ELF5

Last updated
ELF5
Protein ELF5 PDB 1wwx.png
Available structures
PDB Human UniProt search: PDBe RCSB
Identifiers
Aliases ELF5 , ESE2, E74 like ETS transcription factor 5
External IDs OMIM: 605169 HomoloGene: 7702 GeneCards: ELF5
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_198381
NM_001243080
NM_001243081
NM_001422

n/a

RefSeq (protein)

NP_001230009
NP_001230010
NP_001413
NP_938195

n/a

Location (UCSC) Chr 11: 34.48 – 34.53 Mb n/a
PubMed search [2] n/a
Wikidata
View/Edit Human

E74-like factor 5 (ets domain transcription factor), is a gene found in both mice and humans. [3] In humans it is also called ESE2.

Contents

Function

The protein encoded by this gene is a member of an epithelium-specific subclass of the ETS transcription factor family. In addition to its role in regulating the later stages of terminal differentiation of keratinocytes, it appears to regulate a number of epithelium-specific genes found in tissues containing glandular epithelium such as salivary gland and prostate. It has very low affinity to DNA due to its negative regulatory domain at the amino terminus. Two alternatively spliced transcript variants encoding different isoforms have been described for this gene. [3]

Relevance to Disease

A role in breast or prostate cancer is known. [4] There are preliminary reports that the C allele genetic variant of rs61882275 near chromosome location 11.13 with variable incidence in human populations [5] is associated with severe COVID-19. [6] Further investigation by others suggested the association was caused by a tissue-specific effect on ELF5 expression in lung endothelium by this allele which results in a more than 4-fold higher risk of severe COVID-19 in those with SARS-CoV2 infection. [7]


Related Research Articles

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<span class="mw-page-title-main">ELF2</span> Protein-coding gene in the species Homo sapiens

E74-like factor 2 (ELF2), formerly known as new Ets-related factor (NERF), is an ETS family transcription factor. In humans this protein is encoded by the ELF2 gene.

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<span class="mw-page-title-main">ELF1</span> Protein-coding gene in the species Homo sapiens

E74-like factor 1 is a protein that in humans is encoded by the ELF1 gene.

<span class="mw-page-title-main">E74 like ets transcription factor 3</span> Protein-coding gene in the species Homo sapiens

E74 like ETS transcription factor 3 is a protein that in humans is encoded by the ELF3 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000135374 - Ensembl, May 2017
  2. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. 1 2 "Entrez Gene: ELF5 E74-like factor 5 (ets domain transcription factor)".
  4. Piggin CL, Roden DL, Gallego-Ortega D, Lee HJ, Oakes SR, Ormandy CJ (7 January 2016). "ELF5 isoform expression is tissue-specific and significantly altered in cancer". Breast Cancer Research. 18 (1). 4. doi: 10.1186/s13058-015-0666-0 . PMC   4704400 . PMID   26738740.
  5. "dbSNP Short Genetic Variations: rs61882275" . Retrieved January 21, 2022.
  6. Kousathanas A, et al. (8 September 2021). "Whole genome sequencing identifies multiple loci for critical illness caused by COVID-19". medRxiv   10.1101/2021.09.02.21262965 .
  7. Pietzner M, et al. (19 January 2022). "ELF5 is a respiratory epithelial cell-specific risk gene for severe COVID-19". medRxiv   10.1101/2022.01.17.22269283 .

Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.