GTF2E2

GTF2E2
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1D8J, 1D8K, 5IY9, 5IYA, 5IYC, 5IYB, 5IY7, 5IY8, 5IYD, 5IY6
Identifiers
Aliases	GTF2E2 , FE, TF2E2, TFIIE-B, TTD6, general transcription factor IIE subunit 2
External IDs	OMIM: 189964; MGI: 1915403; HomoloGene: 37573; GeneCards: GTF2E2; OMA:GTF2E2 - orthologs
Gene location (Human) Chr. Chromosome 8 (human) [1] Band 8p12 Start 30,578,318 bp [1] End 30,658,236 bp [1]
Gene location (Mouse) Chr. Chromosome 8 (mouse) [2] Band 8|8 A4 Start 34,221,861 bp [2] End 34,267,201 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in body of pancreas right testis left testis Achilles tendon sperm gonad islet of Langerhans right adrenal gland right adrenal cortex stromal cell of endometrium Top expressed in otic placode saccule spermatid spermatocyte otic vesicle tail of embryo primitive streak somite genital tubercle abdominal wall More reference expression data BioGPS n/a
Gene ontology Molecular function DNA binding protein binding RNA binding TFIIH-class transcription factor complex binding RNA polymerase II general transcription initiation factor activity Cellular component nucleus transcription factor TFIIE complex nucleoplasm transcription factor TFIID complex cytosol nuclear speck Biological process transcription elongation from RNA polymerase II promoter transcription initiation from RNA polymerase II promoter regulation of transcription, DNA-templated transcription by RNA polymerase II transcription, DNA-templated snRNA transcription by RNA polymerase II Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 2961 68153 Ensembl ENSG00000197265 ENSMUSG00000031585 UniProt P29084 Q9D902 RefSeq (mRNA) NM_002095 NM_001348353 NM_001167921 NM_001167922 NM_026584 RefSeq (protein) NP_002086 NP_001335282 NP_001161393 NP_001161394 NP_080860 Location (UCSC) Chr 8: 30.58 – 30.66 Mb Chr 8: 34.22 – 34.27 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

General transcription factor IIE subunit 2 (GTF2E2), also known as transcription initiation factor IIE subunit beta (TFIIE-beta), is a protein that in humans is encoded by the GTF2E2 gene. ^[5]

See also

• Transcription factor II E

References

1. GRCh38: Ensembl release 89: ENSG00000197265 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000031585 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: general transcription factor IIE".

Further reading

• Jeronimo C, Forget D, Bouchard A, Li Q, Chua G, Poitras C, Thérien C, Bergeron D, Bourassa S, Greenblatt J, Chabot B, Poirier GG, Hughes TR, Blanchette M, Price DH, Coulombe B (July 2007). "Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme". Molecular Cell. 27 (2): 262–74. doi:10.1016/j.molcel.2007.06.027. PMC   4498903 . PMID   17643375.
• Tanaka A, Watanabe T, Iida Y, Hanaoka F, Ohkuma Y (March 2009). "Central forkhead domain of human TFIIE beta plays a primary role in binding double-stranded DNA at transcription initiation". Genes to Cells. 14 (3): 395–405. doi: 10.1111/j.1365-2443.2008.01278.x . PMID   19210545. S2CID   36600862.
• Kang SW, Kuzuhara T, Horikoshi M (April 2000). "Functional interaction of general transcription initiation factor TFIIE with general chromatin factor SPT16/CDC68". Genes to Cells. 5 (4): 251–63. doi: 10.1046/j.1365-2443.2000.00323.x . PMID   10792464. S2CID   33454256.
• Langelier MF, Forget D, Rojas A, Porlier Y, Burton ZF, Coulombe B (October 2001). "Structural and functional interactions of transcription factor (TF) IIA with TFIIE and TFIIF in transcription initiation by RNA polymerase II". The Journal of Biological Chemistry. 276 (42): 38652–7. doi: 10.1074/jbc.M106422200 . PMC   4492724 . PMID   11509574.
• Yamamoto S, Watanabe Y, van der Spek PJ, Watanabe T, Fujimoto H, Hanaoka F, Ohkuma Y (January 2001). "Studies of nematode TFIIE function reveal a link between Ser-5 phosphorylation of RNA polymerase II and the transition from transcription initiation to elongation". Molecular and Cellular Biology. 21 (1): 1–15. doi:10.1128/MCB.21.1.1-15.2001. PMC   86563 . PMID   11113176.
• Watanabe T, Hayashi K, Tanaka A, Furumoto T, Hanaoka F, Ohkuma Y (April 2003). "The carboxy terminus of the small subunit of TFIIE regulates the transition from transcription initiation to elongation by RNA polymerase II". Molecular and Cellular Biology. 23 (8): 2914–26. doi:10.1128/mcb.23.8.2914-2926.2003. PMC   152561 . PMID   12665589.
• Jawhari A, Uhring M, De Carlo S, Crucifix C, Tocchini-Valentini G, Moras D, Schultz P, Poterszman A (May 2006). "Structure and oligomeric state of human transcription factor TFIIE". EMBO Reports. 7 (5): 500–5. doi:10.1038/sj.embor.7400663. PMC   1479554 . PMID   16547462.
• Orphanides G, Lagrange T, Reinberg D (November 1996). "The general transcription factors of RNA polymerase II". Genes & Development. 10 (21): 2657–83. doi: 10.1101/gad.10.21.2657 . PMID   8946909.
• Kim TK, Ebright RH, Reinberg D (May 2000). "Mechanism of ATP-dependent promoter melting by transcription factor IIH". Science. 288 (5470): 1418–22. Bibcode:2000Sci...288.1418K. doi:10.1126/science.288.5470.1418. PMID   10827951.
• Ikeda K, Halle JP, Stelzer G, Meisterernst M, Kawakami K (January 1998). "Involvement of negative cofactor NC2 in active repression by zinc finger-homeodomain transcription factor AREB6". Molecular and Cellular Biology. 18 (1): 10–8. doi:10.1128/mcb.18.1.10. PMC   121442 . PMID   9418848.
• Holstege FC, Fiedler U, Timmers HT (December 1997). "Three transitions in the RNA polymerase II transcription complex during initiation". The EMBO Journal. 16 (24): 7468–80. doi:10.1093/emboj/16.24.7468. PMC   1170346 . PMID   9405375.
• Cirulli ET, Kasperaviciūte D, Attix DK, Need AC, Ge D, Gibson G, Goldstein DB (July 2010). "Common genetic variation and performance on standardized cognitive tests". European Journal of Human Genetics. 18 (7): 815–20. doi:10.1038/ejhg.2010.2. PMC   2987367 . PMID   20125193.
• Yu X, Li P, Roeder RG, Wang Z (July 2001). "Inhibition of androgen receptor-mediated transcription by amino-terminal enhancer of split". Molecular and Cellular Biology. 21 (14): 4614–25. doi:10.1128/MCB.21.14.4614-4625.2001. PMC   87125 . PMID   11416139.
• Yokomori K, Verrijzer CP, Tjian R (June 1998). "An interplay between TATA box-binding protein and transcription factors IIE and IIA modulates DNA binding and transcription". Proceedings of the National Academy of Sciences of the United States of America. 95 (12): 6722–7. Bibcode:1998PNAS...95.6722Y. doi: 10.1073/pnas.95.12.6722 . PMC   22611 . PMID   9618479.
• Liu L, Ishihara K, Ichimura T, Fujita N, Hino S, Tomita S, Watanabe S, Saitoh N, Ito T, Nakao M (February 2009). "MCAF1/AM is involved in Sp1-mediated maintenance of cancer-associated telomerase activity". The Journal of Biological Chemistry. 284 (8): 5165–74. doi: 10.1074/jbc.M807098200 . PMID   19106100.
• De Graeve F, Bahr A, Chatton B, Kedinger C (March 2000). "A murine ATFa-associated factor with transcriptional repressing activity". Oncogene. 19 (14): 1807–19. doi: 10.1038/sj.onc.1203492 . PMID   10777215.
• Okamoto T, Yamamoto S, Watanabe Y, Ohta T, Hanaoka F, Roeder RG, Ohkuma Y (July 1998). "Analysis of the role of TFIIE in transcriptional regulation through structure-function studies of the TFIIEbeta subunit". The Journal of Biological Chemistry. 273 (31): 19866–76. doi: 10.1074/jbc.273.31.19866 . PMID   9677423.
• Festen EA, Stokkers PC, van Diemen CC, van Bodegraven AA, Boezen HM, Crusius BJ, Hommes DW, van der Woude CJ, van der Woude JC, Balschun T, Verspaget HW, Schreiber S, de Jong DJ, Franke A, Dijkstra G, Wijmenga C, Weersma RK (February 2010). "Genetic analysis in a Dutch study sample identifies more ulcerative colitis susceptibility loci and shows their additive role in disease risk". The American Journal of Gastroenterology. 105 (2): 395–402. doi:10.1038/ajg.2009.576. PMID   19861958. S2CID   10250290.