PHF3

PHF3
Available structures PDB Human UniProt search: PDBe RCSB List of PDB id codes 2DME
Identifiers
Aliases	PHF3 , PHD finger protein 3
External IDs	OMIM: 607789 MGI: 2446126 HomoloGene: 9040 GeneCards: PHF3
Gene location (Human) Chr. Chromosome 6 (human) [1] Band 6q12 Start 63,635,802 bp [1] End 63,779,336 bp [1]
Gene location (Mouse) Chr. Chromosome 1 (mouse) [2] Band 1|1 A5- B Start 30,841,420 bp [2] End 30,913,002 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in Achilles tendon germinal epithelium tibia endothelial cell parietal pleura internal globus pallidus visceral pleura corpus callosum palpebral conjunctiva caput epididymis Top expressed in secondary oocyte renal corpuscle left lung lobe cumulus cell maxillary prominence ciliary body retinal pigment epithelium conjunctival fornix pituitary gland medullary collecting duct More reference expression data BioGPS More reference expression data
Gene ontology Molecular function metal ion binding molecular function Cellular component cellular component Biological process multicellular organism development transcription, DNA-templated Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 23469 213109 Ensembl ENSG00000118482 ENSMUSG00000048874 UniProt Q92576 n/a RefSeq (mRNA) NM_001290259 NM_001290260 NM_015153 NM_001370348 NM_001370349 NM_001370350 NM_001081080 NM_025871 RefSeq (protein) NP_001277188 NP_001277189 NP_055968 NP_001357277 NP_001357278 NP_001357279 n/a Location (UCSC) Chr 6: 63.64 – 63.78 Mb Chr 1: 30.84 – 30.91 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

PHD finger protein 3 is a protein that in humans is encoded by the PHF3 gene. ^{[5] [6]}

References

1. GRCh38: Ensembl release 89: ENSG00000118482 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000048874 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Fischer U, Struss AK, Hemmer D, Michel A, Henn W, Steudel WI, Meese E (Mar 2002). "PHF3 expression is frequently reduced in glioma". Cytogenet Cell Genet. 94 (3–4): 131–6. doi:10.1159/000048804. PMID   11856869. S2CID   44396216.
6. "Entrez Gene: PHF3 PHD finger protein 3".

Further reading

• Nakajima D, Okazaki N, Yamakawa H, et al. (2003). "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones". DNA Res. 9 (3): 99–106. doi: 10.1093/dnares/9.3.99 . PMID   12168954.
• Nagase T, Seki N, Ishikawa K, et al. (1997). "Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain". DNA Res. 3 (5): 321–9, 341–54. doi: 10.1093/dnares/3.5.321 . PMID   9039502.
• Struss AK, Romeike BF, Munnia A, et al. (2001). "PHF3-specific antibody responses in over 60% of patients with glioblastoma multiforme". Oncogene. 20 (31): 4107–14. doi: 10.1038/sj.onc.1204552 . PMID   11464277.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Mungall AJ, Palmer SA, Sims SK, et al. (2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805–11. Bibcode:2003Natur.425..805M. doi: 10.1038/nature02055 . PMID   14574404.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi: 10.1073/pnas.0404720101 . PMC   514446 . PMID   15302935.
• Ballif BA, Villén J, Beausoleil SA, et al. (2005). "Phosphoproteomic analysis of the developing mouse brain". Mol. Cell. Proteomics. 3 (11): 1093–101. doi: 10.1074/mcp.M400085-MCP200 . PMID   15345747.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Pallasch CP, Struss AK, Munnia A, et al. (2005). "Autoantibodies against GLEA2 and PHF3 in glioblastoma: tumor-associated autoantibodies correlated with prolonged survival". Int. J. Cancer. 117 (3): 456–9. doi: 10.1002/ijc.20929 . PMID   15906353. S2CID   32083805.
• Beausoleil SA, Villén J, Gerber SA, et al. (2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. Biotechnol. 24 (10): 1285–92. doi:10.1038/nbt1240. PMID   16964243. S2CID   14294292.
• Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi: 10.1016/j.cell.2006.09.026 . PMID   17081983. S2CID   7827573.

External links

• PHF3+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.