ZNF346

ZNF346
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2MKD, 2MKN
Identifiers
Aliases	ZNF346 , JAZ, Zfp346, zinc finger protein 346
External IDs	OMIM: 605308 MGI: 1349417 HomoloGene: 8073 GeneCards: ZNF346
Gene location (Human) Chr. Chromosome 5 (human) [1] Band 5q35.2 Start 177,022,696 bp [1] End 177,081,189 bp [1]
Gene location (Mouse) Chr. Chromosome 13 (mouse) [2] Band 13|13 B1 Start 55,105,311 bp [2] End 55,134,825 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in pancreatic ductal cell sural nerve ganglionic eminence Achilles tendon tibialis anterior muscle prefrontal cortex oocyte left lobe of thyroid gland smooth muscle tissue blood Top expressed in spermatocyte extraocular muscle superior frontal gyrus thymus cerebellar cortex adrenal gland right ventricle seminiferous tubule temporal muscle thoracic diaphragm More reference expression data BioGPS n/a
Gene ontology Molecular function enzyme binding double-stranded RNA binding zinc ion binding p53 binding protein binding metal ion binding nucleic acid binding RNA binding miRNA binding Cellular component cytoplasm nucleolus nucleus Biological process intrinsic apoptotic signaling pathway by p53 class mediator positive regulation of apoptotic process Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 23567 26919 Ensembl ENSG00000113761 ENSMUSG00000021481 UniProt Q9UL40 Q9R0B7 RefSeq (mRNA) NM_001308213 NM_001308214 NM_001308215 NM_001308216 NM_001308218 NM_001308219 NM_001308221 NM_001308223 NM_012279 NM_001363713 NM_012017 RefSeq (protein) NP_001295142 NP_001295143 NP_001295144 NP_001295145 NP_001295147 NP_001295148 NP_001295150 NP_001295152 NP_036411 NP_001350642 NP_036147 NP_001365863 NP_001365864 Location (UCSC) Chr 5: 177.02 – 177.08 Mb Chr 13: 55.11 – 55.13 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Zinc finger protein 346 is a protein that in humans is encoded by the ZNF346 gene. ^{[5] [6]}

The protein encoded by this gene is a nucleolar, zinc finger protein that preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids, rather than DNA alone. Mutational studies indicate that the zinc finger domains are not only essential for dsRNA binding, but are also required for its nucleolar localization. The encoded protein may be involved in cell growth and survival. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000113761 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000021481 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Yang M, May WS, Ito T (Nov 1999). "JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization". J Biol Chem. 274 (39): 27399–406. doi: 10.1074/jbc.274.39.27399 . PMID   10488071.
6. "Entrez Gene: ZNF346 zinc finger protein 346".

Further reading

• Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC   310948 . PMID   11076863.
• Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Chen T, Brownawell AM, Macara IG (2004). "Nucleocytoplasmic shuttling of JAZ, a new cargo protein for exportin-5". Mol. Cell. Biol. 24 (15): 6608–19. doi:10.1128/MCB.24.15.6608-6619.2004. PMC   444848 . PMID   15254228.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC   528930 . PMID   15489336.
• Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC   1347501 . PMID   16381901.

External links

• ZNF346+protein,+human at the US National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.