq (mRNA) NM_000989 NM_001163485 NM_009083 RefSeq (protein) NP_000980 NP_001156957 NP_033109 Location (UCSC) Chr 8: 98.02 – 98.05 Mb Chr 15: 34.44 – 34.44 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

60S ribosomal protein L30 is a protein that in humans is encoded by the RPL30 gene. ^{[5] [6]}

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L30E family of ribosomal proteins. It is located in the cytoplasm. This gene is co-transcribed with the U72 small nucleolar RNA gene, which is located in its fourth intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000156482 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000058600 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Feo S, Davies B, Fried M (Jun 1992). "The mapping of seven intron-containing ribosomal protein genes shows they are unlinked in the human genome". Genomics. 13 (1): 201–207. doi:10.1016/0888-7543(92)90221-D. PMID   1577483.
6. "Entrez Gene: RPL30 ribosomal protein L30".

Further reading

• Wool IG, Chan YL, Glück A (1996). "Structure and evolution of mammalian ribosomal proteins". Biochem. Cell Biol. 73 (11–12): 933–947. doi:10.1139/o95-101. PMID   8722009.
• Kato S, Sekine S, Oh SW, et al. (1995). "Construction of a human full-length cDNA bank". Gene. 150 (2): 243–250. doi:10.1016/0378-1119(94)90433-2. PMID   7821789.
• Kenmochi N, Kawaguchi T, Rozen S, et al. (1998). "A map of 75 human ribosomal protein genes". Genome Res. 8 (5): 509–23. doi: 10.1101/gr.8.5.509 . PMID   9582194.
• Yoshihama M, Uechi T, Asakawa S, et al. (2002). "The human ribosomal protein genes: sequencing and comparative analysis of 73 genes". Genome Res. 12 (3): 379–390. doi:10.1101/gr.214202. PMC   155282 . PMID   11875025.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–16903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Bouwmeester T, Bauch A, Ruffner H, et al. (2004). "A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway". Nat. Cell Biol. 6 (2): 97–105. doi:10.1038/ncb1086. PMID   14743216. S2CID   11683986.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–2127. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Beausoleil SA, Villén J, Gerber SA, et al. (2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. Biotechnol. 24 (10): 1285–1292. doi:10.1038/nbt1240. PMID   16964243. S2CID   14294292.
• De Bortoli M, Castellino RC, Lu XY, et al. (2006). "Medulloblastoma outcome is adversely associated with overexpression of EEF1D, RPL30, and RPS20 on the long arm of chromosome 8". BMC Cancer. 6: 223. doi: 10.1186/1471-2407-6-223 . PMC   1578584 . PMID   16968546.