GTF3C1

GTF3C1
Identifiers
Aliases	GTF3C1 , TFIIIC, TFIIIC220, TFIIICalpha, general transcription factor IIIC subunit 1
External IDs	OMIM: 603246; MGI: 107887; HomoloGene: 31040; GeneCards: GTF3C1; OMA:GTF3C1 - orthologs
Gene location (Human) Chr. Chromosome 16 (human) [1] Band 16p12.1 Start 27,459,555 bp [1] End 27,549,913 bp [1]
Gene location (Mouse) Chr. Chromosome 7 (mouse) [2] Band 7 F3|7 69.01 cM Start 125,240,126 bp [2] End 125,306,952 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in anterior pituitary skin of leg skin of abdomen sural nerve right lobe of thyroid gland ventricular zone left lobe of thyroid gland right hemisphere of cerebellum apex of heart stromal cell of endometrium Top expressed in tail of embryo spermatocyte genital tubercle internal carotid artery external carotid artery dentate gyrus of hippocampal formation granule cell neural layer of retina superior frontal gyrus ventricular zone vestibular membrane of cochlear duct More reference expression data BioGPS More reference expression data
Gene ontology Molecular function DNA binding protein binding RNA polymerase III general transcription initiation factor activity RNA polymerase III type 1 promoter sequence-specific DNA binding RNA polymerase III type 2 promoter sequence-specific DNA binding Cellular component transcription factor TFIIIC complex nucleolus membrane nucleus nucleoplasm ribonucleoprotein complex Biological process tRNA transcription by RNA polymerase III rRNA transcription tRNA transcription transcription, DNA-templated transcription by RNA polymerase III regulation of transcription by RNA polymerase III transcription initiation from RNA polymerase III promoter 5S class rRNA transcription by RNA polymerase III Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 2975 233863 Ensembl ENSG00000077235 ENSMUSG00000032777 UniProt Q12789 Q8K284 RefSeq (mRNA) NM_001286242 NM_001520 NM_207239 RefSeq (protein) NP_001273171 NP_001511 NP_997122 Location (UCSC) Chr 16: 27.46 – 27.55 Mb Chr 7: 125.24 – 125.31 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

General transcription factor 3C polypeptide 1 is a protein that in humans is encoded by the GTF3C1 gene. ^{[5] [6] [7]}

Interactions

GTF3C1 has been shown to interact with GTF3C4. ^[8]

References

1. GRCh38: Ensembl release 89: ENSG00000077235 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000032777 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Lagna G, Kovelman R, Sukegawa J, Roeder RG (May 1994). "Cloning and characterization of an evolutionarily divergent DNA-binding subunit of mammalian TFIIIC". Mol. Cell. Biol. 14 (5): 3053–64. doi:10.1128/mcb.14.5.3053. PMC   358673 . PMID   8164661.
6. L'Etoile ND, Fahnestock ML, Shen Y, Aebersold R, Berk AJ (Apr 1994). "Human transcription factor IIIC box B binding subunit". Proc. Natl. Acad. Sci. U.S.A. 91 (5): 1652–6. Bibcode:1994PNAS...91.1652L. doi: 10.1073/pnas.91.5.1652 . PMC   43221 . PMID   8127861.
7. "Entrez Gene: GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa".
8. Hsieh YJ, Kundu TK, Wang Z, Kovelman R, Roeder RG (Nov 1999). "The TFIIIC90 subunit of TFIIIC interacts with multiple components of the RNA polymerase III machinery and contains a histone-specific acetyltransferase activity". Mol. Cell. Biol. 19 (11): 7697–704. doi:10.1128/mcb.19.11.7697. PMC   84812 . PMID   10523658.

Further reading

• Jang KL, Collins MK, Latchman DS (1992). "The human immunodeficiency virus tat protein increases the transcription of human Alu repeated sequences by increasing the activity of the cellular transcription factor TFIIIC". J. Acquir. Immune Defic. Syndr. 5 (11): 1142–7. PMID   1403646.
• Kovelman R, Roeder RG (1992). "Purification and characterization of two forms of human transcription factor IIIC". J. Biol. Chem. 267 (34): 24446–56. doi: 10.1016/S0021-9258(18)35787-9 . PMID   1447193.
• Wang Z, Roeder RG (1998). "DNA topoisomerase I and PC4 can interact with human TFIIIC to promote both accurate termination and transcription reinitiation by RNA polymerase III". Mol. Cell. 1 (5): 749–57. doi: 10.1016/S1097-2765(00)80074-X . PMID   9660958.
• Loftus BJ, Kim UJ, Sneddon VP, Kalush F, Brandon R, Fuhrmann J, Mason T, Crosby ML, Barnstead M, Cronin L, Deslattes Mays A, Cao Y, Xu RX, Kang HL, Mitchell S, Eichler EE, Harris PC, Venter JC, Adams MD (1999). "Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q". Genomics. 60 (3): 295–308. doi:10.1006/geno.1999.5927. PMID   10493829.
• Hsieh YJ, Kundu TK, Wang Z, Kovelman R, Roeder RG (1999). "The TFIIIC90 subunit of TFIIIC interacts with multiple components of the RNA polymerase III machinery and contains a histone-specific acetyltransferase activity". Mol. Cell. Biol. 19 (11): 7697–704. doi:10.1128/mcb.19.11.7697. PMC   84812 . PMID   10523658.
• Meissner W, Thomae R, Seifart KH (2002). "The activity of transcription factor IIIC1 is impaired during differentiation of F9 cells". J. Biol. Chem. 277 (9): 7148–56. doi: 10.1074/jbc.M108721200 . PMID   11741993.
• Zhan Y, Hegde R, Srinivasula SM, Fernandes-Alnemri T, Alnemri ES (2002). "Death effector domain-containing proteins DEDD and FLAME-3 form nuclear complexes with the TFIIIC102 subunit of human transcription factor IIIC". Cell Death Differ. 9 (4): 439–47. doi: 10.1038/sj.cdd.4401038 . PMID   11965497.
• Weser S, Riemann J, Seifart KH, Meissner W (2003). "Assembly and isolation of intermediate steps of transcription complexes formed on the human 5S rRNA gene". Nucleic Acids Res. 31 (9): 2408–16. doi:10.1093/nar/gkg345. PMC   154231 . PMID   12711686.
• Beausoleil SA, Jedrychowski M, Schwartz D, Elias JE, Villén J, Li J, Cohn MA, Cantley LC, Gygi SP (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi: 10.1073/pnas.0404720101 . PMC   514446 . PMID   15302935.
• Beausoleil SA, Villén J, Gerber SA, Rush J, Gygi SP (2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. Biotechnol. 24 (10): 1285–92. doi:10.1038/nbt1240. PMID   16964243. S2CID   14294292.
• Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi: 10.1016/j.cell.2006.09.026 . PMID   17081983. S2CID   7827573.
• Dumay-Odelot H, Marck C, Durrieu-Gaillard S, Lefebvre O, Jourdain S, Prochazkova M, Pflieger A, Teichmann M (2007). "Identification, molecular cloning, and characterization of the sixth subunit of human transcription factor TFIIIC". J. Biol. Chem. 282 (23): 17179–89. doi: 10.1074/jbc.M611542200 . PMID   17409385.

External links

• GTF3C1+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.