Activating transcription factor 2

ATF2
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1BHI, 1T2K, 4H36
Identifiers
Aliases	ATF2 , CRE-BP1, CREB-2, CREB2, HB16, TREB7, activating transcription factor 2
External IDs	OMIM: 123811; MGI: 109349; HomoloGene: 31061; GeneCards: ATF2; OMA:ATF2 - orthologs
Gene location (Human) Chr. Chromosome 2 (human) [1] Band 2q31.1 Start 175,072,250 bp [1] End 175,168,382 bp [1]
Gene location (Mouse) Chr. Chromosome 2 (mouse) [2] Band 2|2 C3 Start 73,816,509 bp [2] End 73,892,639 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in endothelial cell germinal epithelium Brodmann area 23 corpus epididymis caput epididymis mucosa of paranasal sinus pars compacta tail of epididymis ganglionic eminence Epithelium of choroid plexus Top expressed in paraventricular nucleus of hypothalamus medial dorsal nucleus dorsomedial hypothalamic nucleus habenula arcuate nucleus ventral tegmental area olfactory tubercle lateral septal nucleus anterior amygdaloid area subiculum More reference expression data BioGPS More reference expression data
Gene ontology Molecular function transferase activity RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA binding sequence-specific DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cAMP response element binding protein binding DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific transcription coactivator activity chromatin binding metal ion binding protein binding cis-regulatory region sequence-specific DNA binding nucleic acid binding transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding protein kinase binding cAMP response element binding histone acetyltransferase activity DNA-binding transcription factor activity, RNA polymerase II-specific transcription factor binding protein heterodimerization activity Cellular component cytoplasm membrane nucleoplasm mitochondrial outer membrane mitochondrion nucleus site of double-strand break Biological process regulation of transcription, DNA-templated regulation of transcription by RNA polymerase II mitotic intra-S DNA damage checkpoint signaling outflow tract morphogenesis response to water deprivation positive regulation of DNA-binding transcription factor activity negative regulation of transcription by RNA polymerase II transcription by RNA polymerase II positive regulation of transforming growth factor beta2 production transcription, DNA-templated cellular response to DNA damage stimulus response to osmotic stress positive regulation of neuron apoptotic process regulation of DNA-binding transcription factor activity positive regulation of mitochondrial membrane permeability involved in apoptotic process negative regulation of epithelial cell proliferation adipose tissue development fat cell differentiation positive regulation of transcription by RNA polymerase II amelogenesis histone acetylation positive regulation of cardiac muscle myoblast proliferation positive regulation of gene expression negative regulation of angiogenesis Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 1386 11909 Ensembl ENSG00000115966 ENSMUSG00000027104 UniProt P15336 P16951 RefSeq (mRNA) NM_001256090 NM_001256091 NM_001256092 NM_001256093 NM_001256094 NM_001880 NM_001025093 NM_001284369 NM_001284370 NM_001284371 NM_001284372 NM_001284373 NM_001284374 NM_001284376 NM_009715 RefSeq (protein) NP_001243019 NP_001243020 NP_001243021 NP_001243022 NP_001243023 NP_001871 NP_001020264 NP_001271298 NP_001271299 NP_001271300 NP_001271301 NP_001271302 NP_001271303 NP_001271305 NP_033845 Location (UCSC) Chr 2: 175.07 – 175.17 Mb Chr 2: 73.82 – 73.89 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Activating transcription factor 2, also known as ATF2, is a protein that, in humans, is encoded by the ATF2 gene. ^[5]

Function

This gene encodes a transcription factor that is a member of the leucine zipper family of DNA-binding proteins. This protein binds to the cAMP-responsive element (CRE), an octameric palindrome. The protein forms a homodimer or heterodimer with c-Jun. The protein is also a histone acetyltransferase (HAT) that specifically acetylates histones H2B and H4 in vitro; thus, it may represent a class of sequence-specific factors that activate transcription by direct effects on chromatin components. Additional transcript variants have been identified but their biological validity has not been determined. ^[5]

The gene atf2 is located at human chromosome 2q32. ^[6] The protein ATF-2 has 505 amino acids. Studies in mice indicate a role for ATF-2 in the development of nervous system and the skeleton. ^[7] ATF-2 is normally activated in response to signals that converge on stress-activated protein kinases p38 and JNK. ^[8] ATF-2 phosphorylation in response to treatment of cells with tumor promoter phorbol ester has been demonstrated. ^[9]

Several studies implicate abnormal activation of ATF-2 in growth and progression of mammalian skin tumors. ^{[10] [11]} ATF-2 may mediate oncogenesis caused by mutant Ras protein ^[12] and regulate maintenance of the aggressive cancer phenotype of some types of epithelial cells.

ATF2 has also been shown to be phosphorylated at its C-terminal (serine 472 and 480 in mouse; serine 490 and 498 in human) by ATM upon double-stranded breaks. ^[13] Mice with mutations of these two serines are sensitive to irradiation and easier to tumorigenesis under p53 knockout background.

Interactions

Activating transcription factor 2 has been shown to interact with

• C-jun, ^{[14] [15] [16]}
• Casein kinase 2, alpha 1, ^[17]
• CREB binding protein, ^[18]
• CSNK2A2, ^[17]
• JDP2, ^[19]
• MAPK14, ^{[20] [21] [22]}
• MAPK8, ^{[20] [21] [22] [23]}
• Mothers against decapentaplegic homolog 3 ^[24]
• NCOA6, ^[25]
• RUVBL2, ^[26]
• UBE2I. ^[27]

See also

• Activating transcription factor

References

1. GRCh38: Ensembl release 89: ENSG00000115966 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000027104 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: ATF2 activating transcription factor 2".
6. Ozawa K, Sudo T, Soeda E, Yoshida MC, Ishii S (1991). "Assignment of the human CREB2 (CRE-BP1) gene to 2q32". Genomics. 10 (4): 1103–4. doi:10.1016/0888-7543(91)90210-6. PMID   1833307.
7. Reimold AM, Grusby MJ, Kosaras B, Fries JW, Mori R, Maniwa S, Clauss IM, Collins T, Sidman RL, Glimcher MJ, Glimcher LH (1996). "Chondrodysplasia and neurological abnormalities in ATF-2-deficient mice". Nature. 379 (6562): 262–5. Bibcode:1996Natur.379..262R. doi:10.1038/379262a0. PMID   8538792. S2CID   4326412.
8. Gupta S, Campbell D, Dérijard B, Davis RJ (1995). "Transcription factor ATF2 regulation by the JNK signal transduction pathway". Science. 267 (5196): 389–93. Bibcode:1995Sci...267..389G. doi:10.1126/science.7824938. PMID   7824938. S2CID   40268838.
9. Yamasaki T, Takahashi A, Pan J, Yamaguchi N, Yokoyama KK (March 2009). "Phosphorylation of Activation Transcription Factor-2 at Serine 121 by Protein Kinase C Controls c-Jun-mediated Activation of Transcription". J. Biol. Chem. 284 (13): 8567–81. doi: 10.1074/jbc.M808719200 . PMC   2659215 . PMID   19176525.
10. Leslie MC, Bar-Eli M (2005). "Regulation of gene expression in melanoma: new approaches for treatment". J. Cell. Biochem. 94 (1): 25–38. doi:10.1002/jcb.20296. PMID   15523674. S2CID   23515325.
11. Papassava P, Gorgoulis VG, Papaevangeliou D, Vlahopoulos S, van Dam H, Zoumpourlis V (2004). "Overexpression of activating transcription factor-2 is required for tumor growth and progression in mouse skin tumors". Cancer Res. 64 (23): 8573–84. doi:10.1158/0008-5472.CAN-03-0955. PMID   15574764. S2CID   14845890.
12. Vlahopoulos SA, Logotheti S, Mikas D, Giarika A, Gorgoulis V, Zoumpourlis V (17 March 2008). "The role of ATF-2 in oncogenesis". BioEssays. 30 (4): 314–27. doi:10.1002/bies.20734. PMID   18348191. S2CID   678541.
13. Bhoumik A, Takahashi S, Breitweiser W, Shiloh Y, Jones N, Ronai Z (May 2005). "ATM-dependent phosphorylation of ATF2 is required for the DNA damage response". Mol. Cell. 18 (5): 577–87. doi:10.1016/j.molcel.2005.04.015. PMC   2954254 . PMID   15916964.
14. Newell CL, Deisseroth AB, Lopez-Berestein G (July 1994). "Interaction of nuclear proteins with an AP-1/CRE-like promoter sequence in the human TNF-alpha gene". J. Leukoc. Biol. 56 (1): 27–35. doi:10.1002/jlb.56.1.27. PMID   8027667. S2CID   85570533.
15. Kara CJ, Liou HC, Ivashkiv LB, Glimcher LH (April 1990). "A cDNA for a human cyclic AMP response element-binding protein which is distinct from CREB and expressed preferentially in brain". Mol. Cell. Biol. 10 (4): 1347–57. doi:10.1128/MCB.10.4.1347. PMC   362236 . PMID   2320002.
16. Hai T, Curran T (May 1991). "Cross-family dimerization of transcription factors Fos/Jun and ATF/CREB alters DNA binding specificity". Proc. Natl. Acad. Sci. U.S.A. 88 (9): 3720–4. Bibcode:1991PNAS...88.3720H. doi: 10.1073/pnas.88.9.3720 . PMC   51524 . PMID   1827203.
17. Yamaguchi Y, Wada T, Suzuki F, Takagi T, Hasegawa J, Handa H (August 1998). "Casein kinase II interacts with the bZIP domains of several transcription factors". Nucleic Acids Res. 26 (16): 3854–61. doi:10.1093/nar/26.16.3854. PMC   147779 . PMID   9685505.
18. Sano Y, Tokitou F, Dai P, Maekawa T, Yamamoto T, Ishii S (October 1998). "CBP alleviates the intramolecular inhibition of ATF-2 function". J. Biol. Chem. 273 (44): 29098–105. doi: 10.1074/jbc.273.44.29098 . PMID   9786917.
19. Murata T, Shinozuka Y, Obata Y, Yokoyama KK (May 2008). "Phosphorylation of two eukaryotic transcription factors, Jun dimerization protein 2 and activation transcription factor 2, in Escherichia coli by Jun N-terminal kinase 1". Anal. Biochem. 376 (1): 115–21. doi:10.1016/j.ab.2008.01.038. PMID   18307971.
20. Raingeaud J, Gupta S, Rogers JS, Dickens M, Han J, Ulevitch RJ, Davis RJ (March 1995). "Pro-inflammatory cytokines and environmental stress cause p38 mitogen-activated protein kinase activation by dual phosphorylation on tyrosine and threonine". J. Biol. Chem. 270 (13): 7420–6. doi: 10.1074/jbc.270.13.7420 . PMID   7535770.
21. Chen Z, Cobb MH (May 2001). "Regulation of stress-responsive mitogen-activated protein (MAP) kinase pathways by TAO2". J. Biol. Chem. 276 (19): 16070–5. doi: 10.1074/jbc.M100681200 . PMID   11279118.
22. Tournier C, Whitmarsh AJ, Cavanagh J, Barrett T, Davis RJ (July 1997). "Mitogen-activated protein kinase kinase 7 is an activator of the c-Jun NH2-terminal kinase". Proc. Natl. Acad. Sci. U.S.A. 94 (14): 7337–42. Bibcode:1997PNAS...94.7337T. doi: 10.1073/pnas.94.14.7337 . PMC   23822 . PMID   9207092.
23. Fuchs SY, Xie B, Adler V, Fried VA, Davis RJ, Ronai Z (December 1997). "c-Jun NH2-terminal kinases target the ubiquitination of their associated transcription factors". J. Biol. Chem. 272 (51): 32163–8. doi: 10.1074/jbc.272.51.32163 . PMID   9405416.
24. Sano Y, Harada J, Tashiro S, Gotoh-Mandeville R, Maekawa T, Ishii S (March 1999). "ATF-2 is a common nuclear target of Smad and TAK1 pathways in transforming growth factor-beta signaling". J. Biol. Chem. 274 (13): 8949–57. doi: 10.1074/jbc.274.13.8949 . PMID   10085140.
25. Hong S, Choi HM, Park MJ, Kim YH, Choi YH, Kim HH, Choi YH, Cheong J (April 2004). "Activation and interaction of ATF2 with the coactivator ASC-2 are responsive for granulocytic differentiation by retinoic acid". J. Biol. Chem. 279 (17): 16996–7003. doi: 10.1074/jbc.M311752200 . PMID   14734562.
26. Cho SG, Bhoumik A, Broday L, Ivanov V, Rosenstein B, Ronai Z (December 2001). "TIP49b, a regulator of activating transcription factor 2 response to stress and DNA damage". Mol. Cell. Biol. 21 (24): 8398–413. doi:10.1128/MCB.21.24.8398-8413.2001. PMC   100004 . PMID   11713276.
27. Firestein R, Feuerstein N (March 1998). "Association of activating transcription factor 2 (ATF2) with the ubiquitin-conjugating enzyme hUBC9. Implication of the ubiquitin/proteasome pathway in regulation of ATF2 in T cells". J. Biol. Chem. 273 (10): 5892–902. doi: 10.1074/jbc.273.10.5892 . PMID   9488727.

External links

• Human ATF2 genome location and ATF2 gene details page in the UCSC Genome Browser .

Further reading

• Denys H, Desmet R, Stragier M, Vergison R, Lemahieu SF (1977). "Cystitis emphysematosa". Acta Urol Belg. 45 (4): 327–31. PMID   602896.
• Kim SJ, Wagner S, Liu F, O'Reilly MA, Robbins PD, Green MR (1992). "Retinoblastoma gene product activates expression of the human TGF-beta 2 gene through transcription factor ATF-2". Nature. 358 (6384): 331–4. Bibcode:1992Natur.358..331K. doi:10.1038/358331a0. PMID   1641004. S2CID   9770957.
• Hai T, Curran T (1991). "Cross-family dimerization of transcription factors Fos/Jun and ATF/CREB alters DNA binding specificity". Proc. Natl. Acad. Sci. U.S.A. 88 (9): 3720–4. Bibcode:1991PNAS...88.3720H. doi: 10.1073/pnas.88.9.3720 . PMC   51524 . PMID   1827203.
• Hoeffler JP, Lustbader JW, Chen CY (1991). "Identification of multiple nuclear factors that interact with cyclic adenosine 3',5'-monophosphate response element-binding protein and activating transcription factor-2 by protein-protein interactions". Mol. Endocrinol. 5 (2): 256–66. doi: 10.1210/mend-5-2-256 . PMID   1828107.
• Ozawa K, Sudo T, Soeda E, Yoshida MC, Ishii S (1991). "Assignment of the human CREB2 (CRE-BP1) gene to 2q32". Genomics. 10 (4): 1103–4. doi:10.1016/0888-7543(91)90210-6. PMID   1833307.
• Diep A, Li C, Klisak I, Mohandas T, Sparkes RS, Gaynor R, Lusis AJ (1991). "Assignment of the gene for cyclic AMP-response element binding protein 2 (CREB2) to human chromosome 2q24.1-q32". Genomics. 11 (4): 1161–3. doi:10.1016/0888-7543(91)90047-I. PMID   1838349.
• Kara CJ, Liou HC, Ivashkiv LB, Glimcher LH (1990). "A cDNA for a human cyclic AMP response element-binding protein which is distinct from CREB and expressed preferentially in brain". Mol. Cell. Biol. 10 (4): 1347–57. doi:10.1128/MCB.10.4.1347. PMC   362236 . PMID   2320002.
• Gonzalez GA, Yamamoto KK, Fischer WH, Karr D, Menzel P, Biggs W, Vale WW, Montminy MR (1989). "A cluster of phosphorylation sites on the cyclic AMP-regulated nuclear factor CREB predicted by its sequence". Nature. 337 (6209): 749–52. Bibcode:1989Natur.337..749G. doi:10.1038/337749a0. PMID   2521922. S2CID   4345950.
• Maekawa T, Sakura H, Kanei-Ishii C, Sudo T, Yoshimura T, Fujisawa J, Yoshida M, Ishii S (1989). "Leucine zipper structure of the protein CRE-BP1 binding to the cyclic AMP response element in brain". EMBO J. 8 (7): 2023–8. doi:10.1002/j.1460-2075.1989.tb03610.x. PMC   401081 . PMID   2529117.
• Raingeaud J, Gupta S, Rogers JS, Dickens M, Han J, Ulevitch RJ, Davis RJ (1995). "Pro-inflammatory cytokines and environmental stress cause p38 mitogen-activated protein kinase activation by dual phosphorylation on tyrosine and threonine". J. Biol. Chem. 270 (13): 7420–6. doi: 10.1074/jbc.270.13.7420 . PMID   7535770.
• Livingstone C, Patel G, Jones N (1995). "ATF-2 contains a phosphorylation-dependent transcriptional activation domain". EMBO J. 14 (8): 1785–97. doi:10.1002/j.1460-2075.1995.tb07167.x. PMC   398272 . PMID   7737129.
• van Dam H, Wilhelm D, Herr I, Steffen A, Herrlich P, Angel P (1995). "ATF-2 is preferentially activated by stress-activated protein kinases to mediate c-jun induction in response to genotoxic agents". EMBO J. 14 (8): 1798–811. doi:10.1002/j.1460-2075.1995.tb07168.x. PMC   398273 . PMID   7737130.
• Zhou Q, Gedrich RW, Engel DA (1995). "Transcriptional repression of the c-fos gene by YY1 is mediated by a direct interaction with ATF/CREB". J. Virol. 69 (7): 4323–30. doi:10.1128/JVI.69.7.4323-4330.1995. PMC   189172 . PMID   7769693.
• Newell CL, Deisseroth AB, Lopez-Berestein G (1994). "Interaction of nuclear proteins with an AP-1/CRE-like promoter sequence in the human TNF-alpha gene". J. Leukoc. Biol. 56 (1): 27–35. doi:10.1002/jlb.56.1.27. PMID   8027667. S2CID   85570533.
• Nomura N, Zu YL, Maekawa T, Tabata S, Akiyama T, Ishii S (1993). "Isolation and characterization of a novel member of the gene family encoding the cAMP response element-binding protein CRE-BP1". J. Biol. Chem. 268 (6): 4259–66. doi: 10.1016/S0021-9258(18)53604-8 . PMID   8440710.
• Martin ML, Lieberman PM, Curran T (1996). "Fos-Jun dimerization promotes interaction of the basic region with TFIIE-34 and TFIIF". Mol. Cell. Biol. 16 (5): 2110–8. doi:10.1128/mcb.16.5.2110. PMC   231198 . PMID   8628277.
• Yang L, Lanier ER, Kraig E (1997). "Identification of a novel, spliced variant of CREB that is preferentially expressed in the thymus". J. Immunol. 158 (6): 2522–5. doi: 10.4049/jimmunol.158.6.2522 . PMID   9058782. S2CID   29299351.
• Shuman JD, Cheong J, Coligan JE (1997). "ATF-2 and C/EBPalpha can form a heterodimeric DNA binding complex in vitro. Functional implications for transcriptional regulation". J. Biol. Chem. 272 (19): 12793–800. doi: 10.1074/jbc.272.19.12793 . PMID   9139739.
• Fukunaga R, Hunter T (1997). "MNK1, a new MAP kinase-activated protein kinase, isolated by a novel expression screening method for identifying protein kinase substrates". EMBO J. 16 (8): 1921–33. doi:10.1093/emboj/16.8.1921. PMC   1169795 . PMID   9155018.
• Kumar S, McDonnell PC, Gum RJ, Hand AT, Lee JC, Young PR (1997). "Novel homologues of CSBP/p38 MAP kinase: activation, substrate specificity and sensitivity to inhibition by pyridinyl imidazoles". Biochem. Biophys. Res. Commun. 235 (3): 533–8. Bibcode:1997BBRC..235..533K. doi:10.1006/bbrc.1997.6849. PMID   9207191.

External links

• PDBe-KB provides an overview of all the structure information available in the PDB for Human Cyclic AMP-dependent transcription factor ATF-2