RFX5

Last updated
RFX5
Available structures
PDB Human UniProt search: PDBe RCSB
Identifiers
Aliases RFX5 , regulatory factor X5
External IDs OMIM: 601863 HomoloGene: 388 GeneCards: RFX5
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_000449
NM_001025603

n/a

RefSeq (protein)

n/a

Location (UCSC) Chr 1: 151.34 – 151.35 Mb n/a
PubMed search [2] n/a
Wikidata
View/Edit Human

DNA-binding protein RFX5 is a protein that in humans is encoded by the RFX5 gene. [3] [4]

Function

A lack of MHC-II expression results in a severe immunodeficiency syndrome called MHC-II deficiency, or the bare lymphocyte syndrome (BLS; MIM 209920). At least 4 complementation groups have been identified in B-cell lines established from patients with BLS. The molecular defects in complementation groups B, C, and D all lead to a deficiency in RFX, a nuclear protein complex that binds to the Xbox of MHC-II promoters. The lack of RFX binding activity in complementation group C results from mutations in the RFX5 gene encoding the 75-kD subunit of RFX (Steimle et al., 1995). RFX5 is the fifth member of the growing family of DNA-binding proteins sharing a novel and highly characteristic DNA-binding domain called the RFX motif. Multiple alternatively spliced transcript variants have been found but the full-length natures of only two have been determined. [4]

Interactions

RFX5 has been shown to interact with CIITA. [5] [6]

Related Research Articles

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<span class="mw-page-title-main">Bare lymphocyte syndrome type II</span> Medical condition

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<span class="mw-page-title-main">Bare lymphocyte syndrome</span> Medical condition

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<span class="mw-page-title-main">CIITA</span> Protein-coding gene in humans

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<span class="mw-page-title-main">RFX1</span> Protein-coding gene in the species Homo sapiens

MHC class II regulatory factor RFX1 is a protein that, in humans, is encoded by the RFX1 gene located on the short arm of chromosome 19.

<span class="mw-page-title-main">RFXANK</span> Protein-coding gene in the species Homo sapiens

DNA-binding protein RFXANK is a protein that in humans is encoded by the RFXANK gene.

<span class="mw-page-title-main">RFXAP</span> Protein-coding gene in the species Homo sapiens

Regulatory factor X-associated protein is a protein that in humans is encoded by the RFXAP gene.

<span class="mw-page-title-main">ARID2</span> Protein-coding gene in humans

AT-rich interactive domain-containing protein 2 (ARID2) is a protein that in humans is encoded by the ARID2 gene.

<span class="mw-page-title-main">RFX2</span> Protein-coding gene in the species Homo sapiens

DNA-binding protein RFX2 is a protein that in humans is encoded by the RFX2 gene.

<span class="mw-page-title-main">RFX4</span> Protein-coding gene in the species Homo sapiens

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<span class="mw-page-title-main">NFX1</span> Protein-coding gene in the species Homo sapiens

Transcriptional repressor NF-X1 is a protein that in humans is encoded by the NFX1 gene.

<span class="mw-page-title-main">RFX3</span> Protein-coding gene in the species Homo sapiens

Transcription factor RFX3 is a protein that in humans is encoded by the RFX3 gene.

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The Emberger syndrome is a rare, autosomal dominant, genetic disorder caused by familial or sporadic inactivating mutations in one of the two parental GATA2 genes. The mutation results in a haploinsufficiency in the levels of the gene's product, the GATA2 transcription factor. This transcription factor is critical for the embryonic development, maintenance, and functionality of blood-forming, lympathic-forming, and other tissues. The syndrome includes as its primary symptoms: serious abnormalities of the blood such as the myelodysplastic syndrome and acute myeloid leukemia; lymphedema of the lower limbs, and sensorineural hearing loss. However, the anomalies caused by GATA2 mutations are highly variable with some individuals showing little or no such symptoms even in old age while others exhibit non-malignant types of hematological anomalies; lymphedema in areas besides the lower limbs, little or no hearing loss; or anomalies in other tissues. The syndrome may present with relatively benign signs and/or symptoms and then progress rapidly or slowly to the myelodysplastic syndrome and/or acute myeloid leukemia. Alternatively, it may present with one of the latter two life-threatening disorders.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000143390 - Ensembl, May 2017
  2. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. Villard J, Reith W, Barras E, Gos A, Morris MA, Antonarakis SE, Van den Elsen PJ, Mach B (January 1998). "Analysis of mutations and chromosomal localisation of the gene encoding RFX5, a novel transcription factor affected in major histocompatibility complex class II deficiency". Human Mutation. 10 (6): 430–5. doi:10.1002/(SICI)1098-1004(1997)10:6<430::AID-HUMU3>3.0.CO;2-H. PMID   9401005. S2CID   41660134.
  4. 1 2 "Entrez Gene: RFX5 regulatory factor X, 5 (influences HLA class II expression)".
  5. Hake SB, Masternak K, Kammerbauer C, Janzen C, Reith W, Steimle V (Oct 2000). "CIITA leucine-rich repeats control nuclear localization, in vivo recruitment to the major histocompatibility complex (MHC) class II enhanceosome, and MHC class II gene transactivation". Molecular and Cellular Biology. 20 (20): 7716–25. doi:10.1128/MCB.20.20.7716-7725.2000. PMC   86349 . PMID   11003667.
  6. Scholl T, Mahanta SK, Strominger JL (Jun 1997). "Specific complex formation between the type II bare lymphocyte syndrome-associated transactivators CIITA and RFX5". Proceedings of the National Academy of Sciences of the United States of America. 94 (12): 6330–4. Bibcode:1997PNAS...94.6330S. doi: 10.1073/pnas.94.12.6330 . PMC   21049 . PMID   9177217.

Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.