LMX1A

Last updated
LMX1A
Identifiers
Aliases LMX1A , LMX1, LMX1.1, LIM homeobox transcription factor 1 alpha, DFNA7
External IDs OMIM: 600298 MGI: 1888519 HomoloGene: 24921 GeneCards: LMX1A
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001033507
NM_001174069
NM_177398
NM_177399

NM_033652

RefSeq (protein)

NP_001167540
NP_796372

NP_387501

Location (UCSC) Chr 1: 165.2 – 165.36 Mb Chr 1: 167.52 – 167.68 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

LIM homeobox transcription factor 1, alpha, also known as LMX1A, is a protein which in humans is encoded by the LMX1A gene. [5] [6]

Contents

Function

Insulin is produced exclusively by the beta cells in the islets of Langerhans in the pancreas. The level and beta-cell specificity of insulin gene expression are regulated by a set of nuclear genes that bind to specific sequences within the promoter of the insulin gene INS and interact with RNA polymerase to activate or repress transcription. LMX1 is a LIM homeobox transcription factor that binds an A/T-rich sequence in the insulin promoter and stimulates transcription of insulin. [7]

Interactions

LMX1A has been shown to interact with TCF3 [8] and LHX3. [9]

Related Research Articles

LMX1B Protein-coding gene in the species Homo sapiens

LIM homeobox transcription factor 1-beta, also known as LMX1B, is a protein which in humans is encoded by the LMX1B gene.

TCF3 Protein-coding gene in the species Homo sapiens

Transcription factor 3, also known as TCF3, is a protein that in humans is encoded by the TCF3 gene. TCF3 has been shown to directly enhance Hes1 expression.

Sterol regulatory element-binding protein 1 Protein-coding gene in the species Homo sapiens

Sterol regulatory element-binding transcription factor 1 (SREBF1) also known as sterol regulatory element-binding protein 1 (SREBP-1) is a protein that in humans is encoded by the SREBF1 gene.

PDX1 A protein involved in the pancreas and duodenum differentiation

PDX1, also known as insulin promoter factor 1, is a transcription factor in the ParaHox gene cluster. In vertebrates, Pdx1 is necessary for pancreatic development, including β-cell maturation, and duodenal differentiation. In humans this protein is encoded by the PDX1 gene, which was formerly known as IPF1. The gene was originally identified in the clawed frog Xenopus laevis and is present widely across the evolutionary diversity of bilaterian animals, although it has been lost in evolution in arthropods and nematodes. Despite the gene name being Pdx1, there is no Pdx2 gene in most animals; single-copy Pdx1 orthologs have been identified in all mammals. Coelacanth and cartilaginous fish are, so far, the only vertebrates shown to have two Pdx genes, Pdx1 and Pdx2.

LMO2

LIM domain only 2, also known as LMO2, RBTNL1, RBTN2, RHOM2, LIM Domain Only Protein 2, TTG2, and T-Cell Translocation Protein 2, is a protein which in humans is encoded by the LMO2 gene.

LDB1

LIM domain-binding protein 1 is a protein that in humans is encoded by the LDB1 gene.

LHX3 Protein-coding gene in the species Homo sapiens

LIM/homeobox protein Lhx3 is a protein that in humans is encoded by the LHX3 gene.

ISL1

Insulin gene enhancer protein ISL-1 is a protein that in humans is encoded by the ISL1 gene.

PKNOX1 Protein-coding gene in the species Homo sapiens

PBX/Knotted 1 Homeobox 1 (PKNOX1) is a protein that in humans is encoded by the PKNOX1 gene.

HOXB9

Homeobox protein Hox-B9 is a protein that in humans is encoded by the HOXB9 gene.

HOXB3

Homeobox protein Hox-B3 is a protein that in humans is encoded by the HOXB3 gene.

HOXD9

Homeobox protein Hox-D9 is a protein that in humans is encoded by the HOXD9 gene.

LMO1

Rhombotin-1 is a protein that in humans is encoded by the LMO1 gene.

HOXD4

Homeobox protein Hox-D4 is a protein that in humans is encoded by the HOXD4 gene.

PRRX1 Protein-coding gene in the species Homo sapiens

Paired related homeobox 1 is a protein that in humans is encoded by the PRRX1 gene.

LMO4

LIM domain transcription factor LMO4 is a protein that in humans is encoded by the LMO4 gene.

HOXC11

Homeobox protein Hox-C11 is a protein that in humans is encoded by the HOXC11 gene.

MEIS2

Homeobox protein Meis2 is a protein that in humans is encoded by the MEIS2 gene.

LHX1 Protein-coding gene in the species Homo sapiens

LIM homeobox 1 is a protein that in humans is encoded by the LHX1 gene. This gene encodes a member of a large protein family which contains the LIM domain, a unique cysteine-rich zinc-binding domain. The encoded protein is a transcription factor important for control of differentiation and development of neural and lymphoid cells. It is also key in development of renal and urogenital systems and is required for normal organogenesis. A similar protein in mice is an essential regulator of the vertebrate head organizer.

NKX6-1

Homeobox protein Nkx-6.1 is a protein that in humans is encoded by the NKX6-1 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000162761 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000026686 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: LMX1A LIM homeobox transcription factor 1, alpha".
  6. German MS, Wang J, Fernald AA, Espinosa R, Le Beau MM, Bell GI (November 1994). "Localization of the genes encoding two transcription factors, LMX1 and CDX3, regulating insulin gene expression to human chromosomes 1 and 13". Genomics. 24 (2): 403–4. doi:10.1006/geno.1994.1639. PMID   7698771.
  7. "Entrez Gene: LMX1A".
  8. Johnson JD, Zhang W, Rudnick A, Rutter WJ, German MS (Jul 1997). "Transcriptional synergy between LIM-homeodomain proteins and basic helix-loop-helix proteins: the LIM2 domain determines specificity". Mol. Cell. Biol. 17 (7): 3488–96. doi:10.1128/mcb.17.7.3488. PMC   232202 . PMID   9199284.
  9. Jurata LW, Pfaff SL, Gill GN (Feb 1998). "The nuclear LIM domain interactor NLI mediates homo- and heterodimerization of LIM domain transcription factors". J. Biol. Chem. 273 (6): 3152–7. doi: 10.1074/jbc.273.6.3152 . PMID   9452425.

Further reading