Zinc finger and BTB domain-containing protein 16

ZBTB16
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1BUO, 1CS3
Identifiers
Aliases	ZBTB16 , PLZF, ZNF145, zinc finger and BTB domain containing 16
External IDs	OMIM: 176797; MGI: 103222; HomoloGene: 21214; GeneCards: ZBTB16; OMA:ZBTB16 - orthologs
Gene location (Human) Chr. Chromosome 11 (human) [1] Band 11q23.2 Start 114,059,041 bp [1] End 114,256,765 bp [1]
Gene location (Mouse) Chr. Chromosome 9 (mouse) [2] Band 9 A5.3|9 26.47 cM Start 48,565,597 bp [2] End 48,747,522 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in skin of hip Brodmann area 23 tibialis anterior muscle Skeletal muscle tissue of rectus abdominis pericardium saphenous vein skin of thigh deltoid muscle biceps brachii Skeletal muscle tissue of biceps brachii Top expressed in extensor digitorum longus muscle plantaris muscle digastric muscle extraocular muscle aortic valve gastrula muscle of thigh ankle thoracic diaphragm soleus muscle More reference expression data BioGPS More reference expression data
Gene ontology Molecular function RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA binding protein homodimerization activity DNA-binding transcription factor activity metal ion binding DNA-binding transcription repressor activity, RNA polymerase II-specific protein binding identical protein binding nucleic acid binding double-stranded DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific protein C-terminus binding protein domain specific binding sequence-specific DNA binding Cellular component PML body nuclear speck nuclear body plasma membrane transcription repressor complex nucleus cytosol protein-containing complex nucleoplasm Biological process embryonic hindlimb morphogenesis forelimb morphogenesis skeletal system development myeloid cell differentiation regulation of transcription, DNA-templated embryonic pattern specification embryonic digit morphogenesis positive regulation of ossification negative regulation of transcription by RNA polymerase II hindlimb morphogenesis transcription, DNA-templated mesonephros development positive regulation of transcription, DNA-templated central nervous system development cartilage development male germ-line stem cell asymmetric division positive regulation of cartilage development protein ubiquitination positive regulation of chondrocyte differentiation positive regulation of apoptotic process protein localization to nucleus positive regulation of NK T cell differentiation negative regulation of transcription, DNA-templated positive regulation of fat cell differentiation negative regulation of myeloid cell differentiation anterior/posterior pattern specification negative regulation of cell population proliferation apoptotic process post-translational protein modification hemopoiesis positive regulation of transcription by RNA polymerase II Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 7704 235320 Ensembl ENSG00000109906 ENSMUSG00000066687 UniProt Q05516 Q3UQ17 RefSeq (mRNA) NM_001018011 NM_006006 NM_001354750 NM_001354751 NM_001354752 NM_001033324 NM_001364543 RefSeq (protein) NP_001018011 NP_005997 NP_001341679 NP_001341680 NP_001341681 NP_001028496 NP_001351472 Location (UCSC) Chr 11: 114.06 – 114.26 Mb Chr 9: 48.57 – 48.75 Mb PubMed search [3] [4]
Wikidata
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Zinc finger and BTB domain-containing protein 16 is a protein that in humans is encoded by the ZBTB16 gene.

Function

This gene is a member of the Krueppel C2H2-type zinc-finger protein family and encodes a zinc finger transcription factor that contains nine Kruppel-type zinc finger domains at the carboxyl terminus. This protein is located in the nucleus, is involved in cell cycle progression, and interacts with a histone deacetylase. Specific instances of aberrant gene rearrangement at this locus have been associated with acute promyelocytic leukemia (APL) ^[5] and physiological roles have been identified in mouse Natural Killer T cells ^{[6] [7]} and gamma-delta T cells. ^[8] Alternate transcriptional splice variants have been characterized in human. ^{[9] [10]}

Interactions

Zinc finger and BTB domain-containing protein 16 has been shown to interact with:

• Angiotensin II receptor type 1, ^[11]
• BCL6, ^[12]
• BMI1, ^[13]
• Calcitriol receptor, ^{[14] [15]}
• FHL2, ^[16]
• GATA1, ^[17]
• GATA2, ^[18]
• HDAC1, ^{[19] [20] [21]}
• HDAC4, ^{[19] [22]}
• HDAC5, ^{[19] [22]}
• HDAC6, ^[19]
• Heparin-binding EGF-like growth factor, ^{[23] [24]}
• Nuclear receptor co-repressor 2, ^{[21] [25] [26]}
• Promyelocytic leukemia protein ^[27]
• RUNX1T1, ^{[28] [29]}
• Retinoic acid receptor alpha, ^[30]
• SIN3A, ^{[14] [20] [21]}
• SIN3B, ^[20] and
• ZBTB32. ^[31]

See also

• Zbtb7

References

1. GRCh38: Ensembl release 89: ENSG00000109906 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000066687 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Chen Z, Brand NJ, Chen A, Chen SJ, Tong JH, Wang ZY, Waxman S, Zelent A (1993). "Fusion between a novel Krüppel-like zinc finger gene and the retinoic acid receptor-alpha locus due to a variant t(11;17) translocation associated with acute promyelocytic leukaemia". The EMBO Journal. 12 (3): 1161–7. doi:10.1002/j.1460-2075.1993.tb05757.x. PMC   413318 . PMID   8384553.
6. Kovalovsky D, Uche OU, Eladad S, Hobbs RM, Yi W, Alonzo E, Chua K, Eidson M, et al. (2008). "The BTB-zinc finger transcriptional regulator, PLZF, controls the development of iNKT cell effector functions". Nature Immunology. 9 (9): 1055–64. doi:10.1038/ni.1641. PMC   2662733 . PMID   18660811.
7. Savage AK, Constantinides MG, Han J, Picard D, Martin E, Li B, Lantz O, Bendelac A (2008). "The transcription factor PLZF (Zbtb16) directs the effector program of the NKT cell lineage". Immunity. 29 (3): 391–403. doi:10.1016/j.immuni.2008.07.011. PMC   2613001 . PMID   18703361.
8. Kreslavsky T, Savage AK, Hobbs R, Gounari F, Bronson R, Pereira P, Pandolfi PP, Bendelac A, von Boehmer H (2009). "TCR-inducible PLZF transcription factor required for innate phenotype of a subset of γδ T cells with restricted TCR diversity". Proceedings of the National Academy of Sciences of the United States of America. 106 (30): 12453–8. Bibcode:2009PNAS..10612453K. doi: 10.1073/pnas.0903895106 . PMC   2718370 . PMID   19617548.
9. Zhang T, Xiong H, Kan LX, Zhang CK, Jiao XF, Fu G, Zhang QH, Lu L, et al. (1999). "Genomic sequence, structural organization, molecular evolution, and aberrant rearrangement of promyelocytic leukemia zinc finger gene". Proceedings of the National Academy of Sciences of the United States of America. 96 (20): 11422–7. Bibcode:1999PNAS...9611422Z. doi: 10.1073/pnas.96.20.11422 . PMC   18049 . PMID   10500192.
10. "ZBTB16 zinc finger and BTB domain containing 16". Entrez . 4 October 2009. Retrieved 10 October 2009.
11. Senbonmatsu T, Saito T, Landon EJ, Watanabe O, Price E, Roberts RL, Imboden H, Fitzgerald TG, et al. (2003). "A novel angiotensin II type 2 receptor signaling pathway: possible role in cardiac hypertrophy". EMBO J. 22 (24): 6471–82. doi:10.1093/emboj/cdg637. PMC   291832 . PMID   14657020.
12. Dhordain P, Albagli O, Honore N, Guidez F, Lantoine D, Schmid M, The HD, Zelent A, Koken MH (2000). "Colocalization and heteromerization between the two human oncogene POZ/zinc finger proteins, LAZ3 (BCL6) and PLZF". Oncogene. 19 (54): 6240–50. doi:10.1038/sj.onc.1203976. PMID   11175338. S2CID   23619694.
13. Barna M, Merghoub T, Costoya JA, Ruggero D, Branford M, Bergia A, Samori B, Pandolfi PP (2002). "Plzf mediates transcriptional repression of HoxD gene expression through chromatin remodeling". Dev. Cell. 3 (4): 499–510. doi: 10.1016/s1534-5807(02)00289-7 . PMID   12408802.
14. Ward JO, McConnell MJ, Carlile GW, Pandolfi PP, Licht JD, Freedman LP (2001). "The acute promyelocytic leukemia-associated protein, promyelocytic leukemia zinc finger, regulates 1,25-dihydroxyvitamin D(3)-induced monocytic differentiation of U937 cells through a physical interaction with vitamin D(3) receptor". Blood. 98 (12): 3290–300. doi: 10.1182/blood.v98.12.3290 . PMID   11719366.
15. Puccetti E, Obradovic D, Beissert T, Bianchini A, Washburn B, Chiaradonna F, Boehrer S, Hoelzer D, et al. (2002). "AML-associated translocation products block vitamin D(3)-induced differentiation by sequestering the vitamin D(3) receptor". Cancer Res. 62 (23): 7050–8. PMID   12460926.
16. McLoughlin P, Ehler E, Carlile G, Licht JD, Schäfer BW (2002). "The LIM-only protein DRAL/FHL2 interacts with and is a corepressor for the promyelocytic leukemia zinc finger protein". J. Biol. Chem. 277 (40): 37045–53. doi: 10.1074/jbc.M203336200 . PMID   12145280.
17. Labbaye C, Quaranta MT, Pagliuca A, Militi S, Licht JD, Testa U, Peschle C (2002). "PLZF induces megakaryocytic development, activates Tpo receptor expression and interacts with GATA1 protein". Oncogene. 21 (43): 6669–79. doi: 10.1038/sj.onc.1205884 . PMID   12242665.
18. Tsuzuki S, Enver T (2002). "Interactions of GATA-2 with the promyelocytic leukemia zinc finger (PLZF) protein, its homologue FAZF, and the t(11;17)-generated PLZF-retinoic acid receptor alpha oncoprotein". Blood. 99 (9): 3404–10. doi: 10.1182/blood.v99.9.3404 . PMID   11964310.
19. Chauchereau A, Mathieu M, de Saintignon J, Ferreira R, Pritchard LL, Mishal Z, Dejean A, Harel-Bellan A (2004). "HDAC4 mediates transcriptional repression by the acute promyelocytic leukaemia-associated protein PLZF". Oncogene. 23 (54): 8777–84. doi:10.1038/sj.onc.1208128. PMID   15467736. S2CID   26092755.
20. David G, Alland L, Hong SH, Wong CW, DePinho RA, Dejean A (1998). "Histone deacetylase associated with mSin3A mediates repression by the acute promyelocytic leukemia-associated PLZF protein". Oncogene. 16 (19): 2549–56. doi:10.1038/sj.onc.1202043. PMID   9627120. S2CID   655636.
21. Wong CW, Privalsky ML (1998). "Components of the SMRT corepressor complex exhibit distinctive interactions with the POZ domain oncoproteins PLZF, PLZF-RARalpha, and BCL-6". J. Biol. Chem. 273 (42): 27695–702. doi: 10.1074/jbc.273.42.27695 . PMID   9765306.
22. Lemercier C, Brocard MP, Puvion-Dutilleul F, Kao HY, Albagli O, Khochbin S (2002). "Class II histone deacetylases are directly recruited by BCL6 transcriptional repressor" (PDF). J. Biol. Chem. 277 (24): 22045–52. doi: 10.1074/jbc.M201736200 . PMID   11929873. S2CID   19024903.
23. Nanba D, Mammoto A, Hashimoto K, Higashiyama S (2003). "Proteolytic release of the carboxy-terminal fragment of proHB-EGF causes nuclear export of PLZF". J. Cell Biol. 163 (3): 489–502. doi:10.1083/jcb.200303017. PMC   2173632 . PMID   14597771.
24. Nanba D, Toki F, Higashiyama S (2004). "Roles of charged amino acid residues in the cytoplasmic domain of proHB-EGF". Biochem. Biophys. Res. Commun. 320 (2): 376–82. Bibcode:2004BBRC..320..376N. doi:10.1016/j.bbrc.2004.05.176. PMID   15219838.
25. Takahashi S, McConnell MJ, Harigae H, Kaku M, Sasaki T, Melnick AM, Licht JD (2004). "The Flt3 internal tandem duplication mutant inhibits the function of transcriptional repressors by blocking interactions with SMRT". Blood. 103 (12): 4650–8. doi: 10.1182/blood-2003-08-2759 . PMID   14982881.
26. Hong SH, David G, Wong CW, Dejean A, Privalsky ML (1997). "SMRT corepressor interacts with PLZF and with the PML-retinoic acid receptor alpha (RARalpha) and PLZF-RARalpha oncoproteins associated with acute promyelocytic leukemia". Proc. Natl. Acad. Sci. U.S.A. 94 (17): 9028–33. Bibcode:1997PNAS...94.9028H. doi: 10.1073/pnas.94.17.9028 . PMC   23013 . PMID   9256429.
27. Koken MH, Reid A, Quignon F, Chelbi-Alix MK, Davies JM, Kabarowski JH, Zhu J, Dong S, et al. (1997). "Leukemia-associated retinoic acid receptor alpha fusion partners, PML and PLZF, heterodimerize and colocalize to nuclear bodies". Proc. Natl. Acad. Sci. U.S.A. 94 (19): 10255–60. Bibcode:1997PNAS...9410255K. doi: 10.1073/pnas.94.19.10255 . PMC   23349 . PMID   9294197.
28. Melnick AM, Westendorf JJ, Polinger A, Carlile GW, Arai S, Ball HJ, Lutterbach B, Hiebert SW, Licht JD (2000). "The ETO protein disrupted in t(8;21)-associated acute myeloid leukemia is a corepressor for the promyelocytic leukemia zinc finger protein". Mol. Cell. Biol. 20 (6): 2075–86. doi:10.1128/mcb.20.6.2075-2086.2000. PMC   110824 . PMID   10688654.
29. Melnick A, Carlile GW, McConnell MJ, Polinger A, Hiebert SW, Licht JD (2000). "AML-1/ETO fusion protein is a dominant negative inhibitor of transcriptional repression by the promyelocytic leukemia zinc finger protein". Blood. 96 (12): 3939–47. doi:10.1182/blood.V96.12.3939. PMID   11090081.
30. Martin PJ, Delmotte MH, Formstecher P, Lefebvre P (2003). "PLZF is a negative regulator of retinoic acid receptor transcriptional activity". Nucl. Recept. 1 (1) 6. doi: 10.1186/1478-1336-1-6 . PMC   212040 . PMID   14521715.
31. Hoatlin ME, Zhi Y, Ball H, Silvey K, Melnick A, Stone S, Arai S, Hawe N, et al. (1999). "A novel BTB/POZ transcriptional repressor protein interacts with the Fanconi anemia group C protein and PLZF". Blood. 94 (11): 3737–47. doi:10.1182/blood.V94.11.3737. PMID   10572087.

Further reading

• Chen Z, Brand NJ, Chen A, Chen SJ, Tong JH, Wang ZY, Waxman S, Zelent A (1993). "Fusion between a novel Krüppel-like zinc finger gene and the retinoic acid receptor-alpha locus due to a variant t(11;17) translocation associated with acute promyelocytic leukaemia". The EMBO Journal. 12 (3): 1161–7. doi:10.1002/j.1460-2075.1993.tb05757.x. PMC   413318 . PMID   8384553.
• Chen SJ, Zelent A, Tong JH, Yu HQ, Wang ZY, Derré J, Berger R, Waxman S, Chen Z (1993). "Rearrangements of the retinoic acid receptor alpha and promyelocytic leukemia zinc finger genes resulting from t(11;17)(q23;q21) in a patient with acute promyelocytic leukemia". The Journal of Clinical Investigation. 91 (5): 2260–7. doi:10.1172/JCI116453. PMC   288229 . PMID   8387545.
• Reid A, Gould A, Brand N, Cook M, Strutt P, Li J, Licht J, Waxman S, et al. (1995). "Leukemia translocation gene, PLZF, is expressed with a speckled nuclear pattern in early hematopoietic progenitors". Blood. 86 (12): 4544–52. doi: 10.1182/blood.V86.12.4544.bloodjournal86124544 . PMID   8541544.
• Dong S, Zhu J, Reid A, Strutt P, Guidez F, Zhong HJ, Wang ZY, Licht J, et al. (1996). "Amino-terminal protein-protein interaction motif (POZ-domain) is responsible for activities of the promyelocytic leukemia zinc finger-retinoic acid receptor-alpha fusion protein". Proceedings of the National Academy of Sciences of the United States of America. 93 (8): 3624–9. Bibcode:1996PNAS...93.3624D. doi: 10.1073/pnas.93.8.3624 . PMC   39661 . PMID   8622986.
• Bonaldo MF, Lennon G, Soares MB (1996). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Research. 6 (9): 791–806. doi: 10.1101/gr.6.9.791 . PMID   8889548.
• Hong SH, David G, Wong CW, Dejean A, Privalsky ML (1997). "SMRT corepressor interacts with PLZF and with the PML-retinoic acid receptor α (RARα) and PLZF-RARα oncoproteins associated with acute promyelocytic leukemia". Proceedings of the National Academy of Sciences of the United States of America. 94 (17): 9028–33. Bibcode:1997PNAS...94.9028H. doi: 10.1073/pnas.94.17.9028 . PMC   23013 . PMID   9256429.
• Koken MH, Reid A, Quignon F, Chelbi-Alix MK, Davies JM, Kabarowski JH, Zhu J, Dong S, et al. (1997). "Leukemia-associated retinoic acid receptor α fusion partners, PML and PLZF, heterodimerize and colocalize to nuclear bodies". Proceedings of the National Academy of Sciences of the United States of America. 94 (19): 10255–60. Bibcode:1997PNAS...9410255K. doi: 10.1073/pnas.94.19.10255 . PMC   23349 . PMID   9294197.
• Lin RJ, Nagy L, Inoue S, Shao W, Miller WH, Evans RM (1998). "Role of the histone deacetylase complex in acute promyelocytic leukaemia". Nature. 391 (6669): 811–4. Bibcode:1998Natur.391..811L. doi: 10.1038/35895 . PMID   9486654. S2CID   4383951.
• Guidez F, Ivins S, Zhu J, Söderström M, Waxman S, Zelent A (1998). "Reduced retinoic acid-sensitivities of nuclear receptor corepressor binding to PML- and PLZF-RARalpha underlie molecular pathogenesis and treatment of acute promyelocytic leukemia". Blood. 91 (8): 2634–42. doi: 10.1182/blood.V91.8.2634.2634_2634_2642 . PMID   9531570.
• David G, Alland L, Hong SH, Wong CW, DePinho RA, Dejean A (1998). "Histone deacetylase associated with mSin3A mediates repression by the acute promyelocytic leukemia-associated PLZF protein". Oncogene. 16 (19): 2549–56. doi:10.1038/sj.onc.1202043. PMID   9627120. S2CID   655636.
• Ahmad KF, Engel CK, Privé GG (1998). "Crystal structure of the BTB domain from PLZF". Proceedings of the National Academy of Sciences of the United States of America. 95 (21): 12123–8. Bibcode:1998PNAS...9512123F. doi: 10.1073/pnas.95.21.12123 . PMC   22795 . PMID   9770450.
• van Schothorst EM, Prins DE, Baysal BE, Beekman M, Licht JD, Waxman S, Zelent A, Cornelisse CJ, et al. (1999). "Genomic structure of the human PLZF gene". Gene. 236 (1): 21–4. doi:10.1016/S0378-1119(99)00277-2. PMID   10433962.
• Ball HJ, Melnick A, Shaknovich R, Kohanski RA, Licht JD (1999). "The promyelocytic leukemia zinc finger (PLZF) protein binds DNA in a high molecular weight complex associated with cdc2 kinase". Nucleic Acids Research. 27 (20): 4106–13. doi:10.1093/nar/27.20.4106. PMC   148680 . PMID   10497277.
• Zhang T, Xiong H, Kan LX, Zhang CK, Jiao XF, Fu G, Zhang QH, Lu L, et al. (1999). "Genomic sequence, structural organization, molecular evolution, and aberrant rearrangement of promyelocytic leukemia zinc finger gene". Proceedings of the National Academy of Sciences of the United States of America. 96 (20): 11422–7. Bibcode:1999PNAS...9611422Z. doi: 10.1073/pnas.96.20.11422 . PMC   18049 . PMID   10500192.
• Li X, Peng H, Schultz DC, Lopez-Guisa JM, Rauscher FJ, Marmorstein R (1999). "Structure-function studies of the BTB/POZ transcriptional repression domain from the promyelocytic leukemia zinc finger oncoprotein". Cancer Research. 59 (20): 5275–82. PMID   10537309.
• Hoatlin ME, Zhi Y, Ball H, Silvey K, Melnick A, Stone S, Arai S, Hawe N, et al. (1999). "A novel BTB/POZ transcriptional repressor protein interacts with the Fanconi anemia group C protein and PLZF". Blood. 94 (11): 3737–47. doi:10.1182/blood.V94.11.3737. PMID   10572087.
• Melnick AM, Westendorf JJ, Polinger A, Carlile GW, Arai S, Ball HJ, Lutterbach B, Hiebert SW, Licht JD (2000). "The ETO Protein Disrupted in t(8;21)-Associated Acute Myeloid Leukemia Is a Corepressor for the Promyelocytic Leukemia Zinc Finger Protein". Molecular and Cellular Biology. 20 (6): 2075–86. doi:10.1128/MCB.20.6.2075-2086.2000. PMC   110824 . PMID   10688654.
• Hyman J, Chen H, Di Fiore PP, De Camilli P, Brunger AT (2000). "Epsin 1 Undergoes Nucleocytosolic Shuttling and Its Eps15 Interactor Nh2-Terminal Homology (Enth) Domain, Structurally Similar to Armadillo and Heat Repeats, Interacts with the Transcription Factor Promyelocytic Leukemia Zn2+ Finger Protein (Plzf)". The Journal of Cell Biology. 149 (3): 537–46. doi:10.1083/jcb.149.3.537. PMC   2174850 . PMID   10791968.
• Melnick A, Carlile GW, McConnell MJ, Polinger A, Hiebert SW, Licht JD (2000). "AML-1/ETO fusion protein is a dominant negative inhibitor of transcriptional repression by the promyelocytic leukemia zinc finger protein". Blood. 96 (12): 3939–47. doi:10.1182/blood.V96.12.3939. PMID   11090081.
• Beez S, Demmer P, Puccetti E (2012). "Targeting the Acute Promyelocytic Leukemia-Associated Fusion Proteins PML/RARα and PLZF/RARα with Interfering Peptides". PLOS ONE. 7 (11) e48636. Bibcode:2012PLoSO...748636B. doi: 10.1371/journal.pone.0048636 . PMC   3494703 . PMID   23152790.
• He LZ, Bhaumik M, Tribioli C, Rego EM, Ivins S, Zelent A, Pandolfi PP (2000). "Two critical hits for promyelocytic leukemia". Molecular Cell. 6 (5): 1131–41. doi: 10.1016/S1097-2765(00)00111-8 . PMID   11106752.

External links

• ZBTB16+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.