FOXA3

FOXA3
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1VTN
Identifiers
Aliases	FOXA3 , FKHH3, HNF3G, TCF3G, forkhead box A3
External IDs	OMIM: 602295; MGI: 1347477; HomoloGene: 3308; GeneCards: FOXA3; OMA:FOXA3 - orthologs
Gene location (Human) Chr. Chromosome 19 (human) [1] Band 19q13.32 Start 45,863,989 bp [1] End 45,873,797 bp [1]
Gene location (Mouse) Chr. Chromosome 7 (mouse) [2] Band 7 A3|7 9.46 cM Start 18,747,209 bp [2] End 18,757,463 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in mucosa of ileum right lobe of liver pancreatic ductal cell mucosa of transverse colon body of pancreas mucosa of sigmoid colon rectum cartilage tissue islet of Langerhans palpebral conjunctiva Top expressed in mucous cell of stomach crypt of lieberkuhn of small intestine epithelium of stomach pyloric antrum liver left lobe of liver large intestine left colon yolk sac Hindgut More reference expression data BioGPS n/a
Gene ontology Molecular function DNA-binding transcription factor activity sequence-specific DNA binding DNA binding transcription factor binding protein domain specific binding DNA-binding transcription factor activity, RNA polymerase II-specific Cellular component nucleoplasm actin cytoskeleton nucleus Biological process cellular glucose homeostasis regulation of transcription by RNA polymerase II cellular response to starvation multicellular organism development regulation of transcription, DNA-templated transcription, DNA-templated spermatogenesis positive regulation of transcription by RNA polymerase II anatomical structure morphogenesis cell differentiation chromatin organization Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 3171 15377 Ensembl ENSG00000170608 ENSMUSG00000040891 UniProt P55318 P35584 RefSeq (mRNA) NM_004497 NM_008260 RefSeq (protein) NP_004488 NP_032286 Location (UCSC) Chr 19: 45.86 – 45.87 Mb Chr 7: 18.75 – 18.76 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Hepatocyte nuclear factor 3-gamma (HNF-3G), also known as forkhead box protein A3 (FOXA3) or transcription factor 3G (TCF-3G) is a protein that in humans is encoded by the FOXA3 gene. ^{[5] [6]}

Function

HNF-3G is a member of the forkhead class of DNA-binding proteins. These hepatocyte nuclear factors are transcriptional activators for liver-specific transcripts such as albumin and transthyretin, and they also interact with chromatin. Similar family members in mice have roles in the regulation of metabolism and in the differentiation of the pancreas and liver. ^[5]

References

1. GRCh38: Ensembl release 89: ENSG00000170608 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000040891 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: forkhead box A3".
6. Mincheva A, Lichter P, Schütz G, Kaestner KH (February 1997). "Assignment of the human genes for hepatocyte nuclear factor 3-alpha, -beta, and -gamma (HNF3A, HNF3B, HNF3G) to 14q12-q13, 20p11, and 19q13.2-q13.4". Genomics. 39 (3): 417–9. doi:10.1006/geno.1996.4477. PMID   9119385.

Further reading

• Corrocher R, Tedesco F, Rabusin P, De Sandre G (1975). "Effect of human erythrocyte stromata on complement activation". Br. J. Haematol. 29 (2): 235–41. doi:10.1111/j.1365-2141.1975.tb01817.x. PMID   33. S2CID   45491647.
• Verschuur M, de Jong M, Felida L, et al. (2005). "A hepatocyte nuclear factor-3 site in the fibrinogen beta promoter is important for interleukin 6-induced expression, and its activity is influenced by the adjacent -148C/T polymorphism" (PDF). J. Biol. Chem. 280 (17): 16763–71. doi: 10.1074/jbc.M501973200 . PMID   15737987.
• Clark KL, Halay ED, Lai E, Burley SK (1993). "Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5". Nature. 364 (6436): 412–20. Bibcode:1993Natur.364..412C. doi:10.1038/364412a0. PMID   8332212. S2CID   4363526.
• Qian X, Costa RH (1995). "Analysis of hepatocyte nuclear factor-3 beta protein domains required for transcriptional activation and nuclear targeting". Nucleic Acids Res. 23 (7): 1184–91. doi:10.1093/nar/23.7.1184. PMC   306829 . PMID   7739897.
• Rodríguez-Antona C, Bort R, Jover R, et al. (2003). "Transcriptional regulation of human CYP3A4 basal expression by CCAAT enhancer-binding protein alpha and hepatocyte nuclear factor-3 gamma". Mol. Pharmacol. 63 (5): 1180–9. doi:10.1124/mol.63.5.1180. PMID   12695546. S2CID   34628968.
• Lamba V, Panetta JC, Strom S, Schuetz EG (2010). "Genetic predictors of interindividual variability in hepatic CYP3A4 expression". J. Pharmacol. Exp. Ther. 332 (3): 1088–99. doi:10.1124/jpet.109.160804. PMC   2835441 . PMID   19934400.
• Hori Y, Gu X, Xie X, Kim SK (2005). "Differentiation of insulin-producing cells from human neural progenitor cells". PLOS Med. 2 (4): e103. doi: 10.1371/journal.pmed.0020103 . PMC   1087208 . PMID   15839736.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Motallebipour M, Ameur A, Reddy Bysani MS, et al. (2009). "Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seq". Genome Biol. 10 (11): R129. doi: 10.1186/gb-2009-10-11-r129 . PMC   3091322 . PMID   19919681.
• Zhou B, Zhong Q, Minoo P, et al. (2008). "Foxp2 inhibits Nkx2.1-mediated transcription of SP-C via interactions with the Nkx2.1 homeodomain". Am. J. Respir. Cell Mol. Biol. 38 (6): 750–8. doi:10.1165/rcmb.2007-0350OC. PMC   2396252 . PMID   18239190.
• Navas MA, Vaisse C, Boger S, et al. (2000). "The human HNF-3 genes: cloning, partial sequence and mutation screening in patients with impaired glucose homeostasis". Hum. Hered. 50 (6): 370–81. doi:10.1159/000022943. PMID   10899756. S2CID   24745151.
• Kaestner KH (2000). "The hepatocyte nuclear factor 3 (HNF3 or FOXA) family in metabolism". Trends Endocrinol. Metab. 11 (7): 281–5. doi:10.1016/S1043-2760(00)00271-X. PMID   10920385. S2CID   40600315.
• Lin B, Morris DW, Chou JY (1997). "The role of HNF1alpha, HNF3gamma, and cyclic AMP in glucose-6-phosphatase gene activation". Biochemistry. 36 (46): 14096–106. doi:10.1021/bi9703249. PMID   9369482.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Dintilhac A, Bernués J (2002). "HMGB1 interacts with many apparently unrelated proteins by recognizing short amino acid sequences". J. Biol. Chem. 277 (9): 7021–8. doi: 10.1074/jbc.M108417200 . hdl: 10261/112516 . PMID   11748221.
• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Kaestner KH, Hiemisch H, Schütz G (1998). "Targeted disruption of the gene encoding hepatocyte nuclear factor 3gamma results in reduced transcription of hepatocyte-specific genes". Mol. Cell. Biol. 18 (7): 4245–51. doi:10.1128/mcb.18.7.4245. PMC   109008 . PMID   9632808.
• Hromas R, Moore J, Johnston T, et al. (1993). "Drosophila forkhead homologues are expressed in a lineage-restricted manner in human hematopoietic cells". Blood. 81 (11): 2854–9. doi: 10.1182/blood.V81.11.2854.2854 . PMID   8499623.

External links

• Overview of all the structural information available in the PDB for UniProt : P55318 (Hepatocyte nuclear factor 3-gamma) at the PDBe-KB .

This article incorporates text from the United States National Library of Medicine, which is in the public domain.