HOXC6

Last updated
HOXC6
Protein HOXC6 PDB 1ahd.png
Identifiers
Aliases HOXC6 , CP25, HHO.C8, HOX3, HOX3C, homeobox C6
External IDs OMIM: 142972 MGI: 96197 HomoloGene: 19533 GeneCards: HOXC6
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_153693
NM_004503

NM_010465

RefSeq (protein)

NP_004494
NP_710160

NP_034595

Location (UCSC) Chr 12: 53.99 – 54.03 Mb Chr 15: 102.91 – 102.92 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Homeobox protein Hox-C6 is a protein that in humans is encoded by the HOXC6 gene. [5] [6] [7] Hox-C6 expression is highest in the fallopian tube and ovary. [8] HoxC6 has been highly expressed in many types of cancers including prostate, breast, and esophageal squamous cell cancer. [9]

Contents

Function

This gene belongs to the homeobox family, members of which encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, which are located on different chromosomes and consist of 9 to 11 genes arranged in tandem. This gene, HOXC6, is one of several HOXC genes located in a cluster on chromosome 12. Three genes, HOXC5, HOXC4 and HOXC6, share a 5' non-coding exon. Transcripts may include the shared exon spliced to the gene-specific exons, or they may include only the gene-specific exons. Alternatively spliced transcript variants encoding different isoforms have been identified for HOXC6. Transcript variant two includes the shared exon, and transcript variant one includes only gene-specific exons. [7] HOXC6 plays a role in lymphoma. The HOXC6 isoform, HOXC6-2 is an active carcinogenic  for gastric cancer. It stimulates gastric cancer cells proliferation by acting as an oncogene. Downregulation of this gene’s isoforms could potentially lead to less proliferation of certain cancerous cells. With the HOXC6-1 isoform, there were no statistically significant effects on migration, invasion, apoptosis, or proliferation when it was downregulated. [10] According to a study in Cancer Cell International, suppression of the HOXC6 gene plays a role in blocking the TGF-β/SMAD cascade. This then leads to the weakening of epithelial to mesenchymal transition for the cervical carcinoma. [11]

Knock-out model

A knockout model using small interfering RNA showed that knockout of HOXC6 was associated with apoptosis. Additionally, the presence of HOXC6 was associated with inhibition of paclitaxel-induced apoptosis. Thus, HOXC6 was demonstrated to induce proliferative activity. [12]

See also


Related Research Articles

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<span class="mw-page-title-main">HOXB3</span> Protein-coding gene in the species Homo sapiens

Homeobox protein Hox-B3 is a protein that in humans is encoded by the HOXB3 gene.

<span class="mw-page-title-main">HOXC4</span> Protein-coding gene in the species Homo sapiens

Homeobox protein Hox-C4 is a protein that in humans is encoded by the HOXC4 gene.

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Homeobox protein Hox-D4 is a protein that in humans is encoded by the HOXD4 gene.

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Homeobox protein Hox-C13 is a protein that in humans is encoded by the HOXC13 gene.

<span class="mw-page-title-main">HOXB8</span> Protein-coding gene in the species Homo sapiens

Homeobox protein Hox-B8 is a protein that in humans is encoded by the HOXB8 gene.

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Homeobox protein Hox-C9 is a protein that in humans is encoded by the HOXC9 gene.

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Homeobox protein Hox-C10 is a protein that in humans is encoded by the HOXC10 gene.

<span class="mw-page-title-main">HOXC11</span> Protein-coding gene in the species Homo sapiens

Homeobox protein Hox-C11 is a protein that in humans is encoded by the HOXC11 gene.

<span class="mw-page-title-main">HOXC12</span> Protein-coding gene in the species Homo sapiens

Homeobox C12 is a protein that in humans is encoded by the HOXC12 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000197757 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000001661 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. McAlpine PJ, Shows TB (July 1990). "Nomenclature for human homeobox genes". Genomics. 7 (3): 460. doi:10.1016/0888-7543(90)90186-X. PMID   1973146.
  6. Scott MP (November 1992). "Vertebrate homeobox gene nomenclature". Cell. 71 (4): 551–553. doi:10.1016/0092-8674(92)90588-4. PMID   1358459. S2CID   13370372.
  7. 1 2 "Entrez Gene: HOXC6 homeobox C6".
  8. "Tissue expression of HOXC6 - Summary - The Human Protein Atlas". www.proteinatlas.org. Retrieved 2022-04-11.
  9. Tang L, Cao Y, Song X, Wang X, Li Y, Yu M, et al. (2019-03-14). "HOXC6 promotes migration, invasion and proliferation of esophageal squamous cell carcinoma cells via modulating expression of genes involved in malignant phenotypes". PeerJ. 7: e6607. doi:10.7717/peerj.6607. PMC   6421064 . PMID   30886783.
  10. Lin J, He J, He X, Wang L, Xue M, Zhuo W, et al. (October 2020). "HoxC6 Functions as an Oncogene and Isoform HoxC6-2 May Play the Primary Role in Gastric Carcinogenesis". Digestive Diseases and Sciences. 65 (10): 2896–2906. doi:10.1007/s10620-019-06013-7. PMID   31900716. S2CID   209541406.
  11. Zhang F, Ren CC, Liu L, Chen YN, Yang L, Zhang XA (December 2018). "HOXC6 gene silencing inhibits epithelial-mesenchymal transition and cell viability through the TGF-β/smad signaling pathway in cervical carcinoma cells". Cancer Cell International. 18 (1): 204. doi:10.1186/s12935-018-0680-2. PMC   6290547 . PMID   30559605.
  12. Moon SM, Kim SA, Yoon JH, Ahn SG (October 2012). "HOXC6 is deregulated in human head and neck squamous cell carcinoma and modulates Bcl-2 expression". The Journal of Biological Chemistry. 287 (42): 35678–35688. doi: 10.1074/jbc.M112.361675 . PMC   3471680 . PMID   22896703.

Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.