KLF5

KLF5
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2EBT
Identifiers
Aliases	KLF5 , BTEB2, CKLF, IKLF, Kruppel-like factor 5 (intestinal), Kruppel like factor 5
External IDs	OMIM: 602903 MGI: 1338056 HomoloGene: 37520 GeneCards: KLF5
Gene location (Human) Chr. Chromosome 13 (human) [1] Band 13q22.1 Start 73,054,976 bp [1] End 73,077,541 bp [1]
Gene location (Mouse) Chr. Chromosome 14 (mouse) [2] Band 14|14 E2.2 Start 99,536,127 bp [2] End 99,552,472 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in human penis amniotic fluid nipple skin of abdomen oral cavity rectum palpebral conjunctiva urethra jejunal mucosa body of tongue Top expressed in left colon crypt of lieberkuhn of small intestine mucosa of urinary bladder conjunctival fornix ileum Paneth cell belly cord left lung lobe gastric mucosa corneal stroma More reference expression data BioGPS More reference expression data
Gene ontology Molecular function DNA binding DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific metal ion binding RNA polymerase II cis-regulatory region sequence-specific DNA binding protein binding nucleic acid binding sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription factor binding MRF binding Cellular component Golgi apparatus intracellular membrane-bounded organelle nucleoplasm nucleus transcription regulator complex Biological process regulation of microvillus assembly microvillus assembly regulation of transcription, DNA-templated intestinal epithelial cell development regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II transcription by RNA polymerase II transcription, DNA-templated positive regulation of transcription, DNA-templated angiogenesis skeletal muscle cell differentiation positive regulation of fat cell differentiation positive regulation of transcription by RNA polymerase II cellular response to organic cyclic compound positive regulation of cell population proliferation cellular response to peptide cellular response to leukemia inhibitory factor cell-cell signaling via exosome positive regulation of pri-miRNA transcription by RNA polymerase II regulation of gene expression skeletal muscle satellite cell differentiation satellite cell activation involved in skeletal muscle regeneration myotube differentiation involved in skeletal muscle regeneration skeletal muscle tissue regeneration positive regulation of transcription by transcription factor localization Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 688 12224 Ensembl ENSG00000102554 ENSMUSG00000005148 UniProt Q13887 Q9Z0Z7 RefSeq (mRNA) NM_001730 NM_001286818 NM_009769 RefSeq (protein) NP_001273747 NP_001721 NP_033899 Location (UCSC) Chr 13: 73.05 – 73.08 Mb Chr 14: 99.54 – 99.55 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Krueppel-like factor 5 is a protein that in humans is encoded by the KLF5 gene. ^{[5] [6]}

Function

This gene encodes a member of the Kruppel-like factor subfamily of zinc finger proteins. Since the protein localizes to the nucleus and binds the epidermal growth factor response element, it is thought to be a transcription factor. ^[6]

Interactions

KLF5 has been shown to interact with Protein SET. ^[7]

Clinical significance

KLF5 expression has been linked to higher survival rates for lung cancer patients. ^[8]

See also

• Kruppel-like factors

References

1. GRCh38: Ensembl release 89: ENSG00000102554 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000005148 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Sogawa K, Imataka H, Yamasaki Y, Kusume H, Abe H, Fujii-Kuriyama Y (Apr 1993). "cDNA cloning and transcriptional properties of a novel GC box-binding protein, BTEB2". Nucleic Acids Research. 21 (7): 1527–32. doi:10.1093/nar/21.7.1527. PMC   309358 . PMID   8479902.
6. "Entrez Gene: KLF5 Kruppel-like factor 5 (intestinal)".
7. Miyamoto S, Suzuki T, Muto S, Aizawa K, Kimura A, Mizuno Y, Nagino T, Imai Y, Adachi N, Horikoshi M, Nagai R (Dec 2003). "Positive and negative regulation of the cardiovascular transcription factor KLF5 by p300 and the oncogenic regulator SET through interaction and acetylation on the DNA-binding domain". Molecular and Cellular Biology. 23 (23): 8528–41. doi:10.1128/MCB.23.23.8528-8541.2003. PMC   262669 . PMID   14612398.
8. "Research update from the MCM team (May 2024)". World Community Grid. 13 May 2024. Retrieved 21 May 2024.

Further reading

• Ghaleb AM, Nandan MO, Chanchevalap S, Dalton WB, Hisamuddin IM, Yang VW (Feb 2005). "Krüppel-like factors 4 and 5: the yin and yang regulators of cellular proliferation". Cell Research. 15 (2): 92–6. doi:10.1038/sj.cr.7290271. PMC   1317089 . PMID   15740636.
• Nagai R, Suzuki T, Aizawa K, Shindo T, Manabe I (Aug 2005). "Significance of the transcription factor KLF5 in cardiovascular remodeling". Journal of Thrombosis and Haemostasis. 3 (8): 1569–76. doi: 10.1111/j.1538-7836.2005.01366.x . PMID   16102021.
• McConnell BB, Ghaleb AM, Nandan MO, Yang VW (Jun 2007). "The diverse functions of Krüppel-like factors 4 and 5 in epithelial biology and pathobiology". BioEssays. 29 (6): 549–57. doi:10.1002/bies.20581. PMC   2211634 . PMID   17508399.
• Kojima S, Kobayashi A, Gotoh O, Ohkuma Y, Fujii-Kuriyama Y, Sogawa K (Feb 1997). "Transcriptional activation domain of human BTEB2, a GC box-binding factor". Journal of Biochemistry. 121 (2): 389–96. doi:10.1093/oxfordjournals.jbchem.a021600. PMID   9089417.
• Conkright MD, Wani MA, Anderson KP, Lingrel JB (Mar 1999). "A gene encoding an intestinal-enriched member of the Krüppel-like factor family expressed in intestinal epithelial cells". Nucleic Acids Research. 27 (5): 1263–70. doi:10.1093/nar/27.5.1263. PMC   148310 . PMID   9973612.
• Shi H, Zhang Z, Wang X, Liu S, Teng CT (Dec 1999). "Isolation and characterization of a gene encoding human Kruppel-like factor 5 (IKLF): binding to the CAAT/GT box of the mouse lactoferrin gene promoter". Nucleic Acids Research. 27 (24): 4807–15. doi:10.1093/nar/27.24.4807. PMC   148782 . PMID   10572182.
• Hoshino Y, Kurabayashi M, Kanda T, Hasegawa A, Sakamoto H, Okamoto E, Kowase K, Watanabe N, Manabe I, Suzuki T, Nakano A, Takase S, Wilcox JN, Nagai R (Nov 2000). "Regulated expression of the BTEB2 transcription factor in vascular smooth muscle cells: analysis of developmental and pathological expression profiles shows implications as a predictive factor for restenosis". Circulation. 102 (20): 2528–34. doi: 10.1161/01.cir.102.20.2528 . PMID   11076828.
• Sun R, Chen X, Yang VW (Mar 2001). "Intestinal-enriched Krüppel-like factor (Krüppel-like factor 5) is a positive regulator of cellular proliferation". The Journal of Biological Chemistry. 276 (10): 6897–900. doi: 10.1074/jbc.C000870200 . PMC   2268089 . PMID   11152667.
• Dang DT, Zhao W, Mahatan CS, Geiman DE, Yang VW (Jul 2002). "Opposing effects of Krüppel-like factor 4 (gut-enriched Krüppel-like factor) and Krüppel-like factor 5 (intestinal-enriched Krüppel-like factor) on the promoter of the Krüppel-like factor 4 gene". Nucleic Acids Research. 30 (13): 2736–41. doi:10.1093/nar/gkf400. PMC   117055 . PMID   12087155.
• Shindo T, Manabe I, Fukushima Y, Tobe K, Aizawa K, Miyamoto S, Kawai-Kowase K, Moriyama N, Imai Y, Kawakami H, Nishimatsu H, Ishikawa T, Suzuki T, Morita H, Maemura K, Sata M, Hirata Y, Komukai M, Kagechika H, Kadowaki T, Kurabayashi M, Nagai R (Aug 2002). "Krüppel-like zinc-finger transcription factor KLF5/BTEB2 is a target for angiotensin II signaling and an essential regulator of cardiovascular remodeling". Nature Medicine. 8 (8): 856–63. doi:10.1038/nm738. PMID   12101409. S2CID   34181151.
• Sur I, Undén AB, Toftgård R (Jun 2002). "Human Krüppel-like factor5/KLF5: synergy with NF-kappaB/Rel factors and expression in human skin and hair follicles". European Journal of Cell Biology. 81 (6): 323–34. doi:10.1078/0171-9335-00257. PMID   12113473.
• Chen C, Bhalala HV, Qiao H, Dong JT (Sep 2002). "A possible tumor suppressor role of the KLF5 transcription factor in human breast cancer". Oncogene. 21 (43): 6567–72. doi: 10.1038/sj.onc.1205817 . PMID   12242654.
• Yang XO, Doty RT, Hicks JS, Willerford DM (Jun 2003). "Regulation of T-cell receptor D beta 1 promoter by KLF5 through reiterated GC-rich motifs". Blood. 101 (11): 4492–9. doi: 10.1182/blood-2002-08-2579 . PMID   12576331.
• Chen C, Bhalala HV, Vessella RL, Dong JT (May 2003). "KLF5 is frequently deleted and down-regulated but rarely mutated in prostate cancer". The Prostate. 55 (2): 81–8. doi:10.1002/pros.10205. PMID   12661032. S2CID   21150851.
• Zhang Z, Teng CT (Apr 2003). "Phosphorylation of Kruppel-like factor 5 (KLF5/IKLF) at the CBP interaction region enhances its transactivation function". Nucleic Acids Research. 31 (8): 2196–208. doi:10.1093/nar/gkg310. PMC   153738 . PMID   12682370.
• Ohnishi S, Ohnami S, Laub F, Aoki K, Suzuki K, Kanai Y, Haga K, Asaka M, Ramirez F, Yoshida T (Aug 2003). "Downregulation and growth inhibitory effect of epithelial-type Krüppel-like transcription factor KLF4, but not KLF5, in bladder cancer". Biochemical and Biophysical Research Communications. 308 (2): 251–6. doi:10.1016/S0006-291X(03)01356-1. PMID   12901861.
• Aizawa K, Suzuki T, Kada N, Ishihara A, Kawai-Kowase K, Matsumura T, Sasaki K, Munemasa Y, Manabe I, Kurabayashi M, Collins T, Nagai R (Jan 2004). "Regulation of platelet-derived growth factor-A chain by Krüppel-like factor 5: new pathway of cooperative activation with nuclear factor-kappaB". The Journal of Biological Chemistry. 279 (1): 70–6. doi: 10.1074/jbc.M306621200 . PMID   14573617.
• Sato T, Kanda T, Iida T, Takahashi T, Kishi S, Hoshino Y (2004). "Immunohistochemical study of surgically excised choroidal neovascular membranes". The Journal of International Medical Research. 31 (5): 402–6. doi: 10.1177/147323000303100507 . PMID   14587307. S2CID   33670045.

External links

• KLF5+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.