SOX18

SOX18
Identifiers
Aliases	SOX18 , HLTS, HLTRS, SRY-box 18, SRY-box transcription factor 18
External IDs	OMIM: 601618; MGI: 103559; HomoloGene: 7546; GeneCards: SOX18; OMA:SOX18 - orthologs
Gene location (Human) Chr. Chromosome 20 (human) [1] Band 20q13.33 Start 64,047,582 bp [1] End 64,049,639 bp [1]
Gene location (Mouse) Chr. Chromosome 2 (mouse) [2] Band 2 H4|2 103.71 cM Start 181,311,629 bp [2] End 181,313,433 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in apex of heart right lung left uterine tube right auricle of heart right lobe of thyroid gland left ventricle right coronary artery gastric mucosa body of uterus left coronary artery Top expressed in interventricular septum glomerular capillary right lung endothelial cell of lymphatic vessel left lung right lung lobe external carotid artery left lung lobe lactiferous gland internal carotid artery More reference expression data BioGPS More reference expression data
Gene ontology Molecular function DNA binding sequence-specific DNA binding DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific RNA polymerase II cis-regulatory region sequence-specific DNA binding protein heterodimerization activity DNA-binding transcription factor activity, RNA polymerase II-specific Cellular component nucleus Biological process hair follicle development establishment of endothelial barrier hair cycle process regulation of transcription, DNA-templated stem cell fate specification lymphangiogenesis blood vessel endothelial cell migration lymphatic endothelial cell differentiation endocardium formation outflow tract morphogenesis mRNA transcription by RNA polymerase II in utero embryonic development negative regulation of transcription by RNA polymerase II cell maturation endocardial cell differentiation lymph vessel development transcription, DNA-templated embryonic heart tube development vasculogenesis positive regulation of transcription, DNA-templated heart looping heart development vasculature development blood vessel development angiogenesis negative regulation of transcription, DNA-templated regulation of stem cell proliferation positive regulation of transcription by RNA polymerase II cell differentiation Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 54345 20672 Ensembl ENSG00000203883 ENSMUSG00000046470 UniProt P35713 P43680 RefSeq (mRNA) NM_018419 NM_009236 RefSeq (protein) NP_060889 NP_033262 Location (UCSC) Chr 20: 64.05 – 64.05 Mb Chr 2: 181.31 – 181.31 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Transcription factor SOX-18 is a protein that in humans is encoded by the SOX18 gene. ^{[5] [6]}

Function

This gene encodes a member of the SOX (SRY-related HMG-box) family of transcription factors involved in the regulation of embryonic development and in the determination of the cell fate. The encoded protein may act as a transcriptional regulator after forming a protein complex with other proteins. This protein plays a role in hair, blood vessel, and lymphatic vessel development. Mutations in this gene have been associated with recessive and dominant forms of hypotrichosis-lymphedema-telangiectasia (HLTS). ^{[7] [6]} An autosomal truncating dominant mutation in this gene has also been associated with renal failure in the condition hypotrichosis-lymphedema-telangiectasia-renal defect syndrome (HLTRS). ^{[8] [9]}

Interactions

SOX18 has been shown to interact with:

MEF2C ^[10]

RBPJ ^[11]

See also

• SOX genes

References

1. GRCh38: Ensembl release 89: ENSG00000203883 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000046470 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Azuma T, Seki N, Yoshikawa T, Saito T, Masuho Y, Muramatsu M (July 2000). "cDNA cloning, tissue expression, and chromosome mapping of human homolog of SOX18". Journal of Human Genetics. 45 (3): 192–5. doi: 10.1007/s100380050210 . PMID   10807548.
6. "Entrez Gene: SO X18 SRY (sex determining region Y)-box 18".
7. Valenzuela I, Fernández-Alvarez P, Plaja A, Ariceta G, Sabaté-Rotés A, García-Arumí E, Vendrell T, Tizzano E (May 2018). "Further delineation of the SOX18-related Hypotrichosis, Lymphedema, Telangiectasia syndrome (HTLS)". European Journal of Medical Genetics. 61 (5): 269–272. doi:10.1016/j.ejmg.2018.01.001. PMID   29307792.
8. Moalem S, Brouillard P, Kuypers D, Legius E, Harvey E, Taylor G, Francois M, Vikkula M, Chitayat D (April 2015). "Hypotrichosis-lymphedema-telangiectasia-renal defect associated with a truncating mutation in the SOX18 gene". Clinical Genetics. 87 (4): 378–82. doi:10.1111/cge.12388. PMID   24697860. S2CID   32417398.
9. "Hypotrichosis-Lymphedema-Telangiectasia-Renal Defect Syndrome". The University of Arizona Health Sciences.
10. Hosking BM, Wang SC, Chen SL, Penning S, Koopman P, Muscat GE (September 2001). "SOX18 directly interacts with MEF2C in endothelial cells". Biochemical and Biophysical Research Communications. 287 (2): 493–500. doi:10.1006/bbrc.2001.5589. PMID   11554755.
11. Overman J, Fontaine F, Wylie-Sears J, Moustaqil M, Huang L, Meurer M, et al. (July 2019). "R-propranolol is a small molecule inhibitor of the SOX18 transcription factor in a rare vascular syndrome and hemangioma". eLife. 8: e43026. doi: 10.7554/eLife.43026 . PMC   6667216 . PMID   31358114.

Further reading

• Wilson M, Koopman P (August 2002). "Matching SOX: partner proteins and co-factors of the SOX family of transcriptional regulators". Current Opinion in Genetics & Development. 12 (4): 441–6. doi:10.1016/S0959-437X(02)00323-4. PMID   12100890.
• Schepers GE, Teasdale RD, Koopman P (August 2002). "Twenty pairs of sox: extent, homology, and nomenclature of the mouse and human sox transcription factor gene families". Developmental Cell. 3 (2): 167–70. doi: 10.1016/S1534-5807(02)00223-X . PMID   12194848.
• Denny P, Swift S, Brand N, Dabhade N, Barton P, Ashworth A (June 1992). "A conserved family of genes related to the testis determining gene, SRY". Nucleic Acids Research. 20 (11): 2887. doi:10.1093/nar/20.11.2887. PMC   336939 . PMID   1614875.
• Dunn TL, Mynett-Johnson L, Wright EM, Hosking BM, Koopman PA, Muscat GE (August 1995). "Sequence and expression of Sox-18 encoding a new HMG-box transcription factor". Gene. 161 (2): 223–5. doi:10.1016/0378-1119(95)00280-J. PMID   7665083.
• Stanojcić S, Stevanović M (June 2000). "The human SOX18 gene: cDNA cloning and high resolution mapping". Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression. 1492 (1): 237–41. doi:10.1016/s0167-4781(00)00078-6. PMID   10858556.
• Pennisi DJ, James KM, Hosking B, Muscat GE, Koopman P (December 2000). "Structure, mapping, and expression of human SOX18" . Mammalian Genome. 11 (12): 1147–9. doi:10.1007/s003350010216. PMID   11130989. S2CID   11826232.
• Hosking BM, Wang SC, Chen SL, Penning S, Koopman P, Muscat GE (September 2001). "SOX18 directly interacts with MEF2C in endothelial cells". Biochemical and Biophysical Research Communications. 287 (2): 493–500. doi:10.1006/bbrc.2001.5589. PMID   11554755.
• Dintilhac A, Bernués J (March 2002). "HMGB1 interacts with many apparently unrelated proteins by recognizing short amino acid sequences". The Journal of Biological Chemistry. 277 (9): 7021–8. doi: 10.1074/jbc.M108417200 . hdl: 10261/112516 . PMID   11748221.
• Saitoh T, Katoh M (September 2002). "Expression of human SOX18 in normal tissues and tumors". International Journal of Molecular Medicine. 10 (3): 339–44. doi:10.3892/ijmm.10.3.339. PMID   12165811.
• Irrthum A, Devriendt K, Chitayat D, Matthijs G, Glade C, Steijlen PM, Fryns JP, Van Steensel MA, Vikkula M (June 2003). "Mutations in the transcription factor gene SOX18 underlie recessive and dominant forms of hypotrichosis-lymphedema-telangiectasia". American Journal of Human Genetics. 72 (6): 1470–8. doi:10.1086/375614. PMC   1180307 . PMID   12740761.
• García-Ramírez M, Martínez-González J, Juan-Babot JO, Rodríguez C, Badimon L (November 2005). "Transcription factor SOX18 is expressed in human coronary atherosclerotic lesions and regulates DNA synthesis and vascular cell growth". Arteriosclerosis, Thrombosis, and Vascular Biology. 25 (11): 2398–403. doi: 10.1161/01.ATV.0000187464.81959.23 . PMID   16179596.
• Young N, Hahn CN, Poh A, Dong C, Wilhelm D, Olsson J, Muscat GE, Parsons P, Gamble JR, Koopman P (August 2006). "Effect of disrupted SOX18 transcription factor function on tumor growth, vascularization, and endothelial development". Journal of the National Cancer Institute. 98 (15): 1060–7. doi: 10.1093/jnci/djj299 . PMID   16882943.
• Olbromski M, Podhorska-Okołów M, Dzięgiel P. (2018). "Role of the SOX18 protein in neoplastic processes". Oncology Letters. 16 (2): 1383–89. doi:10.3892/ol.2018.8819. PMC   6036441 . PMID   30008814.

External links

• SOX18+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.